RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PDIA6Q15084 440 aa18.75■□□□□ 0.59
CCT4-201ENST00000394440 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCT4-201ENST00000394440 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
CCT4-201ENST00000394440 ITGB4P16144 1822 aa18.74■□□□□ 0.59
CCT4-201ENST00000394440 GNAI3P08754 354 aa18.74■□□□□ 0.59
CCT4-201ENST00000394440 TTC5Q8N0Z6 440 aa18.74■□□□□ 0.59
CCT4-201ENST00000394440 DNAAF4Q8WXU2 420 aa18.74■□□□□ 0.59
CCT4-201ENST00000394440 PI4KAP2A4QPH2 592 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 PI4KAP1Q8N8J0 262 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 HYPKQ9NX55 129 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 TNS2Q63HR2 1409 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 FMNL2Q96PY5 1086 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 USP44Q9H0E7 712 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 RGS17Q9UGC6 210 aaPredicted RBP18.73■□□□□ 0.59
CCT4-201ENST00000394440 LRP6O75581 1613 aa18.73■□□□□ 0.59
CCT4-201ENST00000394440 GNAI2P04899 355 aa18.72■□□□□ 0.59
CCT4-201ENST00000394440 SNRPA1P09661 255 aaKnown RBP18.72■□□□□ 0.59
CCT4-201ENST00000394440 BEND3Q5T5X7 828 aa18.72■□□□□ 0.59
CCT4-201ENST00000394440 LNPKQ9C0E8 428 aa18.72■□□□□ 0.59
CCT4-201ENST00000394440 USP35Q9P2H5 1018 aa18.72■□□□□ 0.59
CCT4-201ENST00000394440 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
CCT4-201ENST00000394440 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
CCT4-201ENST00000394440 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
CCT4-201ENST00000394440 LRP10Q7Z4F1 713 aa18.7■□□□□ 0.58
CCT4-201ENST00000394440 KSR2Q6VAB6 950 aa18.7■□□□□ 0.58
CCT4-201ENST00000394440 USP16Q9Y5T5 823 aa18.69■□□□□ 0.58
CCT4-201ENST00000394440 SPATA31A6Q5VVP1 1343 aa18.69■□□□□ 0.58
CCT4-201ENST00000394440 SLIT2O94813 1529 aa18.69■□□□□ 0.58
CCT4-201ENST00000394440 HMMRO75330 724 aa18.68■□□□□ 0.58
CCT4-201ENST00000394440 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
CCT4-201ENST00000394440 MAP3K2Q9Y2U5 619 aa18.68■□□□□ 0.58
CCT4-201ENST00000394440 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
CCT4-201ENST00000394440 IBTKQ9P2D0 1353 aaPredicted RBP18.67■□□□□ 0.58
CCT4-201ENST00000394440 ADAMTS2O95450 1211 aa18.67■□□□□ 0.58
CCT4-201ENST00000394440 UBTFL1P0CB47 393 aaPredicted RBP18.67■□□□□ 0.58
CCT4-201ENST00000394440 LRRFIP2Q9Y608 721 aaKnown RBP18.67■□□□□ 0.58
CCT4-201ENST00000394440 MSH5O43196 834 aa18.66■□□□□ 0.58
CCT4-201ENST00000394440 ALDH1L1O75891 902 aa18.66■□□□□ 0.58
CCT4-201ENST00000394440 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
CCT4-201ENST00000394440 ERBB4Q15303 1308 aa18.65■□□□□ 0.58
CCT4-201ENST00000394440 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
CCT4-201ENST00000394440 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
CCT4-201ENST00000394440 PNMA6EA0A0J9YXQ4 647 aa18.64■□□□□ 0.57
CCT4-201ENST00000394440 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.57
CCT4-201ENST00000394440 MEX3CQ5U5Q3 659 aaKnown RBP18.64■□□□□ 0.57
CCT4-201ENST00000394440 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
CCT4-201ENST00000394440 POTEAQ6S8J7 498 aa18.64■□□□□ 0.57
CCT4-201ENST00000394440 THRAP3Q9Y2W1 955 aaKnown RBP18.64■□□□□ 0.57
CCT4-201ENST00000394440 NUP188Q5SRE5 1749 aa18.64■□□□□ 0.57
CCT4-201ENST00000394440 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
CCT4-201ENST00000394440 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
CCT4-201ENST00000394440 SEC24BO95487 1268 aa18.63■□□□□ 0.57
CCT4-201ENST00000394440 MYL6BP14649 208 aa18.63■□□□□ 0.57
CCT4-201ENST00000394440 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
CCT4-201ENST00000394440 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
CCT4-201ENST00000394440 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
CCT4-201ENST00000394440 AFDNP55196 1824 aaKnown RBP18.63■□□□□ 0.57
CCT4-201ENST00000394440 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
CCT4-201ENST00000394440 SSH3Q8TE77 659 aa18.62■□□□□ 0.57
CCT4-201ENST00000394440 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
CCT4-201ENST00000394440 COPS6Q7L5N1 327 aa18.62■□□□□ 0.57
CCT4-201ENST00000394440 IPO9Q96P70 1041 aaKnown RBP18.62■□□□□ 0.57
CCT4-201ENST00000394440 UTYO14607 1347 aa18.61■□□□□ 0.57
CCT4-201ENST00000394440 BCL9O00512 1426 aa18.61■□□□□ 0.57
CCT4-201ENST00000394440 NUTM2BA6NNL0 878 aaPredicted RBP18.61■□□□□ 0.57
CCT4-201ENST00000394440 NUTM2EB1AL46 878 aaPredicted RBP18.61■□□□□ 0.57
CCT4-201ENST00000394440 NUTM2AQ8IVF1 878 aaPredicted RBP18.61■□□□□ 0.57
CCT4-201ENST00000394440 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
CCT4-201ENST00000394440 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
CCT4-201ENST00000394440 EXOC5O00471 708 aa18.61■□□□□ 0.57
CCT4-201ENST00000394440 PLEKHM2Q8IWE5 1019 aa18.61■□□□□ 0.57
CCT4-201ENST00000394440 POLA2Q14181 598 aa18.6■□□□□ 0.57
CCT4-201ENST00000394440 CWF19L2Q2TBE0 894 aaKnown RBP18.6■□□□□ 0.57
CCT4-201ENST00000394440 PIGBQ92521 554 aa18.6■□□□□ 0.57
CCT4-201ENST00000394440 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
CCT4-201ENST00000394440 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
CCT4-201ENST00000394440 NBPF14Q5TI25 921 aa18.6■□□□□ 0.57
CCT4-201ENST00000394440 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
CCT4-201ENST00000394440 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
CCT4-201ENST00000394440 TUBGCP6Q96RT7 1819 aa18.59■□□□□ 0.57
CCT4-201ENST00000394440 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
CCT4-201ENST00000394440 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
CCT4-201ENST00000394440 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
CCT4-201ENST00000394440 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
CCT4-201ENST00000394440 MTX1Q13505 466 aa18.59■□□□□ 0.57
CCT4-201ENST00000394440 METTL22Q9BUU2 404 aaPredicted RBP18.59■□□□□ 0.57
CCT4-201ENST00000394440 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.57
CCT4-201ENST00000394440 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.57
CCT4-201ENST00000394440 EXOC6BQ9Y2D4 811 aa18.58■□□□□ 0.57
CCT4-201ENST00000394440 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.56
CCT4-201ENST00000394440 SMARCA5O60264 1052 aaPredicted RBP18.57■□□□□ 0.56
CCT4-201ENST00000394440 BARGINQ6ZT62 677 aa18.57■□□□□ 0.56
CCT4-201ENST00000394440 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
CCT4-201ENST00000394440 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
CCT4-201ENST00000394440 ATG3Q9NT62 314 aa18.57■□□□□ 0.56
CCT4-201ENST00000394440 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
CCT4-201ENST00000394440 GRM8O00222 908 aa18.57■□□□□ 0.56
CCT4-201ENST00000394440 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
CCT4-201ENST00000394440 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
CCT4-201ENST00000394440 OTUD7AQ8TE49 926 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms