RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
CXCL1-201ENST00000395761 SPON1Q9HCB6 807 aa21.66■■□□□ 1.06
CXCL1-201ENST00000395761 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
CXCL1-201ENST00000395761 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
CXCL1-201ENST00000395761 STARD3NLO95772 234 aa21.65■■□□□ 1.06
CXCL1-201ENST00000395761 TRAPPC3LQ5T215 181 aa21.65■■□□□ 1.06
CXCL1-201ENST00000395761 SLC16A10Q8TF71 515 aa21.65■■□□□ 1.06
CXCL1-201ENST00000395761 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
CXCL1-201ENST00000395761 ZBTB1Q9Y2K1 713 aa21.65■■□□□ 1.06
CXCL1-201ENST00000395761 ARHGEF1Q92888 912 aaKnown RBP21.64■■□□□ 1.05
CXCL1-201ENST00000395761 GIGYF1O75420 1035 aaPredicted RBP21.63■■□□□ 1.05
CXCL1-201ENST00000395761 A1BGP04217 495 aa21.63■■□□□ 1.05
CXCL1-201ENST00000395761 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
CXCL1-201ENST00000395761 PTGER2P43116 358 aa21.63■■□□□ 1.05
CXCL1-201ENST00000395761 CCDC27Q2M243 656 aa21.63■■□□□ 1.05
CXCL1-201ENST00000395761 WWC1Q8IX03 1113 aa21.63■■□□□ 1.05
CXCL1-201ENST00000395761 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
CXCL1-201ENST00000395761 CFAP44Q96MT7 982 aa21.62■■□□□ 1.05
CXCL1-201ENST00000395761 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
CXCL1-201ENST00000395761 MSL1Q68DK7 614 aa21.61■■□□□ 1.05
CXCL1-201ENST00000395761 SRCAPQ6ZRS2 3230 aa21.6■■□□□ 1.05
CXCL1-201ENST00000395761 ADRA2BP18089 450 aa21.6■■□□□ 1.05
CXCL1-201ENST00000395761 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
CXCL1-201ENST00000395761 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
CXCL1-201ENST00000395761 SGIP1Q9BQI5 828 aa21.6■■□□□ 1.05
CXCL1-201ENST00000395761 MBIPQ9NS73 344 aa21.6■■□□□ 1.05
CXCL1-201ENST00000395761 LRP5O75197 1615 aa21.59■■□□□ 1.05
CXCL1-201ENST00000395761 RFC4P35249 363 aa21.59■■□□□ 1.05
CXCL1-201ENST00000395761 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
CXCL1-201ENST00000395761 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
CXCL1-201ENST00000395761 IFT57Q9NWB7 429 aa21.59■■□□□ 1.05
CXCL1-201ENST00000395761 GNAI1P63096 354 aa21.58■■□□□ 1.05
CXCL1-201ENST00000395761 SRP68Q9UHB9 627 aaKnown RBP21.58■■□□□ 1.05
CXCL1-201ENST00000395761 EIF5P55010 431 aaKnown RBP21.57■■□□□ 1.04
CXCL1-201ENST00000395761 NBPF26B4DH59 902 aa21.56■■□□□ 1.04
CXCL1-201ENST00000395761 NBPF10Q6P3W6 841 aaKnown RBP21.56■■□□□ 1.04
CXCL1-201ENST00000395761 NBPF15Q8N660 670 aa21.56■■□□□ 1.04
CXCL1-201ENST00000395761 ZNF330Q9Y3S2 320 aaPredicted RBP21.56■■□□□ 1.04
CXCL1-201ENST00000395761 IL6STP40189 918 aaPredicted RBP21.55■■□□□ 1.04
CXCL1-201ENST00000395761 COL15A1P39059 1388 aa21.55■■□□□ 1.04
CXCL1-201ENST00000395761 GYS1P13807 737 aa21.54■■□□□ 1.04
CXCL1-201ENST00000395761 USP42Q9H9J4 1324 aaKnown RBP21.54■■□□□ 1.04
CXCL1-201ENST00000395761 C4AP0C0L4 1744 aa21.53■■□□□ 1.04
CXCL1-201ENST00000395761 EIF2S2P20042 333 aaKnown RBP21.53■■□□□ 1.04
CXCL1-201ENST00000395761 POLD1P28340 1107 aa21.53■■□□□ 1.04
CXCL1-201ENST00000395761 WDR63Q8IWG1 891 aa21.53■■□□□ 1.04
CXCL1-201ENST00000395761 TSR2Q969E8 191 aaKnown RBP21.53■■□□□ 1.04
CXCL1-201ENST00000395761 IL16Q14005 1332 aa21.53■■□□□ 1.04
CXCL1-201ENST00000395761 USPL1Q5W0Q7 1092 aa21.52■■□□□ 1.04
CXCL1-201ENST00000395761 ARXQ96QS3 562 aa21.52■■□□□ 1.04
CXCL1-201ENST00000395761 PPP1R1BQ9UD71 204 aaPredicted RBP21.52■■□□□ 1.04
CXCL1-201ENST00000395761 NARFQ9UHQ1 456 aa21.52■■□□□ 1.04
CXCL1-201ENST00000395761 TBC1D2BQ9UPU7 963 aa21.52■■□□□ 1.04
CXCL1-201ENST00000395761 COL24A1Q17RW2 1714 aa21.52■■□□□ 1.03
CXCL1-201ENST00000395761 ZPR1O75312 459 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 FKBP8Q14318 412 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 NLGN1Q8N2Q7 840 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 BCL2L12Q9HB09 334 aa21.51■■□□□ 1.03
CXCL1-201ENST00000395761 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
CXCL1-201ENST00000395761 A0A087WZG4 1122 aa21.5■■□□□ 1.03
CXCL1-201ENST00000395761 C8orf58Q8NAV2 365 aa21.5■■□□□ 1.03
CXCL1-201ENST00000395761 LAMB4A4D0S4 1761 aa21.5■■□□□ 1.03
CXCL1-201ENST00000395761 ELL2O00472 640 aaPredicted RBP21.49■■□□□ 1.03
CXCL1-201ENST00000395761 ZNF521Q96K83 1311 aa21.49■■□□□ 1.03
CXCL1-201ENST00000395761 MMP10P09238 476 aa21.48■■□□□ 1.03
CXCL1-201ENST00000395761 MYL6BP14649 208 aa21.48■■□□□ 1.03
CXCL1-201ENST00000395761 PDIA6Q15084 440 aa21.48■■□□□ 1.03
CXCL1-201ENST00000395761 ANXA1P04083 346 aa21.47■■□□□ 1.03
CXCL1-201ENST00000395761 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
CXCL1-201ENST00000395761 NPM2Q86SE8 214 aaKnown RBP21.47■■□□□ 1.03
CXCL1-201ENST00000395761 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
CXCL1-201ENST00000395761 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
CXCL1-201ENST00000395761 CAMTA2O94983 1202 aa21.46■■□□□ 1.03
CXCL1-201ENST00000395761 HOXB7P09629 217 aa21.46■■□□□ 1.03
CXCL1-201ENST00000395761 FHDC1Q9C0D6 1143 aaPredicted RBP21.46■■□□□ 1.03
CXCL1-201ENST00000395761 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
CXCL1-201ENST00000395761 HDGFL1Q5TGJ6 251 aa21.45■■□□□ 1.02
CXCL1-201ENST00000395761 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
CXCL1-201ENST00000395761 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
CXCL1-201ENST00000395761 TM4SF1P30408 202 aa21.44■■□□□ 1.02
CXCL1-201ENST00000395761 TTLL7Q6ZT98 887 aa21.44■■□□□ 1.02
CXCL1-201ENST00000395761 DDR1Q08345 913 aa21.43■■□□□ 1.02
CXCL1-201ENST00000395761 NFIXQ14938 502 aa21.43■■□□□ 1.02
CXCL1-201ENST00000395761 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
CXCL1-201ENST00000395761 CHPF2Q9P2E5 772 aa21.43■■□□□ 1.02
CXCL1-201ENST00000395761 SYT17Q9BSW7 474 aa21.42■■□□□ 1.02
CXCL1-201ENST00000395761 GOLGA2Q08379 1002 aa21.41■■□□□ 1.02
CXCL1-201ENST00000395761 TBC1D9BQ66K14 1250 aa21.41■■□□□ 1.02
CXCL1-201ENST00000395761 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
CXCL1-201ENST00000395761 DDX21Q9NR30 783 aaKnown RBP eCLIP21.41■■□□□ 1.02
CXCL1-201ENST00000395761 PARP3Q9Y6F1 533 aa21.41■■□□□ 1.02
CXCL1-201ENST00000395761 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
CXCL1-201ENST00000395761 EXOSC9Q06265 439 aaKnown RBP21.4■■□□□ 1.02
CXCL1-201ENST00000395761 HLFQ16534 295 aa21.4■■□□□ 1.02
CXCL1-201ENST00000395761 MYH16Q9H6N6 1097 aa21.4■■□□□ 1.02
CXCL1-201ENST00000395761 TWISTNBQ3B726 338 aaPredicted RBP21.39■■□□□ 1.01
CXCL1-201ENST00000395761 XAGE3Q8WTP9 111 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms