RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 JAKMIP1Q96N16 626 aaKnown RBP17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 INSRP06213 1382 aa17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 KRT222Q8N1A0 295 aa17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 TMCO3Q6UWJ1 677 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 CYP46A1Q9Y6A2 500 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 PREX2Q70Z35 1606 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.354e-13■■■■■ 37.8
RPRD1A-202ENST00000399022 CABP4P57796 275 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 ZBTB7BO15156 539 aaPredicted RBP17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 KDM4AO75164 1064 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 PSMA5P28066 241 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 DNAAF4Q8WXU2 420 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
RPRD1A-202ENST00000399022 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-202ENST00000399022 VGLL3A8MV65 326 aa17.21■□□□□ 0.35
RPRD1A-202ENST00000399022 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
RPRD1A-202ENST00000399022 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.21■□□□□ 0.35
RPRD1A-202ENST00000399022 V9GYY5 206 aaPredicted RBP17.21■□□□□ 0.35
RPRD1A-202ENST00000399022 IL13P35225 146 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 ACBD3Q9H3P7 528 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 ZNF500O60304 480 aaPredicted RBP17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
RPRD1A-202ENST00000399022 TPM1P09493 284 aa17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 LRRFIP1Q32MZ4 808 aaKnown RBP17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 CASTP20810 708 aaKnown RBP17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
RPRD1A-202ENST00000399022 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 EYA1Q99502 592 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 G2E3Q7L622 706 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 PTCD1O75127 700 aaKnown RBP17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 UBE2HP62256 183 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 TRDNQ13061 729 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 PRPF40BQ6NWY9 871 aaKnown RBP17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 PDRG1Q9NUG6 133 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
RPRD1A-202ENST00000399022 H0YHG0 523 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 GLRX3O76003 335 aaKnown RBP17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 PDE1AP54750 535 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 CEP135Q66GS9 1140 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 DCTPP1Q9H773 170 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 CNPY2Q9Y2B0 182 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
RPRD1A-202ENST00000399022 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 CCP110O43303 1012 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 ME1P48163 572 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 BLOC1S2Q6QNY1 142 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 FEZ1Q99689 392 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 HIP1O00291 1037 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 STX6O43752 255 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 PLEKHM2Q8IWE5 1019 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 OGFRQ9NZT2 677 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 PAXBP1Q9Y5B6 917 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 USP19O94966 1318 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
RPRD1A-202ENST00000399022 TRPM2O94759 1503 aa17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 CHPF2Q9P2E5 772 aa17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 ZFYVE9O95405 1425 aa17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 URI1O94763 535 aaPredicted RBP17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 ZNF165P49910 485 aa17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 MYD88Q99836 296 aa17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 TFIP11Q9UBB9 837 aaKnown RBP17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 KIF2AO00139 706 aaPredicted RBP17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
RPRD1A-202ENST00000399022 RAB11FIP3O75154 756 aa17.14■□□□□ 0.34
RPRD1A-202ENST00000399022 SERPINC1P01008 464 aa17.14■□□□□ 0.34
RPRD1A-202ENST00000399022 NFXL1Q6ZNB6 911 aa17.14■□□□□ 0.34
RPRD1A-202ENST00000399022 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.34
RPRD1A-202ENST00000399022 DEF6Q9H4E7 631 aa17.14■□□□□ 0.34
RPRD1A-202ENST00000399022 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms