RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 USHBP1Q8N6Y0 703 aa16.12■□□□□ 0.17
SMIM11A-201ENST00000399292 RAPGEF4Q8WZA2 1011 aa16.12■□□□□ 0.17
SMIM11A-201ENST00000399292 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
SMIM11A-201ENST00000399292 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
SMIM11A-201ENST00000399292 WNK3Q9BYP7 1800 aa16.11■□□□□ 0.17
SMIM11A-201ENST00000399292 KIF7Q2M1P5 1343 aa16.11■□□□□ 0.17
SMIM11A-201ENST00000399292 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
SMIM11A-201ENST00000399292 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
SMIM11A-201ENST00000399292 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
SMIM11A-201ENST00000399292 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
SMIM11A-201ENST00000399292 ZNF454Q8N9F8 522 aa16.09■□□□□ 0.17
SMIM11A-201ENST00000399292 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.17
SMIM11A-201ENST00000399292 NSD2O96028 1365 aa16.08■□□□□ 0.16
SMIM11A-201ENST00000399292 TXNRD1Q16881 649 aa16.07■□□□□ 0.16
SMIM11A-201ENST00000399292 KCNK17Q96T54 332 aa16.07■□□□□ 0.16
SMIM11A-201ENST00000399292 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
SMIM11A-201ENST00000399292 HRO43593 1189 aa16.06■□□□□ 0.16
SMIM11A-201ENST00000399292 SYTL4Q96C24 671 aaPredicted RBP16.06■□□□□ 0.16
SMIM11A-201ENST00000399292 EYA1Q99502 592 aa16.06■□□□□ 0.16
SMIM11A-201ENST00000399292 SBF2Q86WG5 1849 aa16.05■□□□□ 0.16
SMIM11A-201ENST00000399292 MEGF6O75095 1541 aa16.05■□□□□ 0.16
SMIM11A-201ENST00000399292 PRIM1P49642 420 aaKnown RBP16.05■□□□□ 0.16
SMIM11A-201ENST00000399292 FOSBP53539 338 aa16.05■□□□□ 0.16
SMIM11A-201ENST00000399292 EVI5O60447 810 aa16.04■□□□□ 0.16
SMIM11A-201ENST00000399292 BCL2L12Q9HB09 334 aa16.04■□□□□ 0.16
SMIM11A-201ENST00000399292 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
SMIM11A-201ENST00000399292 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
SMIM11A-201ENST00000399292 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
SMIM11A-201ENST00000399292 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
SMIM11A-201ENST00000399292 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
SMIM11A-201ENST00000399292 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
SMIM11A-201ENST00000399292 RREB1Q92766 1687 aa16.02■□□□□ 0.15
SMIM11A-201ENST00000399292 RGPD2P0DJD1 1756 aa16.01■□□□□ 0.15
SMIM11A-201ENST00000399292 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
SMIM11A-201ENST00000399292 MAP3K9P80192 1104 aa16■□□□□ 0.15
SMIM11A-201ENST00000399292 EMILIN3Q9NT22 766 aa16■□□□□ 0.15
SMIM11A-201ENST00000399292 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 MAP2P11137 1827 aaKnown RBP15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 LRP5O75197 1615 aa15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 CYP27B1O15528 508 aa15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 SLC15A2Q16348 729 aa15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
SMIM11A-201ENST00000399292 NCAPD2Q15021 1401 aa15.98■□□□□ 0.15
SMIM11A-201ENST00000399292 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
SMIM11A-201ENST00000399292 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
SMIM11A-201ENST00000399292 BBXQ8WY36 941 aaPredicted RBP15.98■□□□□ 0.15
SMIM11A-201ENST00000399292 ANKRD26Q9UPS8 1709 aa15.97■□□□□ 0.15
SMIM11A-201ENST00000399292 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
SMIM11A-201ENST00000399292 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
SMIM11A-201ENST00000399292 HCSTQ9UBK5 93 aa15.97■□□□□ 0.15
SMIM11A-201ENST00000399292 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
SMIM11A-201ENST00000399292 MTHFSP49914 203 aa15.96■□□□□ 0.15
SMIM11A-201ENST00000399292 IFNL2Q8IZJ0 200 aa15.96■□□□□ 0.15
SMIM11A-201ENST00000399292 VPS9D1Q9Y2B5 631 aa15.96■□□□□ 0.15
SMIM11A-201ENST00000399292 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
SMIM11A-201ENST00000399292 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
SMIM11A-201ENST00000399292 PTPREP23469 700 aa15.94■□□□□ 0.14
SMIM11A-201ENST00000399292 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
SMIM11A-201ENST00000399292 SLC4A5Q9BY07 1137 aa15.94■□□□□ 0.14
SMIM11A-201ENST00000399292 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
SMIM11A-201ENST00000399292 KAT6BQ8WYB5 2073 aa15.94■□□□□ 0.14
SMIM11A-201ENST00000399292 PHKG2P15735 406 aa15.93■□□□□ 0.14
SMIM11A-201ENST00000399292 IL13P35225 146 aa15.93■□□□□ 0.14
SMIM11A-201ENST00000399292 ZDHHC16Q969W1 377 aa15.93■□□□□ 0.14
SMIM11A-201ENST00000399292 BTAF1O14981 1849 aa15.92■□□□□ 0.14
SMIM11A-201ENST00000399292 KCNQ4P56696 695 aa15.92■□□□□ 0.14
SMIM11A-201ENST00000399292 AMOTQ4VCS5 1084 aa15.92■□□□□ 0.14
SMIM11A-201ENST00000399292 SULT6B1Q6IMI4 303 aa15.92■□□□□ 0.14
SMIM11A-201ENST00000399292 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
SMIM11A-201ENST00000399292 CCNL1Q9UK58 526 aaPredicted RBP15.92■□□□□ 0.14
SMIM11A-201ENST00000399292 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
SMIM11A-201ENST00000399292 PLEKHG2Q9H7P9 1386 aa15.91■□□□□ 0.14
SMIM11A-201ENST00000399292 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
SMIM11A-201ENST00000399292 ZBTB7AO95365 584 aa15.91■□□□□ 0.14
SMIM11A-201ENST00000399292 HMGB2P26583 209 aaKnown RBP15.91■□□□□ 0.14
SMIM11A-201ENST00000399292 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
SMIM11A-201ENST00000399292 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
SMIM11A-201ENST00000399292 PIGBQ92521 554 aa15.9■□□□□ 0.14
SMIM11A-201ENST00000399292 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
SMIM11A-201ENST00000399292 ADAM33Q9BZ11 813 aa15.9■□□□□ 0.14
SMIM11A-201ENST00000399292 DOT1LQ8TEK3 1739 aa15.89■□□□□ 0.13
SMIM11A-201ENST00000399292 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
SMIM11A-201ENST00000399292 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
SMIM11A-201ENST00000399292 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
SMIM11A-201ENST00000399292 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
SMIM11A-201ENST00000399292 CAMK2BQ13554 666 aa15.88■□□□□ 0.13
SMIM11A-201ENST00000399292 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
SMIM11A-201ENST00000399292 KCTD12Q96CX2 325 aaKnown RBP15.87■□□□□ 0.13
SMIM11A-201ENST00000399292 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
SMIM11A-201ENST00000399292 ZBED2Q9BTP6 218 aa15.87■□□□□ 0.13
SMIM11A-201ENST00000399292 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
SMIM11A-201ENST00000399292 PKD1L3Q7Z443 1732 aa15.87■□□□□ 0.13
SMIM11A-201ENST00000399292 PALLDQ8WX93 1383 aa15.87■□□□□ 0.13
SMIM11A-201ENST00000399292 ERVV-2B6SEH9 535 aa15.86■□□□□ 0.13
SMIM11A-201ENST00000399292 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
SMIM11A-201ENST00000399292 SLC16A10Q8TF71 515 aa15.86■□□□□ 0.13
SMIM11A-201ENST00000399292 KDRP35968 1356 aa15.86■□□□□ 0.13
SMIM11A-201ENST00000399292 HMOX1P09601 288 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms