RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
NUP98-206ENST00000397013 SPG7Q9UQ90 795 aa11.16□□□□□ -0.62
NUP98-206ENST00000397013 C4BP0C0L5 1744 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 WASHC2AQ641Q2 1341 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 DPEP1P16444 411 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 HTRA3P83110 453 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
NUP98-206ENST00000397013 NMRK2Q9NPI5 230 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 BCS1LQ9Y276 419 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 NSD3Q9BZ95 1437 aa11.15□□□□□ -0.62
NUP98-206ENST00000397013 C5P01031 1676 aa11.14□□□□□ -0.63
NUP98-206ENST00000397013 EIF4A2Q14240 407 aaKnown RBP11.14□□□□□ -0.63
NUP98-206ENST00000397013 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
NUP98-206ENST00000397013 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
NUP98-206ENST00000397013 PPP1R37O75864 691 aa11.13□□□□□ -0.63
NUP98-206ENST00000397013 KCNA3P22001 575 aa11.13□□□□□ -0.63
NUP98-206ENST00000397013 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
NUP98-206ENST00000397013 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
NUP98-206ENST00000397013 NCAPD2Q15021 1401 aa11.12□□□□□ -0.63
NUP98-206ENST00000397013 GYS1P13807 737 aa11.12□□□□□ -0.63
NUP98-206ENST00000397013 MS4A4AQ96JQ5 239 aa11.12□□□□□ -0.63
NUP98-206ENST00000397013 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
NUP98-206ENST00000397013 FCHSD2O94868 740 aa11.11□□□□□ -0.63
NUP98-206ENST00000397013 TGFB2P61812 414 aa11.11□□□□□ -0.63
NUP98-206ENST00000397013 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
NUP98-206ENST00000397013 WDR70Q9NW82 654 aa11.11□□□□□ -0.63
NUP98-206ENST00000397013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.11□□□□□ -0.637e-9■■■□□ 16.7
NUP98-206ENST00000397013 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
NUP98-206ENST00000397013 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
NUP98-206ENST00000397013 KIF24Q5T7B8 1368 aa11.11□□□□□ -0.63
NUP98-206ENST00000397013 TAF1LQ8IZX4 1826 aa11.1□□□□□ -0.63
NUP98-206ENST00000397013 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
NUP98-206ENST00000397013 IER5LQ5T953 404 aa11.1□□□□□ -0.63
NUP98-206ENST00000397013 C9orf131Q5VYM1 1079 aa11.1□□□□□ -0.63
NUP98-206ENST00000397013 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
NUP98-206ENST00000397013 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
NUP98-206ENST00000397013 MAP2P11137 1827 aaKnown RBP11.09□□□□□ -0.63
NUP98-206ENST00000397013 UBR3Q6ZT12 1888 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 KDRP35968 1356 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 TOMM70O94826 608 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 CHRNA5P30532 468 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 RFC4P35249 363 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 DDR1Q08345 913 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
NUP98-206ENST00000397013 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
NUP98-206ENST00000397013 ITGB4P16144 1822 aa11.08□□□□□ -0.64
NUP98-206ENST00000397013 ERVV-2B6SEH9 535 aa11.08□□□□□ -0.64
NUP98-206ENST00000397013 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
NUP98-206ENST00000397013 HMGB2P26583 209 aaKnown RBP11.08□□□□□ -0.64
NUP98-206ENST00000397013 APLP1P51693 650 aa11.08□□□□□ -0.64
NUP98-206ENST00000397013 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
NUP98-206ENST00000397013 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
NUP98-206ENST00000397013 PARP3Q9Y6F1 533 aa11.08□□□□□ -0.64
NUP98-206ENST00000397013 CICQ96RK0 1608 aaPredicted RBP11.07□□□□□ -0.64
NUP98-206ENST00000397013 GABBR2O75899 941 aa11.07□□□□□ -0.64
NUP98-206ENST00000397013 CABP4P57796 275 aa11.07□□□□□ -0.64
NUP98-206ENST00000397013 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
NUP98-206ENST00000397013 RRAGCQ9HB90 399 aa11.07□□□□□ -0.64
NUP98-206ENST00000397013 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
NUP98-206ENST00000397013 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
NUP98-206ENST00000397013 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
NUP98-206ENST00000397013 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
NUP98-206ENST00000397013 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
NUP98-206ENST00000397013 DCAF5Q96JK2 942 aa11.06□□□□□ -0.64
NUP98-206ENST00000397013 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
NUP98-206ENST00000397013 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
NUP98-206ENST00000397013 CNTNAP4Q9C0A0 1308 aa11.06□□□□□ -0.64
NUP98-206ENST00000397013 MTHFSP49914 203 aa11.05□□□□□ -0.64
NUP98-206ENST00000397013 PRELPP51888 382 aa11.05□□□□□ -0.64
NUP98-206ENST00000397013 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
NUP98-206ENST00000397013 NBR1Q14596 966 aa11.05□□□□□ -0.64
NUP98-206ENST00000397013 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
NUP98-206ENST00000397013 PANK3Q9H999 370 aa11.05□□□□□ -0.64
NUP98-206ENST00000397013 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
NUP98-206ENST00000397013 PCNTO95613 3336 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 N4BP2Q86UW6 1770 aaPredicted RBP11.04□□□□□ -0.64
NUP98-206ENST00000397013 PDE4AP27815 886 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 TM4SF1P30408 202 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 DALRD3Q5D0E6 543 aaKnown RBP11.04□□□□□ -0.64
NUP98-206ENST00000397013 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 LGR6Q9HBX8 967 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 RNF181Q9P0P0 153 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 KIAA1551Q9HCM1 1747 aa11.04□□□□□ -0.64
NUP98-206ENST00000397013 KIF20BQ96Q89 1820 aa11.03□□□□□ -0.64
NUP98-206ENST00000397013 POLRMTO00411 1230 aaKnown RBP11.03□□□□□ -0.64
NUP98-206ENST00000397013 RASSF7Q02833 373 aa11.03□□□□□ -0.64
NUP98-206ENST00000397013 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
NUP98-206ENST00000397013 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
NUP98-206ENST00000397013 SULT6B1Q6IMI4 303 aa11.03□□□□□ -0.64
NUP98-206ENST00000397013 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
NUP98-206ENST00000397013 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
NUP98-206ENST00000397013 USP42Q9H9J4 1324 aaKnown RBP11.03□□□□□ -0.64
NUP98-206ENST00000397013 KLRG1Q96E93 195 aa11.02□□□□□ -0.65
NUP98-206ENST00000397013 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
NUP98-206ENST00000397013 AMOTQ4VCS5 1084 aa11.01□□□□□ -0.65
NUP98-206ENST00000397013 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms