RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
CXCL12-206ENST00000395795 COL15A1P39059 1388 aa21.67■■□□□ 1.06
CXCL12-206ENST00000395795 A0A0G2JLW4 131 aa21.67■■□□□ 1.06
CXCL12-206ENST00000395795 POLRMTO00411 1230 aaKnown RBP21.67■■□□□ 1.06
CXCL12-206ENST00000395795 USPL1Q5W0Q7 1092 aa21.67■■□□□ 1.06
CXCL12-206ENST00000395795 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
CXCL12-206ENST00000395795 DPEP1P16444 411 aa21.66■■□□□ 1.06
CXCL12-206ENST00000395795 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
CXCL12-206ENST00000395795 TEFQ10587 303 aa21.66■■□□□ 1.06
CXCL12-206ENST00000395795 NARFQ9UHQ1 456 aa21.66■■□□□ 1.06
CXCL12-206ENST00000395795 PARP3Q9Y6F1 533 aa21.66■■□□□ 1.06
CXCL12-206ENST00000395795 MCM10Q7L590 875 aa21.64■■□□□ 1.05
CXCL12-206ENST00000395795 PLEKHF1Q96S99 279 aa21.64■■□□□ 1.05
CXCL12-206ENST00000395795 NRXN2Q9P2S2 1712 aa21.63■■□□□ 1.05
CXCL12-206ENST00000395795 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
CXCL12-206ENST00000395795 NFIXQ14938 502 aa21.63■■□□□ 1.05
CXCL12-206ENST00000395795 TTC5Q8N0Z6 440 aa21.63■■□□□ 1.05
CXCL12-206ENST00000395795 CANXP27824 592 aaKnown RBP21.62■■□□□ 1.05
CXCL12-206ENST00000395795 ATP10DQ9P241 1426 aa21.62■■□□□ 1.05
CXCL12-206ENST00000395795 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
CXCL12-206ENST00000395795 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
CXCL12-206ENST00000395795 ZPR1O75312 459 aa21.6■■□□□ 1.05
CXCL12-206ENST00000395795 STARD3NLO95772 234 aa21.6■■□□□ 1.05
CXCL12-206ENST00000395795 FMNL2Q96PY5 1086 aa21.6■■□□□ 1.05
CXCL12-206ENST00000395795 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
CXCL12-206ENST00000395795 HTATSF1O43719 755 aaKnown RBP21.59■■□□□ 1.05
CXCL12-206ENST00000395795 A1BGP04217 495 aa21.59■■□□□ 1.05
CXCL12-206ENST00000395795 USP16Q9Y5T5 823 aa21.59■■□□□ 1.05
CXCL12-206ENST00000395795 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
CXCL12-206ENST00000395795 CHRNA5P30532 468 aa21.57■■□□□ 1.04
CXCL12-206ENST00000395795 BCS1LQ9Y276 419 aa21.57■■□□□ 1.04
CXCL12-206ENST00000395795 SCN7AQ01118 1682 aa21.56■■□□□ 1.04
CXCL12-206ENST00000395795 IL6STP40189 918 aaPredicted RBP21.56■■□□□ 1.04
CXCL12-206ENST00000395795 C1QTNF8P60827 252 aa21.56■■□□□ 1.04
CXCL12-206ENST00000395795 CARMIL3Q8ND23 1372 aa21.56■■□□□ 1.04
CXCL12-206ENST00000395795 DLG5Q8TDM6 1919 aa21.56■■□□□ 1.04
CXCL12-206ENST00000395795 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
CXCL12-206ENST00000395795 CAMTA2O94983 1202 aa21.54■■□□□ 1.04
CXCL12-206ENST00000395795 SERPINB2P05120 415 aa21.54■■□□□ 1.04
CXCL12-206ENST00000395795 TBC1D9BQ66K14 1250 aa21.54■■□□□ 1.04
CXCL12-206ENST00000395795 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
CXCL12-206ENST00000395795 TBC1D2BQ9UPU7 963 aa21.54■■□□□ 1.04
CXCL12-206ENST00000395795 NBPF26B4DH59 902 aa21.53■■□□□ 1.04
CXCL12-206ENST00000395795 PIP4K2AP48426 406 aaPredicted RBP21.53■■□□□ 1.04
CXCL12-206ENST00000395795 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
CXCL12-206ENST00000395795 NBPF10Q6P3W6 841 aaKnown RBP21.53■■□□□ 1.04
CXCL12-206ENST00000395795 NBPF15Q8N660 670 aa21.53■■□□□ 1.04
CXCL12-206ENST00000395795 MIS18AQ9NYP9 233 aa21.53■■□□□ 1.04
CXCL12-206ENST00000395795 A0A087WZG4 1122 aa21.52■■□□□ 1.04
CXCL12-206ENST00000395795 RALBP1Q15311 655 aa21.52■■□□□ 1.04
CXCL12-206ENST00000395795 TAF7Q15545 349 aaPredicted RBP21.52■■□□□ 1.04
CXCL12-206ENST00000395795 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
CXCL12-206ENST00000395795 SNRPA1P09661 255 aaKnown RBP21.51■■□□□ 1.03
CXCL12-206ENST00000395795 NFE2L2Q16236 605 aa21.51■■□□□ 1.03
CXCL12-206ENST00000395795 THUMPD2Q9BTF0 503 aaKnown RBP21.51■■□□□ 1.03
CXCL12-206ENST00000395795 KDM3BQ7LBC6 1761 aa21.51■■□□□ 1.03
CXCL12-206ENST00000395795 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
CXCL12-206ENST00000395795 BCORQ6W2J9 1755 aa21.5■■□□□ 1.03
CXCL12-206ENST00000395795 ANKRD31Q8N7Z5 1873 aa21.49■■□□□ 1.03
CXCL12-206ENST00000395795 DLEC1Q9Y238 1755 aa21.49■■□□□ 1.03
CXCL12-206ENST00000395795 BICDL1Q6ZP65 573 aa21.49■■□□□ 1.03
CXCL12-206ENST00000395795 DALRD3Q5D0E6 543 aaKnown RBP21.48■■□□□ 1.03
CXCL12-206ENST00000395795 ARHGAP27Q6ZUM4 889 aa21.48■■□□□ 1.03
CXCL12-206ENST00000395795 PRR5LQ6MZQ0 368 aa21.47■■□□□ 1.03
CXCL12-206ENST00000395795 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
CXCL12-206ENST00000395795 DZIP3Q86Y13 1208 aaKnown RBP21.46■■□□□ 1.03
CXCL12-206ENST00000395795 KIF3CO14782 793 aa21.45■■□□□ 1.02
CXCL12-206ENST00000395795 PRELPP51888 382 aa21.45■■□□□ 1.02
CXCL12-206ENST00000395795 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
CXCL12-206ENST00000395795 ZNF526Q8TF50 670 aaPredicted RBP21.45■■□□□ 1.02
CXCL12-206ENST00000395795 GPBP1L1Q9HC44 474 aaPredicted RBP21.45■■□□□ 1.02
CXCL12-206ENST00000395795 MYBBP1AQ9BQG0 1328 aaKnown RBP21.45■■□□□ 1.02
CXCL12-206ENST00000395795 CCDC24Q8N4L8 307 aa21.44■■□□□ 1.02
CXCL12-206ENST00000395795 COL11A2P13942 1736 aaPredicted RBP21.43■■□□□ 1.02
CXCL12-206ENST00000395795 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
CXCL12-206ENST00000395795 SBF1O95248 1867 aa21.42■■□□□ 1.02
CXCL12-206ENST00000395795 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
CXCL12-206ENST00000395795 C2CD5Q86YS7 1000 aa21.42■■□□□ 1.02
CXCL12-206ENST00000395795 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
CXCL12-206ENST00000395795 PNISRQ8TF01 805 aaKnown RBP21.41■■□□□ 1.02
CXCL12-206ENST00000395795 BRIP1Q9BX63 1249 aa21.41■■□□□ 1.02
CXCL12-206ENST00000395795 RGL2O15211 777 aa21.4■■□□□ 1.02
CXCL12-206ENST00000395795 TMPOP42166 694 aaKnown RBP21.4■■□□□ 1.02
CXCL12-206ENST00000395795 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
CXCL12-206ENST00000395795 HLFQ16534 295 aa21.39■■□□□ 1.01
CXCL12-206ENST00000395795 TTLL6Q8N841 843 aa21.39■■□□□ 1.01
CXCL12-206ENST00000395795 SETDB2Q96T68 719 aa21.39■■□□□ 1.01
CXCL12-206ENST00000395795 PNNQ9H307 717 aaKnown RBP21.39■■□□□ 1.01
CXCL12-206ENST00000395795 NEFMP07197 916 aa21.38■■□□□ 1.01
CXCL12-206ENST00000395795 RIPK4P57078 832 aa21.38■■□□□ 1.01
CXCL12-206ENST00000395795 RASSF7Q02833 373 aa21.38■■□□□ 1.01
CXCL12-206ENST00000395795 LRP10Q7Z4F1 713 aa21.38■■□□□ 1.01
CXCL12-206ENST00000395795 PRKRIP1Q9H875 184 aaPredicted RBP21.38■■□□□ 1.01
CXCL12-206ENST00000395795 SENP3-EIF4A1A0A087X0R7 540 aa21.37■■□□□ 1.01
CXCL12-206ENST00000395795 H0YIN7 160 aa21.37■■□□□ 1.01
CXCL12-206ENST00000395795 NFKBIEO00221 500 aa21.37■■□□□ 1.01
CXCL12-206ENST00000395795 CNBD1Q8NA66 436 aa21.36■■□□□ 1.01
CXCL12-206ENST00000395795 NMRK2Q9NPI5 230 aa21.36■■□□□ 1.01
CXCL12-206ENST00000395795 KLRG2A4D1S0 409 aaPredicted RBP21.35■■□□□ 1.01
CXCL12-206ENST00000395795 PDE6BP35913 854 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms