RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 ZC3H4Q9UPT8 1303 aaKnown RBP4.84□□□□□ -1.64
XRCC4-203ENST00000396027 BNIP3LO60238 219 aa4.83□□□□□ -1.64
XRCC4-203ENST00000396027 NRG1Q02297 640 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-203ENST00000396027 CNGB1Q14028 1251 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-203ENST00000396027 C14orf37Q86TY3 774 aa4.83□□□□□ -1.64
XRCC4-203ENST00000396027 TSC1Q92574 1164 aa4.83□□□□□ -1.64
XRCC4-203ENST00000396027 CCDC136Q96JN2 1154 aa4.83□□□□□ -1.64
XRCC4-203ENST00000396027 PCDHB15Q9Y5E8 787 aa4.83□□□□□ -1.64
XRCC4-203ENST00000396027 RAB15P59190 212 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 MBTPS1Q14703 1052 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 AMHR2Q16671 573 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 FAM43AQ8N2R8 423 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 ZC3H15Q8WU90 426 aaKnown RBP4.82□□□□□ -1.64
XRCC4-203ENST00000396027 PPM1GO15355 546 aaPredicted RBP4.82□□□□□ -1.64
XRCC4-203ENST00000396027 CLN3Q13286 438 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 FIGNL1Q6PIW4 674 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 FCHSD1Q86WN1 690 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 SEPT12Q8IYM1 358 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 HELBQ8NG08 1087 aaPredicted RBP4.82□□□□□ -1.64
XRCC4-203ENST00000396027 CYLDQ9NQC7 956 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 GPSM3Q9Y4H4 160 aa4.82□□□□□ -1.64
XRCC4-203ENST00000396027 LAS1LQ9Y4W2 734 aaKnown RBP4.82□□□□□ -1.64
XRCC4-203ENST00000396027 OAS3Q9Y6K5 1087 aaKnown RBP4.82□□□□□ -1.64
XRCC4-203ENST00000396027 NEFMP07197 916 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 ALAS2P22557 587 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 PTK2Q05397 1052 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 HSP90AA2PQ14568 343 aaPredicted RBP4.81□□□□□ -1.64
XRCC4-203ENST00000396027 FAM182BQ5T319 152 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 PPP2R2DQ66LE6 453 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 MAP7D2Q96T17 732 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 POLR3GLQ9BT43 218 aa4.81□□□□□ -1.64
XRCC4-203ENST00000396027 ESPNB1AK53 854 aa4.8□□□□□ -1.64
XRCC4-203ENST00000396027 GP2P55259 537 aaKnown RBP4.8□□□□□ -1.64
XRCC4-203ENST00000396027 RBM10P98175 930 aaKnown RBP4.8□□□□□ -1.64
XRCC4-203ENST00000396027 TTLL12Q14166 644 aaPredicted RBP4.8□□□□□ -1.64
XRCC4-203ENST00000396027 GRIK4Q16099 956 aa4.8□□□□□ -1.64
XRCC4-203ENST00000396027 TAF3Q5VWG9 929 aa4.8□□□□□ -1.64
XRCC4-203ENST00000396027 MTERF4Q7Z6M4 381 aaKnown RBP4.8□□□□□ -1.64
XRCC4-203ENST00000396027 PRDM6Q9NQX0 595 aa4.8□□□□□ -1.64
XRCC4-203ENST00000396027 FKBPLQ9UIM3 349 aa4.8□□□□□ -1.64
XRCC4-203ENST00000396027 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
XRCC4-203ENST00000396027 CALD1Q05682 793 aaKnown RBP4.79□□□□□ -1.64
XRCC4-203ENST00000396027 CCDC125Q86Z20 511 aa4.79□□□□□ -1.64
XRCC4-203ENST00000396027 TBC1D2Q9BYX2 928 aa4.79□□□□□ -1.64
XRCC4-203ENST00000396027 KLF15Q9UIH9 416 aa4.79□□□□□ -1.64
XRCC4-203ENST00000396027 WASHC2CQ9Y4E1 1318 aa4.79□□□□□ -1.64
XRCC4-203ENST00000396027 PTMAP06454 111 aaKnown RBP4.78□□□□□ -1.64
XRCC4-203ENST00000396027 SSTR4P31391 388 aa4.78□□□□□ -1.64
XRCC4-203ENST00000396027 CD97P48960 835 aa4.78□□□□□ -1.64
XRCC4-203ENST00000396027 CABLES1Q8TDN4 633 aa4.78□□□□□ -1.64
XRCC4-203ENST00000396027 IPO4Q8TEX9 1081 aaKnown RBP4.78□□□□□ -1.64
XRCC4-203ENST00000396027 SSBP4Q9BWG4 385 aaPredicted RBP4.78□□□□□ -1.64
XRCC4-203ENST00000396027 RUBCNLQ9H714 662 aa4.78□□□□□ -1.64
XRCC4-203ENST00000396027 NOP58Q9Y2X3 529 aaKnown RBP4.78□□□□□ -1.64
XRCC4-203ENST00000396027 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 ELOA3DA6NLF2 546 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 TNNT2P45379 298 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 ELOA3BQ3SY89 546 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 FBLN7Q53RD9 439 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 TEX2Q8IWB9 1127 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 ELOA3Q8NG57 546 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 LENG1Q96BZ8 264 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 TRIM44Q96DX7 344 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 PDCL3Q9H2J4 239 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 PCDHGC4Q9Y5F7 938 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 HSP90AA1P07900 732 aaKnown RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 ZNF468Q5VIY5 522 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-203ENST00000396027 CYP2U1Q7Z449 544 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 PARP9Q8IXQ6 854 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 ADAM32Q8TC27 787 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 AK7Q96M32 723 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 CRISPLD1Q9H336 500 aa4.77□□□□□ -1.65
XRCC4-203ENST00000396027 NUTM2BA6NNL0 878 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 NUTM2EB1AL46 878 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 TRIM66O15016 1216 aa4.76□□□□□ -1.65
XRCC4-203ENST00000396027 CLSTN1O94985 981 aa4.76□□□□□ -1.65
XRCC4-203ENST00000396027 C8AP07357 584 aa4.76□□□□□ -1.65
XRCC4-203ENST00000396027 CANXP27824 592 aaKnown RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 MSX1P28360 303 aa4.76□□□□□ -1.65
XRCC4-203ENST00000396027 GTF2E1P29083 439 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 AXDND1Q5T1B0 1012 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 NUTM2DQ5VT03 806 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 DZIP3Q86Y13 1208 aaKnown RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 NUTM2AQ8IVF1 878 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-203ENST00000396027 WASHC2AQ641Q2 1341 aa4.75□□□□□ -1.65
XRCC4-203ENST00000396027 KIAA1324LA8MWY0 1029 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-203ENST00000396027 CLGNO14967 610 aa4.75□□□□□ -1.65
XRCC4-203ENST00000396027 SETQ01105 290 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-203ENST00000396027 GNASQ5JWF2 1037 aa4.75□□□□□ -1.65
XRCC4-203ENST00000396027 BEGAINQ9BUH8 593 aa4.75□□□□□ -1.65
XRCC4-203ENST00000396027 GOLGA6L3A6NEY3 463 aa4.74□□□□□ -1.65
XRCC4-203ENST00000396027 SELPP16109 830 aa4.74□□□□□ -1.65
XRCC4-203ENST00000396027 FTSJ3Q8IY81 847 aaKnown RBP4.74□□□□□ -1.65
XRCC4-203ENST00000396027 POU5F2Q8N7G0 328 aa4.74□□□□□ -1.65
XRCC4-203ENST00000396027 CHMP4AQ9BY43 222 aa4.74□□□□□ -1.65
XRCC4-203ENST00000396027 PRR12Q9ULL5 1215 aa4.74□□□□□ -1.65
XRCC4-203ENST00000396027 PHKA2P46019 1235 aa4.73□□□□□ -1.65
XRCC4-203ENST00000396027 COL9A3Q14050 684 aaPredicted RBP4.73□□□□□ -1.65
XRCC4-203ENST00000396027 TUSC1Q2TAM9 212 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms