RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
PTBP1-204ENST00000394601 GBP4Q96PP9 640 aa18.99■□□□□ 0.63
PTBP1-204ENST00000394601 LRRFIP2Q9Y608 721 aaKnown RBP18.99■□□□□ 0.63
PTBP1-204ENST00000394601 PTMAP06454 111 aaKnown RBP18.99■□□□□ 0.63
PTBP1-204ENST00000394601 GNAI3P08754 354 aa18.99■□□□□ 0.63
PTBP1-204ENST00000394601 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
PTBP1-204ENST00000394601 IL17RAQ96F46 866 aa18.98■□□□□ 0.63
PTBP1-204ENST00000394601 KCNQ3O43525 872 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 SSH3Q8TE77 659 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 CHAMP1Q96JM3 812 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 LRRCC1Q9C099 1032 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 POLA2Q14181 598 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 ERC2O15083 957 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 PKP1Q13835 747 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 MCTP1Q6DN14 999 aa18.97■□□□□ 0.63
PTBP1-204ENST00000394601 UNC5CLQ8IV45 518 aa18.96■□□□□ 0.63
PTBP1-204ENST00000394601 HEG1Q9ULI3 1381 aa18.96■□□□□ 0.63
PTBP1-204ENST00000394601 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
PTBP1-204ENST00000394601 MX1P20591 662 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 IL25Q9H293 177 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 CBX1P83916 185 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
PTBP1-204ENST00000394601 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 ZDHHC9Q9Y397 364 aa18.95■□□□□ 0.62
PTBP1-204ENST00000394601 ADCY9O60503 1353 aa18.94■□□□□ 0.62
PTBP1-204ENST00000394601 GOLGA6L22H0YM25 854 aa18.94■□□□□ 0.62
PTBP1-204ENST00000394601 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
PTBP1-204ENST00000394601 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
PTBP1-204ENST00000394601 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
PTBP1-204ENST00000394601 REC8O95072 547 aa18.93■□□□□ 0.62
PTBP1-204ENST00000394601 HOXB7P09629 217 aa18.93■□□□□ 0.62
PTBP1-204ENST00000394601 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.93■□□□□ 0.62
PTBP1-204ENST00000394601 BAG4O95429 457 aaKnown RBP18.93■□□□□ 0.62
PTBP1-204ENST00000394601 CHMLP26374 656 aa18.93■□□□□ 0.62
PTBP1-204ENST00000394601 ZGPATQ8N5A5 531 aaKnown RBP18.93■□□□□ 0.62
PTBP1-204ENST00000394601 ARHGEF25Q86VW2 580 aa18.93■□□□□ 0.62
PTBP1-204ENST00000394601 OVOS2A0A0G2JMS6 1433 aa18.92■□□□□ 0.62
PTBP1-204ENST00000394601 CHPF2Q9P2E5 772 aa18.92■□□□□ 0.62
PTBP1-204ENST00000394601 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
PTBP1-204ENST00000394601 MST1RQ04912 1400 aa18.92■□□□□ 0.62
PTBP1-204ENST00000394601 NBPF7P0C2Y1 421 aaPredicted RBP18.92■□□□□ 0.62
PTBP1-204ENST00000394601 ESCO1Q5FWF5 840 aa18.92■□□□□ 0.62
PTBP1-204ENST00000394601 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
PTBP1-204ENST00000394601 RBM27Q9P2N5 1060 aaKnown RBP18.91■□□□□ 0.62
PTBP1-204ENST00000394601 ALS2Q96Q42 1657 aa18.91■□□□□ 0.62
PTBP1-204ENST00000394601 AOX1Q06278 1338 aa18.91■□□□□ 0.62
PTBP1-204ENST00000394601 ORAI2Q96SN7 254 aa18.91■□□□□ 0.62
PTBP1-204ENST00000394601 AKAP4Q5JQC9 854 aa18.91■□□□□ 0.62
PTBP1-204ENST00000394601 KCNH5Q8NCM2 988 aa18.91■□□□□ 0.62
PTBP1-204ENST00000394601 PI4K2BQ8TCG2 481 aa18.91■□□□□ 0.62
PTBP1-204ENST00000394601 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
PTBP1-204ENST00000394601 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
PTBP1-204ENST00000394601 C14orf37Q86TY3 774 aa18.9■□□□□ 0.62
PTBP1-204ENST00000394601 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.62
PTBP1-204ENST00000394601 AXIN2Q9Y2T1 843 aa18.89■□□□□ 0.62
PTBP1-204ENST00000394601 GCP02774 474 aa18.89■□□□□ 0.61
PTBP1-204ENST00000394601 PSME1Q06323 249 aa18.89■□□□□ 0.61
PTBP1-204ENST00000394601 OFD1O75665 1012 aa18.89■□□□□ 0.61
PTBP1-204ENST00000394601 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
PTBP1-204ENST00000394601 SKOR2Q2VWA4 1001 aaPredicted RBP18.88■□□□□ 0.61
PTBP1-204ENST00000394601 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
PTBP1-204ENST00000394601 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 SRCIN1Q9C0H9 1055 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 SPDYE4A6NLX3 237 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 RNMTO43148 476 aaKnown RBP18.87■□□□□ 0.61
PTBP1-204ENST00000394601 BBXQ8WY36 941 aaPredicted RBP18.87■□□□□ 0.61
PTBP1-204ENST00000394601 C5P01031 1676 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 ANXA1P04083 346 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
PTBP1-204ENST00000394601 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
PTBP1-204ENST00000394601 ZNF830Q96NB3 372 aaPredicted RBP18.87■□□□□ 0.61
PTBP1-204ENST00000394601 IL1RAPL2Q9NP60 686 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
PTBP1-204ENST00000394601 ST18O60284 1047 aa18.86■□□□□ 0.61
PTBP1-204ENST00000394601 CWC22Q9HCG8 908 aaKnown RBP18.86■□□□□ 0.61
PTBP1-204ENST00000394601 PROSER3Q2NL68 480 aa18.86■□□□□ 0.61
PTBP1-204ENST00000394601 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
PTBP1-204ENST00000394601 DNAAF4Q8WXU2 420 aa18.86■□□□□ 0.61
PTBP1-204ENST00000394601 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
PTBP1-204ENST00000394601 COL18A1P39060 1754 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 SCN11AQ9UI33 1791 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 NUCB2P80303 420 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 CUL4AQ13619 759 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
PTBP1-204ENST00000394601 RHPN1Q8TCX5 695 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 PRPF40AO75400 957 aaKnown RBP18.85■□□□□ 0.61
PTBP1-204ENST00000394601 PTMSP20962 102 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 MTX1Q13505 466 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 NUTM1Q86Y26 1132 aa18.85■□□□□ 0.61
PTBP1-204ENST00000394601 GIGYF1O75420 1035 aaPredicted RBP18.84■□□□□ 0.61
PTBP1-204ENST00000394601 ANAPC15P60006 121 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms