RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 EXOC5O00471 708 aa16.02■□□□□ 0.15
VAPA-202ENST00000400000 CUL5Q93034 780 aa16.02■□□□□ 0.15
VAPA-202ENST00000400000 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
VAPA-202ENST00000400000 IFIT3O14879 490 aaKnown RBP16.02■□□□□ 0.15
VAPA-202ENST00000400000 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.15
VAPA-202ENST00000400000 TCERG1LQ5VWI1 586 aa16.02■□□□□ 0.15
VAPA-202ENST00000400000 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.15
VAPA-202ENST00000400000 GSTTP1A0A1W2PQM5 241 aa16.01■□□□□ 0.15
VAPA-202ENST00000400000 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
VAPA-202ENST00000400000 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
VAPA-202ENST00000400000 TDRD12Q587J7 1177 aaKnown RBP16.01■□□□□ 0.15
VAPA-202ENST00000400000 ZNF354CQ86Y25 554 aa16.01■□□□□ 0.15
VAPA-202ENST00000400000 WDHD1O75717 1129 aaPredicted RBP16.01■□□□□ 0.15
VAPA-202ENST00000400000 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
VAPA-202ENST00000400000 GOLIM4O00461 696 aa16.01■□□□□ 0.15
VAPA-202ENST00000400000 SRRTQ9BXP5 876 aaKnown RBP16.01■□□□□ 0.15
VAPA-202ENST00000400000 ZNF213O14771 459 aa16■□□□□ 0.15
VAPA-202ENST00000400000 TFIP11Q9UBB9 837 aaKnown RBP16■□□□□ 0.15
VAPA-202ENST00000400000 POTEJP0CG39 1038 aa16■□□□□ 0.15
VAPA-202ENST00000400000 JAG2Q9Y219 1238 aa16■□□□□ 0.15
VAPA-202ENST00000400000 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
VAPA-202ENST00000400000 DPH6Q7L8W6 267 aa16■□□□□ 0.15
VAPA-202ENST00000400000 SLC5A1P13866 664 aa16■□□□□ 0.15
VAPA-202ENST00000400000 NFE2L2Q16236 605 aa16■□□□□ 0.15
VAPA-202ENST00000400000 C20orf194Q5TEA3 1177 aa16■□□□□ 0.15
VAPA-202ENST00000400000 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
VAPA-202ENST00000400000 GOLGA8BA8MQT2 603 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 PICALMQ13492 652 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 SSRP1Q08945 709 aaKnown RBP15.99■□□□□ 0.15
VAPA-202ENST00000400000 SPA17Q15506 151 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 TRERF1Q96PN7 1200 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 MX1P20591 662 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
VAPA-202ENST00000400000 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 A0A087WZG4 1122 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 WASF1Q92558 559 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 C8orf76Q96K31 380 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 TSG101Q99816 390 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 PPP1R12BO60237 982 aaPredicted RBP15.99■□□□□ 0.15
VAPA-202ENST00000400000 TRIM21P19474 475 aaKnown RBP15.99■□□□□ 0.15
VAPA-202ENST00000400000 CTNNA2P26232 953 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 CASQ1P31415 396 aa15.99■□□□□ 0.15
VAPA-202ENST00000400000 PLS1Q14651 629 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 AKAP2Q9Y2D5 859 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 MAP3K11Q16584 847 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 CTCFLQ8NI51 663 aaPredicted RBP15.98■□□□□ 0.15
VAPA-202ENST00000400000 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
VAPA-202ENST00000400000 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 AKNAD1Q5T1N1 836 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
VAPA-202ENST00000400000 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
VAPA-202ENST00000400000 ANKRD18BA2A2Z9 1011 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 KIF20AO95235 890 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 IDEP14735 1019 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 CCDC148Q8NFR7 591 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 UBAP1LF5GYI3 381 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 SYCP3Q8IZU3 236 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 BICD1Q96G01 975 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 TMCO5BA8MYB1 307 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
VAPA-202ENST00000400000 PRC1O43663 620 aa15.96■□□□□ 0.15
VAPA-202ENST00000400000 FKBP15Q5T1M5 1219 aa15.96■□□□□ 0.15
VAPA-202ENST00000400000 MICU3Q86XE3 530 aa15.96■□□□□ 0.15
VAPA-202ENST00000400000 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
VAPA-202ENST00000400000 POLR3GO15318 223 aaPredicted RBP15.96■□□□□ 0.15
VAPA-202ENST00000400000 URI1O94763 535 aaPredicted RBP15.96■□□□□ 0.15
VAPA-202ENST00000400000 NAIPQ13075 1403 aa15.96■□□□□ 0.14
VAPA-202ENST00000400000 WDR63Q8IWG1 891 aa15.96■□□□□ 0.14
VAPA-202ENST00000400000 CCDC150Q8NCX0 1101 aa15.96■□□□□ 0.14
VAPA-202ENST00000400000 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 ERLIN1O75477 346 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 IFFO1Q0D2I5 559 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 CNNM3Q8NE01 707 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 RAB11FIP3O75154 756 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 IQCA1Q86XH1 822 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 CCDC194A0A1B0GVG4 234 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 LUZP1Q86V48 1076 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 TICAM2Q86XR7 235 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 ZSWIM4Q9H7M6 989 aa15.95■□□□□ 0.14
VAPA-202ENST00000400000 KRT32Q14532 448 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
VAPA-202ENST00000400000 ZNF287Q9HBT7 754 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 POGZQ7Z3K3 1410 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 ZSCAN31Q96LW9 406 aaPredicted RBP15.94■□□□□ 0.14
VAPA-202ENST00000400000 KIF21BO75037 1637 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 CBX1P83916 185 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 RIMBP2O15034 1052 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms