RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 MRC1P22897 1456 aa11.17□□□□□ -0.62
TDP1-202ENST00000393452 ANXA1P04083 346 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 NBPF7P0C2Y1 421 aaPredicted RBP11.16□□□□□ -0.62
TDP1-202ENST00000393452 PHKG2P15735 406 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 DDIT3P35638 169 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 USP26Q9BXU7 913 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 STAP2Q9UGK3 403 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 SPG7Q9UQ90 795 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 HYPKQ9NX55 129 aa11.16□□□□□ -0.62
TDP1-202ENST00000393452 ALDH1L1O75891 902 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 MX1P20591 662 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 PROSER3Q2NL68 480 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 KSR2Q6VAB6 950 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 CHMP5Q9NZZ3 219 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 AOX1Q06278 1338 aa11.15□□□□□ -0.62
TDP1-202ENST00000393452 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 SOCS7O14512 581 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 RAB11FIP3O75154 756 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 MTX1Q13505 466 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
TDP1-202ENST00000393452 C5P01031 1676 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
TDP1-202ENST00000393452 PDIA6Q15084 440 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 CHRNA2Q15822 529 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 MAP3K2Q9Y2U5 619 aa11.14□□□□□ -0.63
TDP1-202ENST00000393452 GSE1Q14687 1217 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 DCAF5Q96JK2 942 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 SOS2Q07890 1332 aaPredicted RBP11.13□□□□□ -0.63
TDP1-202ENST00000393452 PARP4Q9UKK3 1724 aaKnown RBP11.13□□□□□ -0.63
TDP1-202ENST00000393452 CYP27B1O15528 508 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 REC8O95072 547 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 CSB-PGBD3P0DP91 1061 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 RABEP1Q15276 862 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
TDP1-202ENST00000393452 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
TDP1-202ENST00000393452 ERC2O15083 957 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
TDP1-202ENST00000393452 SURF6O75683 361 aaKnown RBP11.12□□□□□ -0.63
TDP1-202ENST00000393452 SLC39A6Q13433 755 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
TDP1-202ENST00000393452 UTYO14607 1347 aa11.12□□□□□ -0.63
TDP1-202ENST00000393452 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
TDP1-202ENST00000393452 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
TDP1-202ENST00000393452 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
TDP1-202ENST00000393452 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
TDP1-202ENST00000393452 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
TDP1-202ENST00000393452 HSP90AB4PQ58FF6 505 aa11.11□□□□□ -0.63
TDP1-202ENST00000393452 ZNF496Q96IT1 587 aaPredicted RBP11.11□□□□□ -0.63
TDP1-202ENST00000393452 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
TDP1-202ENST00000393452 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 AK9Q5TCS8 1911 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 GLI3P10071 1580 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 ABCA3Q99758 1704 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 LRP10Q7Z4F1 713 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
TDP1-202ENST00000393452 WDR17Q8IZU2 1322 aa11.1□□□□□ -0.63
TDP1-202ENST00000393452 CHMLP26374 656 aa11.09□□□□□ -0.63
TDP1-202ENST00000393452 CWF19L2Q2TBE0 894 aaKnown RBP11.09□□□□□ -0.63
TDP1-202ENST00000393452 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
TDP1-202ENST00000393452 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
TDP1-202ENST00000393452 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
TDP1-202ENST00000393452 COL5A2P05997 1499 aaPredicted RBP11.09□□□□□ -0.63
TDP1-202ENST00000393452 GRM8O00222 908 aa11.09□□□□□ -0.63
TDP1-202ENST00000393452 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
TDP1-202ENST00000393452 MCM4P33991 863 aa11.09□□□□□ -0.63
TDP1-202ENST00000393452 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
TDP1-202ENST00000393452 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
TDP1-202ENST00000393452 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
TDP1-202ENST00000393452 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 KAZALD1Q96I82 304 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
TDP1-202ENST00000393452 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 NUTM1Q86Y26 1132 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 IL17RAQ96F46 866 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 FMNL2Q96PY5 1086 aa11.08□□□□□ -0.64
TDP1-202ENST00000393452 TTC5Q8N0Z6 440 aa11.07□□□□□ -0.64
TDP1-202ENST00000393452 USP16Q9Y5T5 823 aa11.07□□□□□ -0.64
TDP1-202ENST00000393452 UBR2Q8IWV8 1755 aa11.07□□□□□ -0.64
TDP1-202ENST00000393452 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
TDP1-202ENST00000393452 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
TDP1-202ENST00000393452 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
TDP1-202ENST00000393452 TRIM6-TRIM34B2RNG4 842 aa11.06□□□□□ -0.64
TDP1-202ENST00000393452 AIMP1Q12904 312 aaKnown RBP11.06□□□□□ -0.64
TDP1-202ENST00000393452 RAB3GAP1Q15042 981 aa11.06□□□□□ -0.64
TDP1-202ENST00000393452 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
TDP1-202ENST00000393452 RILPL2Q969X0 211 aa11.06□□□□□ -0.64
TDP1-202ENST00000393452 METTL22Q9BUU2 404 aaPredicted RBP11.06□□□□□ -0.64
TDP1-202ENST00000393452 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms