RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 ZBTB1Q9Y2K1 713 aa23.78■■□□□ 1.4
SDR39U1-201ENST00000399395 UBR2Q8IWV8 1755 aa23.78■■□□□ 1.4
SDR39U1-201ENST00000399395 U2SURPO15042 1029 aaKnown RBP23.77■■□□□ 1.4
SDR39U1-201ENST00000399395 CHRNA5P30532 468 aa23.77■■□□□ 1.4
SDR39U1-201ENST00000399395 VSIG10Q8N0Z9 540 aa23.77■■□□□ 1.4
SDR39U1-201ENST00000399395 NARFQ9UHQ1 456 aa23.77■■□□□ 1.4
SDR39U1-201ENST00000399395 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
SDR39U1-201ENST00000399395 COL3A1P02461 1466 aaPredicted RBP23.76■■□□□ 1.39
SDR39U1-201ENST00000399395 TM4SF1P30408 202 aa23.76■■□□□ 1.39
SDR39U1-201ENST00000399395 TEFQ10587 303 aa23.75■■□□□ 1.39
SDR39U1-201ENST00000399395 GAS2L2Q8NHY3 880 aa23.75■■□□□ 1.39
SDR39U1-201ENST00000399395 TOMM70O94826 608 aa23.74■■□□□ 1.39
SDR39U1-201ENST00000399395 NFIXQ14938 502 aa23.74■■□□□ 1.39
SDR39U1-201ENST00000399395 NMRK2Q9NPI5 230 aa23.74■■□□□ 1.39
SDR39U1-201ENST00000399395 RNF181Q9P0P0 153 aa23.74■■□□□ 1.39
SDR39U1-201ENST00000399395 AFDNP55196 1824 aaKnown RBP23.74■■□□□ 1.39
SDR39U1-201ENST00000399395 STARD3NLO95772 234 aa23.73■■□□□ 1.39
SDR39U1-201ENST00000399395 CANXP27824 592 aaKnown RBP23.73■■□□□ 1.39
SDR39U1-201ENST00000399395 C16orf71Q8IYS4 520 aaPredicted RBP23.73■■□□□ 1.39
SDR39U1-201ENST00000399395 NRXN2Q9P2S2 1712 aa23.72■■□□□ 1.39
SDR39U1-201ENST00000399395 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
SDR39U1-201ENST00000399395 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
SDR39U1-201ENST00000399395 APLP1P51693 650 aa23.71■■□□□ 1.39
SDR39U1-201ENST00000399395 A0A087WZG4 1122 aa23.7■■□□□ 1.38
SDR39U1-201ENST00000399395 SERPINB2P05120 415 aa23.69■■□□□ 1.38
SDR39U1-201ENST00000399395 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
SDR39U1-201ENST00000399395 DLEC1Q9Y238 1755 aa23.69■■□□□ 1.38
SDR39U1-201ENST00000399395 HEG1Q9ULI3 1381 aa23.68■■□□□ 1.38
SDR39U1-201ENST00000399395 BCL2L12Q9HB09 334 aa23.68■■□□□ 1.38
SDR39U1-201ENST00000399395 ZNF330Q9Y3S2 320 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-201ENST00000399395 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-201ENST00000399395 SCN7AQ01118 1682 aa23.67■■□□□ 1.38
SDR39U1-201ENST00000399395 ZNF790Q6PG37 636 aa23.67■■□□□ 1.38
SDR39U1-201ENST00000399395 ZNF496Q96IT1 587 aaPredicted RBP23.67■■□□□ 1.38
SDR39U1-201ENST00000399395 TEX13AQ9BXU3 409 aaPredicted RBP23.67■■□□□ 1.38
SDR39U1-201ENST00000399395 EIF5P55010 431 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-201ENST00000399395 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
SDR39U1-201ENST00000399395 NPM2Q86SE8 214 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-201ENST00000399395 RBM46Q8TBY0 533 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-201ENST00000399395 TNRC6CQ9HCJ0 1690 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-201ENST00000399395 SBF1O95248 1867 aa23.66■■□□□ 1.38
SDR39U1-201ENST00000399395 RASSF7Q02833 373 aa23.65■■□□□ 1.38
SDR39U1-201ENST00000399395 C2CD5Q86YS7 1000 aa23.65■■□□□ 1.38
SDR39U1-201ENST00000399395 IL17REQ8NFR9 667 aa23.65■■□□□ 1.38
SDR39U1-201ENST00000399395 TTLL6Q8N841 843 aa23.64■■□□□ 1.37
SDR39U1-201ENST00000399395 FMNL2Q96PY5 1086 aa23.64■■□□□ 1.37
SDR39U1-201ENST00000399395 CARMIL3Q8ND23 1372 aa23.64■■□□□ 1.37
SDR39U1-201ENST00000399395 ZC3H4Q9UPT8 1303 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-201ENST00000399395 H0YIN7 160 aa23.63■■□□□ 1.37
SDR39U1-201ENST00000399395 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
SDR39U1-201ENST00000399395 IFFO2Q5TF58 517 aa23.63■■□□□ 1.37
SDR39U1-201ENST00000399395 NUDCQ9Y266 331 aa23.62■■□□□ 1.37
SDR39U1-201ENST00000399395 CEMIPQ8WUJ3 1361 aa23.61■■□□□ 1.37
SDR39U1-201ENST00000399395 WDR90Q96KV7 1748 aa23.61■■□□□ 1.37
SDR39U1-201ENST00000399395 LMNB1P20700 586 aa23.6■■□□□ 1.37
SDR39U1-201ENST00000399395 IL6STP40189 918 aaPredicted RBP23.6■■□□□ 1.37
SDR39U1-201ENST00000399395 FSTL1Q12841 308 aa23.6■■□□□ 1.37
SDR39U1-201ENST00000399395 TBC1D9BQ66K14 1250 aa23.6■■□□□ 1.37
SDR39U1-201ENST00000399395 BTBD11A6QL63 1104 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 NPHP1O15259 732 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 RSPH6AQ9H0K4 717 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 RRAGCQ9HB90 399 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 PDZRN3Q9UPQ7 1066 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 TBC1D2BQ9UPU7 963 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 TIAM2Q8IVF5 1701 aa23.59■■□□□ 1.37
SDR39U1-201ENST00000399395 ANKRD31Q8N7Z5 1873 aa23.58■■□□□ 1.36
SDR39U1-201ENST00000399395 PDE6BP35913 854 aa23.57■■□□□ 1.36
SDR39U1-201ENST00000399395 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
SDR39U1-201ENST00000399395 ZNF622Q969S3 477 aaKnown RBP eCLIP23.57■■□□□ 1.36
SDR39U1-201ENST00000399395 PHACTR3Q96KR7 559 aa23.57■■□□□ 1.36
SDR39U1-201ENST00000399395 A1BGP04217 495 aa23.56■■□□□ 1.36
SDR39U1-201ENST00000399395 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-201ENST00000399395 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.362e-8■■■■□ 22.5
SDR39U1-201ENST00000399395 BRIP1Q9BX63 1249 aa23.56■■□□□ 1.36
SDR39U1-201ENST00000399395 BCORQ6W2J9 1755 aa23.55■■□□□ 1.36
SDR39U1-201ENST00000399395 PRR5LQ6MZQ0 368 aa23.55■■□□□ 1.36
SDR39U1-201ENST00000399395 CNBD1Q8NA66 436 aa23.55■■□□□ 1.36
SDR39U1-201ENST00000399395 COL11A2P13942 1736 aaPredicted RBP23.55■■□□□ 1.36
SDR39U1-201ENST00000399395 DZIP3Q86Y13 1208 aaKnown RBP23.54■■□□□ 1.36
SDR39U1-201ENST00000399395 SMC1BQ8NDV3 1235 aa23.54■■□□□ 1.36
SDR39U1-201ENST00000399395 SETDB2Q96T68 719 aa23.54■■□□□ 1.36
SDR39U1-201ENST00000399395 CCDC88AQ3V6T2 1871 aa23.53■■□□□ 1.36
SDR39U1-201ENST00000399395 NFKBIEO00221 500 aa23.53■■□□□ 1.36
SDR39U1-201ENST00000399395 KCNQ3O43525 872 aa23.53■■□□□ 1.36
SDR39U1-201ENST00000399395 CAMTA2O94983 1202 aa23.53■■□□□ 1.36
SDR39U1-201ENST00000399395 ST5P78524 1137 aa23.53■■□□□ 1.36
SDR39U1-201ENST00000399395 GLTPD2A6NH11 291 aa23.52■■□□□ 1.36
SDR39U1-201ENST00000399395 CCDC24Q8N4L8 307 aa23.52■■□□□ 1.36
SDR39U1-201ENST00000399395 ZNF219Q9P2Y4 722 aaPredicted RBP23.52■■□□□ 1.36
SDR39U1-201ENST00000399395 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
SDR39U1-201ENST00000399395 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
SDR39U1-201ENST00000399395 C21orf2O43822 256 aa23.5■■□□□ 1.35
SDR39U1-201ENST00000399395 VEGFAP15692 232 aaPredicted RBP23.5■■□□□ 1.35
SDR39U1-201ENST00000399395 PRELPP51888 382 aa23.5■■□□□ 1.35
SDR39U1-201ENST00000399395 MCM10Q7L590 875 aa23.5■■□□□ 1.35
SDR39U1-201ENST00000399395 ZNF652Q9Y2D9 606 aa23.5■■□□□ 1.35
SDR39U1-201ENST00000399395 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-201ENST00000399395 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
SDR39U1-201ENST00000399395 CACNA1SQ13698 1873 aa23.48■■□□□ 1.35
SDR39U1-201ENST00000399395 PIP4K2AP48426 406 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms