RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 PCNTO95613 3336 aa26.91■■□□□ 1.9
UPK3B-203ENST00000394849 COL13A1Q5TAT6 717 aaPredicted RBP26.9■■□□□ 1.9
UPK3B-203ENST00000394849 SLC52A2Q9HAB3 445 aa26.9■■□□□ 1.9
UPK3B-203ENST00000394849 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
UPK3B-203ENST00000394849 DNAJC10Q8IXB1 793 aa26.89■■□□□ 1.9
UPK3B-203ENST00000394849 AFDNP55196 1824 aaKnown RBP26.88■■□□□ 1.89
UPK3B-203ENST00000394849 NRXN2Q9P2S2 1712 aa26.87■■□□□ 1.89
UPK3B-203ENST00000394849 CYP19A1P11511 503 aaPredicted RBP26.87■■□□□ 1.89
UPK3B-203ENST00000394849 IL13P35225 146 aa26.87■■□□□ 1.89
UPK3B-203ENST00000394849 NFIXQ14938 502 aa26.87■■□□□ 1.89
UPK3B-203ENST00000394849 TTLL6Q8N841 843 aa26.87■■□□□ 1.89
UPK3B-203ENST00000394849 CLSPNQ9HAW4 1339 aa26.87■■□□□ 1.89
UPK3B-203ENST00000394849 DLEC1Q9Y238 1755 aa26.86■■□□□ 1.89
UPK3B-203ENST00000394849 EIF4G2P78344 907 aaKnown RBP eCLIP26.86■■□□□ 1.89
UPK3B-203ENST00000394849 VSIG10Q8N0Z9 540 aa26.86■■□□□ 1.89
UPK3B-203ENST00000394849 COL15A1P39059 1388 aa26.85■■□□□ 1.89
UPK3B-203ENST00000394849 SERPINB2P05120 415 aa26.84■■□□□ 1.89
UPK3B-203ENST00000394849 RASSF7Q02833 373 aa26.84■■□□□ 1.89
UPK3B-203ENST00000394849 TNS4Q8IZW8 715 aa26.84■■□□□ 1.89
UPK3B-203ENST00000394849 MRC1P22897 1456 aa26.84■■□□□ 1.89
UPK3B-203ENST00000394849 H0YIN7 160 aa26.83■■□□□ 1.89
UPK3B-203ENST00000394849 PDZRN3Q9UPQ7 1066 aa26.83■■□□□ 1.89
UPK3B-203ENST00000394849 KNSTRNQ9Y448 316 aa26.83■■□□□ 1.89
UPK3B-203ENST00000394849 RNMTO43148 476 aaKnown RBP26.81■■□□□ 1.88
UPK3B-203ENST00000394849 DPY19L2Q6NUT2 758 aa26.81■■□□□ 1.88
UPK3B-203ENST00000394849 LGR6Q9HBX8 967 aa26.81■■□□□ 1.88
UPK3B-203ENST00000394849 CCDC88AQ3V6T2 1871 aa26.81■■□□□ 1.88
UPK3B-203ENST00000394849 C2CD5Q86YS7 1000 aa26.8■■□□□ 1.88
UPK3B-203ENST00000394849 ZBTB1Q9Y2K1 713 aa26.8■■□□□ 1.88
UPK3B-203ENST00000394849 VIRMAQ69YN4 1812 aaKnown RBP26.79■■□□□ 1.88
UPK3B-203ENST00000394849 PRELPP51888 382 aa26.79■■□□□ 1.88
UPK3B-203ENST00000394849 TIAM2Q8IVF5 1701 aa26.79■■□□□ 1.88
UPK3B-203ENST00000394849 A0A087WZG4 1122 aa26.78■■□□□ 1.88
UPK3B-203ENST00000394849 SLC39A6Q13433 755 aa26.78■■□□□ 1.88
UPK3B-203ENST00000394849 BCL2L12Q9HB09 334 aa26.78■■□□□ 1.88
UPK3B-203ENST00000394849 STARD3NLO95772 234 aa26.77■■□□□ 1.88
UPK3B-203ENST00000394849 HSPA5P11021 654 aaKnown RBP26.77■■□□□ 1.88
UPK3B-203ENST00000394849 NFKBIEO00221 500 aa26.74■■□□□ 1.87
UPK3B-203ENST00000394849 PDE6BP35913 854 aa26.74■■□□□ 1.87
UPK3B-203ENST00000394849 CAPN15O75808 1086 aa26.73■■□□□ 1.87
UPK3B-203ENST00000394849 HSPA1AP0DMV8 641 aaKnown RBP26.73■■□□□ 1.87
UPK3B-203ENST00000394849 HSPA1BP0DMV9 641 aaKnown RBP26.73■■□□□ 1.87
UPK3B-203ENST00000394849 EIF5P55010 431 aaKnown RBP26.73■■□□□ 1.87
UPK3B-203ENST00000394849 TTC5Q8N0Z6 440 aa26.73■■□□□ 1.87
UPK3B-203ENST00000394849 BRIP1Q9BX63 1249 aa26.73■■□□□ 1.87
UPK3B-203ENST00000394849 UBR2Q8IWV8 1755 aa26.73■■□□□ 1.87
UPK3B-203ENST00000394849 DICER1Q9UPY3 1922 aaKnown RBP26.73■■□□□ 1.87
UPK3B-203ENST00000394849 CANXP27824 592 aaKnown RBP26.72■■□□□ 1.87
UPK3B-203ENST00000394849 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
UPK3B-203ENST00000394849 TEX13AQ9BXU3 409 aaPredicted RBP26.72■■□□□ 1.87
UPK3B-203ENST00000394849 HMOX1P09601 288 aa26.7■■□□□ 1.86
UPK3B-203ENST00000394849 MTHFSDQ2M296 383 aaKnown RBP26.7■■□□□ 1.86
UPK3B-203ENST00000394849 ERFEQ4G0M1 354 aa26.7■■□□□ 1.86
UPK3B-203ENST00000394849 CARMIL3Q8ND23 1372 aa26.7■■□□□ 1.86
UPK3B-203ENST00000394849 POTECB2RU33 542 aa26.69■■□□□ 1.86
UPK3B-203ENST00000394849 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
UPK3B-203ENST00000394849 BICDL1Q6ZP65 573 aa26.69■■□□□ 1.86
UPK3B-203ENST00000394849 ZNF622Q969S3 477 aaKnown RBP eCLIP26.69■■□□□ 1.86
UPK3B-203ENST00000394849 LTBP3Q9NS15 1303 aa26.68■■□□□ 1.86
UPK3B-203ENST00000394849 FER1L6Q2WGJ9 1857 aa26.68■■□□□ 1.86
UPK3B-203ENST00000394849 CREBZFQ9NS37 354 aa26.67■■□□□ 1.86
UPK3B-203ENST00000394849 ANKRD31Q8N7Z5 1873 aa26.66■■□□□ 1.86
UPK3B-203ENST00000394849 DIAPH1O60610 1272 aaKnown RBP26.66■■□□□ 1.86
UPK3B-203ENST00000394849 SOGA3Q5TF21 947 aa26.66■■□□□ 1.86
UPK3B-203ENST00000394849 TBC1D9BQ66K14 1250 aa26.66■■□□□ 1.86
UPK3B-203ENST00000394849 NPM2Q86SE8 214 aaKnown RBP26.66■■□□□ 1.86
UPK3B-203ENST00000394849 C21orf2O43822 256 aa26.65■■□□□ 1.86
UPK3B-203ENST00000394849 IL6STP40189 918 aaPredicted RBP26.65■■□□□ 1.86
UPK3B-203ENST00000394849 CHADLQ6NUI6 762 aa26.65■■□□□ 1.86
UPK3B-203ENST00000394849 CNKSR1Q969H4 720 aa26.65■■□□□ 1.86
UPK3B-203ENST00000394849 TAOK3Q9H2K8 898 aa26.65■■□□□ 1.86
UPK3B-203ENST00000394849 SCN7AQ01118 1682 aa26.64■■□□□ 1.86
UPK3B-203ENST00000394849 HEG1Q9ULI3 1381 aa26.63■■□□□ 1.85
UPK3B-203ENST00000394849 TEFQ10587 303 aa26.63■■□□□ 1.85
UPK3B-203ENST00000394849 PRR5LQ6MZQ0 368 aa26.63■■□□□ 1.85
UPK3B-203ENST00000394849 ZNF790Q6PG37 636 aa26.63■■□□□ 1.85
UPK3B-203ENST00000394849 STYK1Q6J9G0 422 aa26.62■■□□□ 1.85
UPK3B-203ENST00000394849 SETDB2Q96T68 719 aa26.62■■□□□ 1.85
UPK3B-203ENST00000394849 NPHP1O15259 732 aa26.61■■□□□ 1.85
UPK3B-203ENST00000394849 CNBD1Q8NA66 436 aa26.61■■□□□ 1.85
UPK3B-203ENST00000394849 ZNF496Q96IT1 587 aaPredicted RBP26.61■■□□□ 1.85
UPK3B-203ENST00000394849 IQCA1LA6NCM1 817 aa26.6■■□□□ 1.85
UPK3B-203ENST00000394849 ST5P78524 1137 aa26.6■■□□□ 1.85
UPK3B-203ENST00000394849 GAS2L2Q8NHY3 880 aa26.6■■□□□ 1.85
UPK3B-203ENST00000394849 COL11A2P13942 1736 aaPredicted RBP26.59■■□□□ 1.85
UPK3B-203ENST00000394849 GNAT3A8MTJ3 354 aa26.59■■□□□ 1.85
UPK3B-203ENST00000394849 FMNL2Q96PY5 1086 aa26.59■■□□□ 1.85
UPK3B-203ENST00000394849 ZNF219Q9P2Y4 722 aaPredicted RBP26.59■■□□□ 1.85
UPK3B-203ENST00000394849 TBC1D2BQ9UPU7 963 aa26.59■■□□□ 1.85
UPK3B-203ENST00000394849 ZNF330Q9Y3S2 320 aaPredicted RBP26.58■■□□□ 1.85
UPK3B-203ENST00000394849 SRGNP10124 158 aa26.57■■□□□ 1.84
UPK3B-203ENST00000394849 MASTLQ96GX5 879 aa26.57■■□□□ 1.84
UPK3B-203ENST00000394849 ARFGEF2Q9Y6D5 1785 aa26.56■■□□□ 1.84
UPK3B-203ENST00000394849 PRPF40BQ6NWY9 871 aaKnown RBP26.56■■□□□ 1.84
UPK3B-203ENST00000394849 SIPA1L3O60292 1781 aaPredicted RBP26.56■■□□□ 1.84
UPK3B-203ENST00000394849 SCN4AP35499 1836 aa26.55■■□□□ 1.84
UPK3B-203ENST00000394849 SLX4Q8IY92 1834 aa26.55■■□□□ 1.84
UPK3B-203ENST00000394849 DDNO94850 711 aaPredicted RBP26.55■■□□□ 1.84
UPK3B-203ENST00000394849 LDHDQ86WU2 507 aa26.55■■□□□ 1.84
UPK3B-203ENST00000394849 IL17REQ8NFR9 667 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms