RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 CTNNA2P26232 953 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 PRDM11Q9NQV5 511 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 RNF187Q5TA31 235 aaPredicted RBP15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 MCM5P33992 734 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 C6orf163Q5TEZ5 329 aa15.51■□□□□ 0.07
LDLRAD4-203ENST00000399848 FSD2A1L4K1 749 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 UBAP1LF5GYI3 381 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 EHBP1Q8NDI1 1231 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 FERMT1Q9BQL6 677 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 NKTRP30414 1462 aaKnown RBP15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 C9orf84Q5VXU9 1444 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 A0A087WZG4 1122 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 CTCFLQ8NI51 663 aaPredicted RBP15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 SMARCC1Q92922 1105 aaPredicted RBP15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 NAPBQ9H115 298 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 FCHSD2O94868 740 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 STARD3NLO95772 234 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 HLTFQ14527 1009 aaKnown RBP eCLIP15.5■□□□□ 0.076e-7■■■□□ 16.2
LDLRAD4-203ENST00000399848 STX1AQ16623 288 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
LDLRAD4-203ENST00000399848 TICAM2Q86XR7 235 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 FAM114A1Q8IWE2 563 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 IQCA1Q86XH1 822 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 MX1P20591 662 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 PIBF1Q8WXW3 757 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 EHMT1Q9H9B1 1298 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 POLR3GO15318 223 aaPredicted RBP15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 TNNT1P13805 278 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 CFAP70Q5T0N1 1121 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 MKNK2Q9HBH9 465 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 RTEL1-TNFRSF6BF6WH68 1400 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 CBX1P83916 185 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 CAVIN4Q5BKX8 364 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 CNNM3Q8NE01 707 aa15.49■□□□□ 0.07
LDLRAD4-203ENST00000399848 MACROD2A1Z1Q3 448 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 AMPD3Q01432 767 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 GRM1Q13255 1194 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 ZNF644Q9H582 1327 aaPredicted RBP15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 METTL24Q5JXM2 366 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 TDRD12Q587J7 1177 aaKnown RBP15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 DDX54Q8TDD1 881 aaKnown RBP15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 SREK1Q8WXA9 508 aaKnown RBP15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 ABCF2Q9UG63 623 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 CUL5Q93034 780 aa15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 DDX19AQ9NUU7 478 aaKnown RBP15.48■□□□□ 0.07
LDLRAD4-203ENST00000399848 FERP16591 822 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 IFI16Q16666 785 aaKnown RBP15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 SLC12A7Q9Y666 1083 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 C16orf45Q96MC5 204 aaPredicted RBP15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 RNF41Q9H4P4 317 aaPredicted RBP15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 KANK3Q6NY19 840 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 UBA5Q9GZZ9 404 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 TTC21AQ8NDW8 1320 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 IL1RAPL2Q9NP60 686 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 CEP112Q8N8E3 955 aa15.47■□□□□ 0.07
LDLRAD4-203ENST00000399848 DAPK1P53355 1430 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 CFAP57Q96MR6 1250 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 HOMER2Q9NSB8 354 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 IKBKGQ9Y6K9 419 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 STXBP4Q6ZWJ1 553 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 CCDC12Q8WUD4 166 aaPredicted RBP15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
LDLRAD4-203ENST00000399848 CFAP65Q6ZU64 1925 aaKnown RBP15.46■□□□□ 0.06
LDLRAD4-203ENST00000399848 POLR3DP05423 398 aaPredicted RBP15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 TMEM57Q8N5G2 664 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 FERMT2Q96AC1 680 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 MAP3K12Q12852 859 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 TSNARE1Q96NA8 513 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 CATIPQ7Z7H3 387 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 LIMCH1Q9UPQ0 1083 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 CALML4Q96GE6 196 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 MINDY4BA8MYZ0 360 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 SLF2Q8IX21 1173 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 CFTRP13569 1480 aa15.45■□□□□ 0.06
LDLRAD4-203ENST00000399848 MYO1BO43795 1136 aa15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 FERMT3Q86UX7 667 aa15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 CRACR2BQ8N4Y2 399 aaPredicted RBP15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 DYNC1I1O14576 645 aa15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 SNW1Q13573 536 aaKnown RBP15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 CCDC172P0C7W6 258 aa15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
LDLRAD4-203ENST00000399848 COMMD10Q9Y6G5 202 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms