RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 AOX1Q06278 1338 aa31.15■■■□□ 2.58
COL13A1-203ENST00000398969 UBTFL1P0CB47 393 aaPredicted RBP31.15■■■□□ 2.58
COL13A1-203ENST00000398969 CUL4AQ13619 759 aa31.15■■■□□ 2.58
COL13A1-203ENST00000398969 KRT28Q7Z3Y7 464 aa31.14■■■□□ 2.58
COL13A1-203ENST00000398969 UNC5CLQ8IV45 518 aa31.14■■■□□ 2.58
COL13A1-203ENST00000398969 SSH3Q8TE77 659 aa31.13■■■□□ 2.57
COL13A1-203ENST00000398969 IL17RAQ96F46 866 aa31.13■■■□□ 2.57
COL13A1-203ENST00000398969 HDGFL1Q5TGJ6 251 aa31.13■■■□□ 2.57
COL13A1-203ENST00000398969 TRPM3Q9HCF6 1732 aaPredicted RBP31.13■■■□□ 2.57
COL13A1-203ENST00000398969 DCCP43146 1447 aa31.12■■■□□ 2.57
COL13A1-203ENST00000398969 MST1RQ04912 1400 aa31.12■■■□□ 2.57
COL13A1-203ENST00000398969 CHAMP1Q96JM3 812 aa31.12■■■□□ 2.57
COL13A1-203ENST00000398969 PHAXQ9H814 394 aaKnown RBP31.11■■■□□ 2.57
COL13A1-203ENST00000398969 GCP02774 474 aa31.1■■■□□ 2.57
COL13A1-203ENST00000398969 RBM27Q9P2N5 1060 aaKnown RBP31.1■■■□□ 2.57
COL13A1-203ENST00000398969 LMOD2Q6P5Q4 547 aa31.1■■■□□ 2.57
COL13A1-203ENST00000398969 IL1RAPL2Q9NP60 686 aa31.1■■■□□ 2.57
COL13A1-203ENST00000398969 BRD1O95696 1058 aa31.09■■■□□ 2.57
COL13A1-203ENST00000398969 SLIT3O75094 1523 aa31.09■■■□□ 2.57
COL13A1-203ENST00000398969 INTS4Q96HW7 963 aaKnown RBP31.09■■■□□ 2.57
COL13A1-203ENST00000398969 RBSNQ9H1K0 784 aa31.09■■■□□ 2.57
COL13A1-203ENST00000398969 PHRF1Q9P1Y6 1649 aaKnown RBP31.08■■■□□ 2.57
COL13A1-203ENST00000398969 LMTK3Q96Q04 1460 aa31.08■■■□□ 2.57
COL13A1-203ENST00000398969 FOXD4L5Q5VV16 416 aaPredicted RBP31.08■■■□□ 2.57
COL13A1-203ENST00000398969 USHBP1Q8N6Y0 703 aa31.08■■■□□ 2.57
COL13A1-203ENST00000398969 FOXD4L4Q8WXT5 416 aaPredicted RBP31.08■■■□□ 2.57
COL13A1-203ENST00000398969 PRIM1P49642 420 aaKnown RBP31.08■■■□□ 2.57
COL13A1-203ENST00000398969 RAB11FIP3O75154 756 aa31.07■■■□□ 2.56
COL13A1-203ENST00000398969 POLA2Q14181 598 aa31.07■■■□□ 2.56
COL13A1-203ENST00000398969 CEMIPQ8WUJ3 1361 aa31.06■■■□□ 2.56
COL13A1-203ENST00000398969 PPP1R42Q7Z4L9 355 aa31.06■■■□□ 2.56
COL13A1-203ENST00000398969 NUTM1Q86Y26 1132 aa31.06■■■□□ 2.56
COL13A1-203ENST00000398969 IL25Q9H293 177 aa31.06■■■□□ 2.56
COL13A1-203ENST00000398969 ZBTB7CA1YPR0 619 aa31.05■■■□□ 2.56
COL13A1-203ENST00000398969 EPB41L2O43491 1005 aaKnown RBP31.05■■■□□ 2.56
COL13A1-203ENST00000398969 ARHGEF25Q86VW2 580 aa31.05■■■□□ 2.56
COL13A1-203ENST00000398969 TMEM63CQ9P1W3 806 aa31.05■■■□□ 2.56
COL13A1-203ENST00000398969 NOL8Q76FK4 1167 aaKnown RBP31.05■■■□□ 2.56
COL13A1-203ENST00000398969 CADPS2Q86UW7 1296 aa31.05■■■□□ 2.56
COL13A1-203ENST00000398969 NSFL1CQ9UNZ2 370 aaKnown RBP31.05■■■□□ 2.56
COL13A1-203ENST00000398969 SURF6O75683 361 aaKnown RBP31.04■■■□□ 2.56
COL13A1-203ENST00000398969 ZSCAN30Q86W11 494 aa31.04■■■□□ 2.56
COL13A1-203ENST00000398969 UPF3BQ9BZI7 483 aaKnown RBP31.03■■■□□ 2.56
COL13A1-203ENST00000398969 MED1Q15648 1581 aaPredicted RBP31.03■■■□□ 2.56
COL13A1-203ENST00000398969 PLEKHG5O94827 1062 aa31.03■■■□□ 2.56
COL13A1-203ENST00000398969 NBPF6Q5VWK0 638 aa31.03■■■□□ 2.56
COL13A1-203ENST00000398969 NBPF4Q96M43 638 aa31.03■■■□□ 2.56
COL13A1-203ENST00000398969 MBD3O95983 291 aa31.02■■■□□ 2.56
COL13A1-203ENST00000398969 HSPA4P34932 840 aa31.02■■■□□ 2.56
COL13A1-203ENST00000398969 RHPN1Q8TCX5 695 aa31.02■■■□□ 2.56
COL13A1-203ENST00000398969 LRSAM1Q6UWE0 723 aa31.01■■■□□ 2.56
COL13A1-203ENST00000398969 PI4K2BQ8TCG2 481 aa31.01■■■□□ 2.56
COL13A1-203ENST00000398969 STRCQ7RTU9 1775 aa31.01■■■□□ 2.55
COL13A1-203ENST00000398969 EIF2S2P20042 333 aaKnown RBP31■■■□□ 2.55
COL13A1-203ENST00000398969 EIF4A1P60842 406 aaKnown RBP31■■■□□ 2.55
COL13A1-203ENST00000398969 ALS2Q96Q42 1657 aa30.99■■■□□ 2.55
COL13A1-203ENST00000398969 SRGAP3O43295 1099 aa30.99■■■□□ 2.55
COL13A1-203ENST00000398969 PDLIM2Q96JY6 352 aa30.99■■■□□ 2.55
COL13A1-203ENST00000398969 SYCE3A1L190 88 aa30.99■■■□□ 2.55
COL13A1-203ENST00000398969 NBPF7P0C2Y1 421 aaPredicted RBP30.99■■■□□ 2.55
COL13A1-203ENST00000398969 MAP4K4O95819 1239 aaPredicted RBP30.98■■■□□ 2.55
COL13A1-203ENST00000398969 DDX17Q92841 729 aaKnown RBP30.98■■■□□ 2.55
COL13A1-203ENST00000398969 KIF1BPQ96EK5 621 aa30.98■■■□□ 2.55
COL13A1-203ENST00000398969 HOXB7P09629 217 aa30.98■■■□□ 2.55
COL13A1-203ENST00000398969 CHPF2Q9P2E5 772 aa30.98■■■□□ 2.55
COL13A1-203ENST00000398969 KDM3BQ7LBC6 1761 aa30.97■■■□□ 2.55
COL13A1-203ENST00000398969 BEND3Q5T5X7 828 aa30.97■■■□□ 2.55
COL13A1-203ENST00000398969 LGR6Q9HBX8 967 aa30.97■■■□□ 2.55
COL13A1-203ENST00000398969 HS1BP3Q53T59 392 aa30.96■■■□□ 2.55
COL13A1-203ENST00000398969 RAD50Q92878 1312 aa30.96■■■□□ 2.55
COL13A1-203ENST00000398969 SGSM2O43147 1006 aa30.96■■■□□ 2.55
COL13A1-203ENST00000398969 DNAAF4Q8WXU2 420 aa30.96■■■□□ 2.55
COL13A1-203ENST00000398969 LRRC59Q96AG4 307 aaKnown RBP30.95■■■□□ 2.54
COL13A1-203ENST00000398969 XIRP1Q702N8 1843 aaKnown RBP30.95■■■□□ 2.54
COL13A1-203ENST00000398969 PI4KAP2A4QPH2 592 aa30.94■■■□□ 2.54
COL13A1-203ENST00000398969 PI4KAP1Q8N8J0 262 aa30.94■■■□□ 2.54
COL13A1-203ENST00000398969 RGPD2P0DJD1 1756 aa30.94■■■□□ 2.54
COL13A1-203ENST00000398969 NPHP3Q7Z494 1330 aa30.94■■■□□ 2.54
COL13A1-203ENST00000398969 PRKCSHP14314 528 aaPredicted RBP30.94■■■□□ 2.54
COL13A1-203ENST00000398969 MSNP26038 577 aaKnown RBP30.93■■■□□ 2.54
COL13A1-203ENST00000398969 KCNQ3O43525 872 aa30.92■■■□□ 2.54
COL13A1-203ENST00000398969 CNTROBQ8N137 903 aa30.92■■■□□ 2.54
COL13A1-203ENST00000398969 CHMP4AQ9BY43 222 aa30.91■■■□□ 2.54
COL13A1-203ENST00000398969 AXIN2Q9Y2T1 843 aa30.91■■■□□ 2.54
COL13A1-203ENST00000398969 LSG1Q9H089 658 aaKnown RBP30.91■■■□□ 2.54
COL13A1-203ENST00000398969 CRYBG1Q9Y4K1 1723 aa30.91■■■□□ 2.54
COL13A1-203ENST00000398969 ANKRD24Q8TF21 1146 aa30.9■■■□□ 2.54
COL13A1-203ENST00000398969 SNX14Q9Y5W7 946 aa30.9■■■□□ 2.54
COL13A1-203ENST00000398969 WDR33Q9C0J8 1336 aaKnown RBP30.9■■■□□ 2.54
COL13A1-203ENST00000398969 HSP90AB4PQ58FF6 505 aa30.9■■■□□ 2.54
COL13A1-203ENST00000398969 ADCY9O60503 1353 aa30.9■■■□□ 2.54
COL13A1-203ENST00000398969 USP42Q9H9J4 1324 aaKnown RBP30.89■■■□□ 2.54
COL13A1-203ENST00000398969 LMO7Q8WWI1 1683 aa30.89■■■□□ 2.54
COL13A1-203ENST00000398969 TTC14Q96N46 770 aa30.88■■■□□ 2.53
COL13A1-203ENST00000398969 ANXA1P04083 346 aa30.87■■■□□ 2.53
COL13A1-203ENST00000398969 ZC3H6P61129 1189 aaKnown RBP30.87■■■□□ 2.53
COL13A1-203ENST00000398969 NOL7Q9UMY1 257 aaKnown RBP30.87■■■□□ 2.53
COL13A1-203ENST00000398969 NCAPD2Q15021 1401 aa30.87■■■□□ 2.53
COL13A1-203ENST00000398969 RPAP1Q9BWH6 1393 aaPredicted RBP30.87■■■□□ 2.53
COL13A1-203ENST00000398969 TEFQ10587 303 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms