RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
SMARCAD1-203ENST00000394961 SNED1Q8TER0 1413 aa8.47□□□□□ -1.05
SMARCAD1-203ENST00000394961 APLP1P51693 650 aa8.47□□□□□ -1.05
SMARCAD1-203ENST00000394961 GAS2L2Q8NHY3 880 aa8.47□□□□□ -1.05
SMARCAD1-203ENST00000394961 RFC4P35249 363 aa8.46□□□□□ -1.05
SMARCAD1-203ENST00000394961 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.05
SMARCAD1-203ENST00000394961 DIAPH1O60610 1272 aaKnown RBP8.46□□□□□ -1.06
SMARCAD1-203ENST00000394961 DDR1Q08345 913 aa8.46□□□□□ -1.06
SMARCAD1-203ENST00000394961 AEBP1Q8IUX7 1158 aa8.46□□□□□ -1.06
SMARCAD1-203ENST00000394961 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.06
SMARCAD1-203ENST00000394961 PIM2Q9P1W9 311 aa8.46□□□□□ -1.06
SMARCAD1-203ENST00000394961 TOMM70O94826 608 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 KLRG2A4D1S0 409 aaPredicted RBP8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 IL6STP40189 918 aaPredicted RBP8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 NFATC2IPQ8NCF5 419 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 SLX4Q8IY92 1834 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 MSH5O43196 834 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 JMYQ8N9B5 988 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 BCL2L12Q9HB09 334 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 CARMIL3Q8ND23 1372 aa8.45□□□□□ -1.06
SMARCAD1-203ENST00000394961 SENP3-EIF4A1A0A087X0R7 540 aa8.44□□□□□ -1.06
SMARCAD1-203ENST00000394961 DPEP1P16444 411 aa8.44□□□□□ -1.06
SMARCAD1-203ENST00000394961 LAMB1P07942 1786 aa8.44□□□□□ -1.06
SMARCAD1-203ENST00000394961 PSME4Q14997 1843 aa8.44□□□□□ -1.06
SMARCAD1-203ENST00000394961 PHF14O94880 888 aa8.44□□□□□ -1.06
SMARCAD1-203ENST00000394961 MTHFSDQ2M296 383 aaKnown RBP8.44□□□□□ -1.06
SMARCAD1-203ENST00000394961 IFFO2Q5TF58 517 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 PPM1GO15355 546 aaPredicted RBP8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 DALRD3Q5D0E6 543 aaKnown RBP8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 STYK1Q6J9G0 422 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 CLEC4GQ6UXB4 293 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 RSPH6AQ9H0K4 717 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 TRPM7Q96QT4 1865 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 GNAT3A8MTJ3 354 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
SMARCAD1-203ENST00000394961 FKBP8Q14318 412 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 DNAJC5GQ8N7S2 189 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 BABAM1Q9NWV8 329 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 SOGA3Q5TF21 947 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 RBM42Q9BTD8 480 aaKnown RBP8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 ERBB4Q15303 1308 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 STARD3NLO95772 234 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 DNAJC10Q8IXB1 793 aa8.42□□□□□ -1.06
SMARCAD1-203ENST00000394961 FCHSD2O94868 740 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 NFIXQ14938 502 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 ZNF790Q6PG37 636 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 ZPR1O75312 459 aa8.41□□□□□ -1.06
SMARCAD1-203ENST00000394961 IL17REQ8NFR9 667 aa8.4□□□□□ -1.06
SMARCAD1-203ENST00000394961 PDE6BP35913 854 aa8.4□□□□□ -1.06
SMARCAD1-203ENST00000394961 FMNL2Q96PY5 1086 aa8.4□□□□□ -1.06
SMARCAD1-203ENST00000394961 RNF123Q5XPI4 1314 aa8.4□□□□□ -1.07
SMARCAD1-203ENST00000394961 CAMTA2O94983 1202 aa8.4□□□□□ -1.07
SMARCAD1-203ENST00000394961 LMNB1P20700 586 aa8.4□□□□□ -1.07
SMARCAD1-203ENST00000394961 ZNF646O15015 1829 aaPredicted RBP8.4□□□□□ -1.07
SMARCAD1-203ENST00000394961 A0A0G2JLW4 131 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 CFAP53Q96M91 514 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 ZBTB1Q9Y2K1 713 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 SRP68Q9UHB9 627 aaKnown RBP8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 DUOX1Q9NRD9 1551 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 SERPINB2P05120 415 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
SMARCAD1-203ENST00000394961 ZNF609O15014 1411 aa8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 L3MBTL3Q96JM7 780 aaPredicted RBP8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 VPS33BQ9H267 617 aa8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 GLTPD2A6NH11 291 aa8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 ERVV-1B6SEH8 477 aa8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 SMC1BQ8NDV3 1235 aa8.38□□□□□ -1.07
SMARCAD1-203ENST00000394961 C7orf43Q8WVR3 580 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 BCS1LQ9Y276 419 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 TTC5Q8N0Z6 440 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 NUDCQ9Y266 331 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 TNNT2P45379 298 aaPredicted RBP8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 CNKSR1Q969H4 720 aa8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 ZNF496Q96IT1 587 aaPredicted RBP8.37□□□□□ -1.07
SMARCAD1-203ENST00000394961 PTCD1O75127 700 aaKnown RBP8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 PPP2R1AP30153 589 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 ARHGAP27Q6ZUM4 889 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 KLRG1Q96E93 195 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 PLEKHF1Q96S99 279 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 PNNQ9H307 717 aaKnown RBP8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 H0YIN7 160 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 NFKBIEO00221 500 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 PRR5LQ6MZQ0 368 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 PRELPP51888 382 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 ZNF652Q9Y2D9 606 aa8.36□□□□□ -1.07
SMARCAD1-203ENST00000394961 TEFQ10587 303 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms