RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 SLC27A3Q5K4L6 730 aa22.35■■□□□ 1.17
HLA-A-204ENST00000396634 CICQ96RK0 1608 aaPredicted RBP22.35■■□□□ 1.17
HLA-A-204ENST00000396634 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
HLA-A-204ENST00000396634 BABAM1Q9NWV8 329 aa22.34■■□□□ 1.17
HLA-A-204ENST00000396634 SNRPA1P09661 255 aaKnown RBP22.33■■□□□ 1.17
HLA-A-204ENST00000396634 EIF2S2P20042 333 aaKnown RBP22.33■■□□□ 1.17
HLA-A-204ENST00000396634 CRKLP46109 303 aaKnown RBP22.32■■□□□ 1.16
HLA-A-204ENST00000396634 DUSP27Q5VZP5 1158 aa22.32■■□□□ 1.16
HLA-A-204ENST00000396634 BCL11AQ9H165 835 aa22.32■■□□□ 1.16
HLA-A-204ENST00000396634 E9PSI1 815 aa22.32■■□□□ 1.16
HLA-A-204ENST00000396634 A1BGP04217 495 aa22.32■■□□□ 1.16
HLA-A-204ENST00000396634 CYP19A1P11511 503 aaPredicted RBP22.32■■□□□ 1.16
HLA-A-204ENST00000396634 MYH16Q9H6N6 1097 aa22.32■■□□□ 1.16
HLA-A-204ENST00000396634 TCERG1O14776 1098 aaKnown RBP22.31■■□□□ 1.16
HLA-A-204ENST00000396634 UBR3Q6ZT12 1888 aa22.31■■□□□ 1.16
HLA-A-204ENST00000396634 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
HLA-A-204ENST00000396634 ZBTB1Q9Y2K1 713 aa22.3■■□□□ 1.16
HLA-A-204ENST00000396634 ANXA1P04083 346 aa22.3■■□□□ 1.16
HLA-A-204ENST00000396634 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
HLA-A-204ENST00000396634 GNPATO15228 680 aa22.29■■□□□ 1.16
HLA-A-204ENST00000396634 PHF14O94880 888 aa22.29■■□□□ 1.16
HLA-A-204ENST00000396634 ZNF330Q9Y3S2 320 aaPredicted RBP22.29■■□□□ 1.16
HLA-A-204ENST00000396634 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
HLA-A-204ENST00000396634 INTS5Q6P9B9 1019 aaKnown RBP22.28■■□□□ 1.16
HLA-A-204ENST00000396634 PSDA5PKW4 1024 aaPredicted RBP22.28■■□□□ 1.16
HLA-A-204ENST00000396634 AKT1S1Q96B36 256 aa22.28■■□□□ 1.16
HLA-A-204ENST00000396634 AK7Q96M32 723 aa22.28■■□□□ 1.16
HLA-A-204ENST00000396634 PDGFDQ9GZP0 370 aaPredicted RBP22.28■■□□□ 1.16
HLA-A-204ENST00000396634 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
HLA-A-204ENST00000396634 TRMT2AQ8IZ69 625 aaKnown RBP22.27■■□□□ 1.16
HLA-A-204ENST00000396634 SRCAPQ6ZRS2 3230 aa22.27■■□□□ 1.15
HLA-A-204ENST00000396634 STARD3NLO95772 234 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 PROSER3Q2NL68 480 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 CCDC87Q9NVE4 849 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 NBPF26B4DH59 902 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 R3HDM1Q15032 1099 aaKnown RBP22.26■■□□□ 1.15
HLA-A-204ENST00000396634 HDGFL1Q5TGJ6 251 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 NBPF10Q6P3W6 841 aaKnown RBP22.26■■□□□ 1.15
HLA-A-204ENST00000396634 NBPF15Q8N660 670 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 TFCP2L1Q9NZI6 479 aa22.26■■□□□ 1.15
HLA-A-204ENST00000396634 MYL6BP14649 208 aa22.25■■□□□ 1.15
HLA-A-204ENST00000396634 SLC15A2Q16348 729 aa22.25■■□□□ 1.15
HLA-A-204ENST00000396634 CNTNAP4Q9C0A0 1308 aa22.25■■□□□ 1.15
HLA-A-204ENST00000396634 C4AP0C0L4 1744 aa22.25■■□□□ 1.15
HLA-A-204ENST00000396634 STK32BQ9NY57 414 aa22.24■■□□□ 1.15
HLA-A-204ENST00000396634 CHPF2Q9P2E5 772 aa22.24■■□□□ 1.15
HLA-A-204ENST00000396634 TEX13AQ9BXU3 409 aaPredicted RBP22.23■■□□□ 1.15
HLA-A-204ENST00000396634 VAMP4O75379 141 aa22.22■■□□□ 1.15
HLA-A-204ENST00000396634 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
HLA-A-204ENST00000396634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.21■■□□□ 1.15
HLA-A-204ENST00000396634 PDIA6Q15084 440 aa22.21■■□□□ 1.15
HLA-A-204ENST00000396634 TSHZ2Q9NRE2 1034 aa22.21■■□□□ 1.15
HLA-A-204ENST00000396634 ARXQ96QS3 562 aa22.2■■□□□ 1.14
HLA-A-204ENST00000396634 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
HLA-A-204ENST00000396634 MSH5O43196 834 aa22.2■■□□□ 1.14
HLA-A-204ENST00000396634 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
HLA-A-204ENST00000396634 RC3H1Q5TC82 1133 aaKnown RBP22.2■■□□□ 1.14
HLA-A-204ENST00000396634 RTCBQ9Y3I0 505 aaKnown RBP22.2■■□□□ 1.14
HLA-A-204ENST00000396634 COL15A1P39059 1388 aa22.19■■□□□ 1.14
HLA-A-204ENST00000396634 RPS6KA4O75676 772 aa22.19■■□□□ 1.14
HLA-A-204ENST00000396634 HOXB7P09629 217 aa22.19■■□□□ 1.14
HLA-A-204ENST00000396634 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
HLA-A-204ENST00000396634 QSER1Q2KHR3 1735 aa22.18■■□□□ 1.14
HLA-A-204ENST00000396634 SRP68Q9UHB9 627 aaKnown RBP22.17■■□□□ 1.14
HLA-A-204ENST00000396634 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
HLA-A-204ENST00000396634 TBC1D2BQ9UPU7 963 aa22.17■■□□□ 1.14
HLA-A-204ENST00000396634 EIF5P55010 431 aaKnown RBP22.16■■□□□ 1.14
HLA-A-204ENST00000396634 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
HLA-A-204ENST00000396634 LRP10Q7Z4F1 713 aa22.16■■□□□ 1.14
HLA-A-204ENST00000396634 PHAXQ9H814 394 aaKnown RBP22.16■■□□□ 1.14
HLA-A-204ENST00000396634 CASZ1Q86V15 1759 aa22.16■■□□□ 1.14
HLA-A-204ENST00000396634 TTLL7Q6ZT98 887 aa22.15■■□□□ 1.14
HLA-A-204ENST00000396634 CCDC30Q5VVM6 783 aa22.15■■□□□ 1.14
HLA-A-204ENST00000396634 G2E3Q7L622 706 aa22.15■■□□□ 1.14
HLA-A-204ENST00000396634 SSFA2P28290 1259 aa22.14■■□□□ 1.13
HLA-A-204ENST00000396634 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
HLA-A-204ENST00000396634 MSL1Q68DK7 614 aa22.14■■□□□ 1.13
HLA-A-204ENST00000396634 DDX21Q9NR30 783 aaKnown RBP eCLIP22.14■■□□□ 1.13
HLA-A-204ENST00000396634 TRAPPC3LQ5T215 181 aa22.13■■□□□ 1.13
HLA-A-204ENST00000396634 DBF4Q9UBU7 674 aaPredicted RBP22.13■■□□□ 1.13
HLA-A-204ENST00000396634 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
HLA-A-204ENST00000396634 XAGE3Q8WTP9 111 aa22.13■■□□□ 1.13
HLA-A-204ENST00000396634 SSH1Q8WYL5 1049 aa22.13■■□□□ 1.13
HLA-A-204ENST00000396634 BCORQ6W2J9 1755 aa22.12■■□□□ 1.13
HLA-A-204ENST00000396634 ZBTB7AO95365 584 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 RFC4P35249 363 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 COPS6Q7L5N1 327 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 DZIP3Q86Y13 1208 aaKnown RBP22.11■■□□□ 1.13
HLA-A-204ENST00000396634 STK31Q9BXU1 1019 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 SCN7AQ01118 1682 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 ZNF428Q96B54 188 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 ZBTB3Q9H5J0 574 aa22.11■■□□□ 1.13
HLA-A-204ENST00000396634 ERBB4Q15303 1308 aa22.1■■□□□ 1.13
HLA-A-204ENST00000396634 USPL1Q5W0Q7 1092 aa22.1■■□□□ 1.13
HLA-A-204ENST00000396634 CACNA1FO60840 1977 aa22.09■■□□□ 1.13
HLA-A-204ENST00000396634 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
HLA-A-204ENST00000396634 SMC4Q9NTJ3 1288 aa22.09■■□□□ 1.13
HLA-A-204ENST00000396634 NUP98P52948 1817 aa22.09■■□□□ 1.13
HLA-A-204ENST00000396634 USP42Q9H9J4 1324 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms