RNA–Protein interactions for RNA: ENST00000397223.4

FOXRED2-203, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-203ENST00000397223 PROSER3Q2NL68 480 aa21.62■■□□□ 1.05
FOXRED2-203ENST00000397223 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
FOXRED2-203ENST00000397223 RGS12O14924 1447 aa21.61■■□□□ 1.05
FOXRED2-203ENST00000397223 FTSJ3Q8IY81 847 aaKnown RBP21.61■■□□□ 1.05
FOXRED2-203ENST00000397223 USP16Q9Y5T5 823 aa21.61■■□□□ 1.05
FOXRED2-203ENST00000397223 PRIM1P49642 420 aaKnown RBP21.61■■□□□ 1.05
FOXRED2-203ENST00000397223 CDCA7Q9BWT1 371 aaPredicted RBP21.61■■□□□ 1.05
FOXRED2-203ENST00000397223 TMOD3Q9NYL9 352 aa21.61■■□□□ 1.05
FOXRED2-203ENST00000397223 F6X3S4 739 aa21.6■■□□□ 1.05
FOXRED2-203ENST00000397223 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
FOXRED2-203ENST00000397223 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
FOXRED2-203ENST00000397223 CCDC30Q5VVM6 783 aa21.6■■□□□ 1.05
FOXRED2-203ENST00000397223 QTRT2Q9H974 415 aaKnown RBP21.6■■□□□ 1.05
FOXRED2-203ENST00000397223 ATRNO75882 1429 aa21.59■■□□□ 1.05
FOXRED2-203ENST00000397223 KCNQ2O43526 872 aa21.59■■□□□ 1.05
FOXRED2-203ENST00000397223 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
FOXRED2-203ENST00000397223 KCPQ6ZWJ8 1503 aa21.59■■□□□ 1.05
FOXRED2-203ENST00000397223 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
FOXRED2-203ENST00000397223 THSD7AQ9UPZ6 1657 aa21.58■■□□□ 1.05
FOXRED2-203ENST00000397223 ITPRIPQ8IWB1 547 aa21.58■■□□□ 1.04
FOXRED2-203ENST00000397223 MVPQ14764 893 aaKnown RBP21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 STK31Q9BXU1 1019 aa21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 BCL9O00512 1426 aa21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 BRPF3Q9ULD4 1205 aa21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 KDM2BQ8NHM5 1336 aa21.57■■□□□ 1.04
FOXRED2-203ENST00000397223 IPO8O15397 1037 aaKnown RBP21.56■■□□□ 1.04
FOXRED2-203ENST00000397223 FLIIQ13045 1269 aa21.56■■□□□ 1.04
FOXRED2-203ENST00000397223 TRPC5Q9UL62 973 aaPredicted RBP21.56■■□□□ 1.04
FOXRED2-203ENST00000397223 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
FOXRED2-203ENST00000397223 PDIA6Q15084 440 aa21.55■■□□□ 1.04
FOXRED2-203ENST00000397223 ABCC4O15439 1325 aa21.55■■□□□ 1.04
FOXRED2-203ENST00000397223 ARHGAP45Q92619 1136 aa21.54■■□□□ 1.04
FOXRED2-203ENST00000397223 SLC4A9Q96Q91 983 aa21.54■■□□□ 1.04
FOXRED2-203ENST00000397223 HOXB7P09629 217 aa21.54■■□□□ 1.04
FOXRED2-203ENST00000397223 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
FOXRED2-203ENST00000397223 CACNA1FO60840 1977 aa21.54■■□□□ 1.04
FOXRED2-203ENST00000397223 FKBP5Q13451 457 aaPredicted RBP21.53■■□□□ 1.04
FOXRED2-203ENST00000397223 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
FOXRED2-203ENST00000397223 SNRPA1P09661 255 aaKnown RBP21.53■■□□□ 1.04
FOXRED2-203ENST00000397223 MYL6BP14649 208 aa21.53■■□□□ 1.04
FOXRED2-203ENST00000397223 SLC4A10Q6U841 1118 aa21.52■■□□□ 1.04
FOXRED2-203ENST00000397223 SEPT12Q8IYM1 358 aa21.52■■□□□ 1.04
FOXRED2-203ENST00000397223 RBM42Q9BTD8 480 aaKnown RBP21.52■■□□□ 1.04
FOXRED2-203ENST00000397223 FBXO41Q8TF61 875 aa21.51■■□□□ 1.03
FOXRED2-203ENST00000397223 SOS1Q07889 1333 aaPredicted RBP21.51■■□□□ 1.03
FOXRED2-203ENST00000397223 PCDHB15Q9Y5E8 787 aa21.51■■□□□ 1.03
FOXRED2-203ENST00000397223 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
FOXRED2-203ENST00000397223 PTPRCP08575 1304 aa21.5■■□□□ 1.03
FOXRED2-203ENST00000397223 A1BGP04217 495 aa21.5■■□□□ 1.03
FOXRED2-203ENST00000397223 API5Q9BZZ5 524 aaKnown RBP21.5■■□□□ 1.03
FOXRED2-203ENST00000397223 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
FOXRED2-203ENST00000397223 ONECUT3O60422 494 aaPredicted RBP21.49■■□□□ 1.03
FOXRED2-203ENST00000397223 AIMP1Q12904 312 aaKnown RBP21.49■■□□□ 1.03
FOXRED2-203ENST00000397223 C1orf115Q9H7X2 142 aa21.49■■□□□ 1.03
FOXRED2-203ENST00000397223 BRWD3Q6RI45 1802 aa21.49■■□□□ 1.03
FOXRED2-203ENST00000397223 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 NBPF26B4DH59 902 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 NBPF14Q5TI25 921 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 NBPF10Q6P3W6 841 aaKnown RBP21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 LRP10Q7Z4F1 713 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 NBPF15Q8N660 670 aa21.48■■□□□ 1.03
FOXRED2-203ENST00000397223 ZBTB7BO15156 539 aaPredicted RBP21.47■■□□□ 1.03
FOXRED2-203ENST00000397223 IGHDP01880 384 aa21.47■■□□□ 1.03
FOXRED2-203ENST00000397223 RGS17Q9UGC6 210 aaPredicted RBP21.47■■□□□ 1.03
FOXRED2-203ENST00000397223 PI4KAP2A4QPH2 592 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 KCNQ4P56696 695 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 PI4KAP1Q8N8J0 262 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 DDX19BQ9UMR2 479 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 ADCY9O60503 1353 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 C8orf34Q49A92 452 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 ZBTB40Q9NUA8 1239 aa21.46■■□□□ 1.03
FOXRED2-203ENST00000397223 INTS3Q68E01 1043 aaKnown RBP21.45■■□□□ 1.02
FOXRED2-203ENST00000397223 FAM43AQ8N2R8 423 aa21.44■■□□□ 1.02
FOXRED2-203ENST00000397223 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
FOXRED2-203ENST00000397223 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
FOXRED2-203ENST00000397223 MEIS3Q99687 375 aa21.43■■□□□ 1.02
FOXRED2-203ENST00000397223 SBF2Q86WG5 1849 aa21.42■■□□□ 1.02
FOXRED2-203ENST00000397223 TJP1Q07157 1748 aa21.42■■□□□ 1.02
FOXRED2-203ENST00000397223 SLC4A3P48751 1232 aa21.42■■□□□ 1.02
FOXRED2-203ENST00000397223 HYPKQ9NX55 129 aa21.41■■□□□ 1.02
FOXRED2-203ENST00000397223 MAP3K2Q9Y2U5 619 aa21.41■■□□□ 1.02
FOXRED2-203ENST00000397223 BTAF1O14981 1849 aa21.4■■□□□ 1.02
FOXRED2-203ENST00000397223 TTLL7Q6ZT98 887 aa21.4■■□□□ 1.02
FOXRED2-203ENST00000397223 ZNF330Q9Y3S2 320 aaPredicted RBP21.4■■□□□ 1.02
FOXRED2-203ENST00000397223 ITPK1Q13572 414 aa21.39■■□□□ 1.01
FOXRED2-203ENST00000397223 POTEAQ6S8J7 498 aa21.39■■□□□ 1.01
FOXRED2-203ENST00000397223 DNAAF4Q8WXU2 420 aa21.39■■□□□ 1.01
FOXRED2-203ENST00000397223 PALLDQ8WX93 1383 aa21.39■■□□□ 1.01
FOXRED2-203ENST00000397223 ZNF772Q68DY9 489 aaPredicted RBP21.38■■□□□ 1.01
FOXRED2-203ENST00000397223 CWF19L2Q2TBE0 894 aaKnown RBP21.38■■□□□ 1.01
FOXRED2-203ENST00000397223 LOC102724428A0A0B4J2F2 783 aa21.37■■□□□ 1.01
FOXRED2-203ENST00000397223 CYP19A1P11511 503 aaPredicted RBP21.37■■□□□ 1.01
FOXRED2-203ENST00000397223 SIK1P57059 783 aa21.37■■□□□ 1.01
FOXRED2-203ENST00000397223 NHSQ6T4R5 1651 aa21.37■■□□□ 1.01
FOXRED2-203ENST00000397223 ATP6V1AP38606 617 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms