RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 SIK1P57059 783 aa12.65□□□□□ -0.38
DDX39B-202ENST00000396172 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
DDX39B-202ENST00000396172 ANKRD36CQ5JPF3 1778 aa12.65□□□□□ -0.38
DDX39B-202ENST00000396172 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
DDX39B-202ENST00000396172 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.38
DDX39B-202ENST00000396172 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.38
DDX39B-202ENST00000396172 BCORQ6W2J9 1755 aa12.65□□□□□ -0.39
DDX39B-202ENST00000396172 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-202ENST00000396172 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-202ENST00000396172 PLSCR1O15162 318 aa12.64□□□□□ -0.39
DDX39B-202ENST00000396172 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
DDX39B-202ENST00000396172 SLC27A3Q5K4L6 730 aa12.64□□□□□ -0.39
DDX39B-202ENST00000396172 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
DDX39B-202ENST00000396172 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
DDX39B-202ENST00000396172 CCDC125Q86Z20 511 aa12.63□□□□□ -0.39
DDX39B-202ENST00000396172 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
DDX39B-202ENST00000396172 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
DDX39B-202ENST00000396172 NUP98P52948 1817 aa12.63□□□□□ -0.39
DDX39B-202ENST00000396172 C4AP0C0L4 1744 aa12.63□□□□□ -0.39
DDX39B-202ENST00000396172 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
DDX39B-202ENST00000396172 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
DDX39B-202ENST00000396172 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
DDX39B-202ENST00000396172 APBA3O96018 575 aa12.62□□□□□ -0.39
DDX39B-202ENST00000396172 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
DDX39B-202ENST00000396172 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDX39B-202ENST00000396172 PTPRCP08575 1304 aa12.62□□□□□ -0.39
DDX39B-202ENST00000396172 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 MS4A1P11836 297 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 PTF1AQ7RTS3 328 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 CNTNAP4Q9C0A0 1308 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 BAG6P46379 1132 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
DDX39B-202ENST00000396172 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
DDX39B-202ENST00000396172 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
DDX39B-202ENST00000396172 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
DDX39B-202ENST00000396172 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
DDX39B-202ENST00000396172 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
DDX39B-202ENST00000396172 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
DDX39B-202ENST00000396172 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
DDX39B-202ENST00000396172 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
DDX39B-202ENST00000396172 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
DDX39B-202ENST00000396172 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
DDX39B-202ENST00000396172 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
DDX39B-202ENST00000396172 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
DDX39B-202ENST00000396172 BCAR3O75815 825 aa12.59□□□□□ -0.39
DDX39B-202ENST00000396172 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
DDX39B-202ENST00000396172 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
DDX39B-202ENST00000396172 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
DDX39B-202ENST00000396172 ITPK1Q13572 414 aa12.58□□□□□ -0.4
DDX39B-202ENST00000396172 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
DDX39B-202ENST00000396172 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-202ENST00000396172 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
DDX39B-202ENST00000396172 FLIIQ13045 1269 aa12.58□□□□□ -0.4
DDX39B-202ENST00000396172 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
DDX39B-202ENST00000396172 FRAT1Q92837 279 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-202ENST00000396172 NEFLP07196 543 aa12.57□□□□□ -0.4
DDX39B-202ENST00000396172 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
DDX39B-202ENST00000396172 MYL6BP14649 208 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 ATF7IPQ6VMQ6 1270 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 FKBP5Q13451 457 aaPredicted RBP12.56□□□□□ -0.4
DDX39B-202ENST00000396172 FKBP8Q14318 412 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 PDIA6Q15084 440 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
DDX39B-202ENST00000396172 AK7Q96M32 723 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
DDX39B-202ENST00000396172 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 COL15A1P39059 1388 aa12.56□□□□□ -0.4
DDX39B-202ENST00000396172 A0A087WZG4 1122 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 A1BGP04217 495 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 PDE3AQ14432 1141 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 KIF6Q6ZMV9 814 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 ANP32EQ9BTT0 268 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
DDX39B-202ENST00000396172 NBPF15Q8N660 670 aa12.55□□□□□ -0.4
DDX39B-202ENST00000396172 MYH3P11055 1940 aa12.54□□□□□ -0.4
DDX39B-202ENST00000396172 ADRA2BP18089 450 aa12.54□□□□□ -0.4
DDX39B-202ENST00000396172 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
DDX39B-202ENST00000396172 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
DDX39B-202ENST00000396172 ABCC4O15439 1325 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 ANXA1P04083 346 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 TRIM27P14373 513 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
DDX39B-202ENST00000396172 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
DDX39B-202ENST00000396172 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
DDX39B-202ENST00000396172 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
DDX39B-202ENST00000396172 RGL2O15211 777 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 GNPATO15228 680 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
DDX39B-202ENST00000396172 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
DDX39B-202ENST00000396172 G2E3Q7L622 706 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms