RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 SPG7Q9UQ90 795 aa26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 NCOA3Q9Y6Q9 1424 aa26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 CWF19L2Q2TBE0 894 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 SLC52A2Q9HAB3 445 aa26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 CAMTA1Q9Y6Y1 1673 aa26.22■■□□□ 1.79
SPTBN4-203ENST00000392023 KDM6AO15550 1401 aaPredicted RBP26.22■■□□□ 1.79
SPTBN4-203ENST00000392023 MYL6BP14649 208 aa26.22■■□□□ 1.79
SPTBN4-203ENST00000392023 SRGAP3O43295 1099 aa26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 CD2BP2O95400 341 aaKnown RBP26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 IFNL2Q8IZJ0 200 aa26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 COL18A1P39060 1754 aa26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 SURF6O75683 361 aaKnown RBP26.2■■□□□ 1.78
SPTBN4-203ENST00000392023 HSCBQ8IWL3 235 aa26.2■■□□□ 1.78
SPTBN4-203ENST00000392023 PRDM11Q9NQV5 511 aa26.2■■□□□ 1.78
SPTBN4-203ENST00000392023 HEG1Q9ULI3 1381 aa26.19■■□□□ 1.78
SPTBN4-203ENST00000392023 LMTK3Q96Q04 1460 aa26.19■■□□□ 1.78
SPTBN4-203ENST00000392023 ZNF496Q96IT1 587 aaPredicted RBP26.18■■□□□ 1.78
SPTBN4-203ENST00000392023 IBTKQ9P2D0 1353 aaPredicted RBP26.18■■□□□ 1.78
SPTBN4-203ENST00000392023 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
SPTBN4-203ENST00000392023 PXDNLA1KZ92 1463 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 NUTM1Q86Y26 1132 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 SSH3Q8TE77 659 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 PDIA6Q15084 440 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 KSR2Q6VAB6 950 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 FOXD4L1Q9NU39 408 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 C9orf78Q9NZ63 289 aaPredicted RBP26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 MX1P20591 662 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 USP16Q9Y5T5 823 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 CHMP4AQ9BY43 222 aa26.15■■□□□ 1.78
SPTBN4-203ENST00000392023 RILPL2Q969X0 211 aa26.15■■□□□ 1.78
SPTBN4-203ENST00000392023 STRN4Q9NRL3 753 aa26.14■■□□□ 1.78
SPTBN4-203ENST00000392023 OVOS2A0A0G2JMS6 1433 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 TRIM6-TRIM34B2RNG4 842 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 USP26Q9BXU7 913 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 ZMYND15Q9H091 742 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 SIPA1L3O60292 1781 aaPredicted RBP26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 SALL3Q9BXA9 1300 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 OSBPL3Q9H4L5 887 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 DDX21Q9NR30 783 aaKnown RBP eCLIP26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 HYPKQ9NX55 129 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 CRYBG1Q9Y4K1 1723 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 MAP4K4O95819 1239 aaPredicted RBP26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 UNC5CLQ8IV45 518 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 DCAF5Q96JK2 942 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 POLA2Q14181 598 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 TTC5Q8N0Z6 440 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 CABP4P57796 275 aa26.11■■□□□ 1.77
SPTBN4-203ENST00000392023 CASC1Q6TDU7 716 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 COPS6Q7L5N1 327 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 RIC3Q7Z5B4 369 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 RHPN1Q8TCX5 695 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 PA2G4Q9UQ80 394 aaKnown RBP26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 SCN11AQ9UI33 1791 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 HSP90AB1P08238 724 aaKnown RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 XAGE3Q8WTP9 111 aa26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 JARID2Q92833 1246 aaPredicted RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 N4BP2Q86UW6 1770 aaPredicted RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 CPDO75976 1380 aa26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 SOS2Q07890 1332 aaPredicted RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 DDX54Q8TDD1 881 aaKnown RBP26.08■■□□□ 1.77
SPTBN4-203ENST00000392023 SNX21Q969T3 373 aa26.08■■□□□ 1.77
SPTBN4-203ENST00000392023 OS9Q13438 667 aaPredicted RBP26.07■■□□□ 1.76
SPTBN4-203ENST00000392023 ADAMTS7Q9UKP4 1686 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 WDR17Q8IZU2 1322 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 IGKV5-2P06315 115 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 LARP1Q6PKG0 1096 aaKnown RBP26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 VSIG10Q8N0Z9 540 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 DDX58O95786 925 aaKnown RBP26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 SUCLG2Q96I99 432 aa26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 C5P01031 1676 aa26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 ZCRB1Q8TBF4 217 aaKnown RBP26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 ERC2O15083 957 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 ALDH1L1O75891 902 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 SNRPA1P09661 255 aaKnown RBP26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 LINS1Q8NG48 757 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 GRM8O00222 908 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 HSP90AA1P07900 732 aaKnown RBP26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 EVA1CP58658 441 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 KAZALD1Q96I82 304 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 MYD88Q99836 296 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 RAB11FIP3O75154 756 aa26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 FMNL2Q96PY5 1086 aa26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 BICC1Q9H694 974 aaKnown RBP26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 STAP2Q9UGK3 403 aa26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 KIF1BPQ96EK5 621 aa26.02■■□□□ 1.76
SPTBN4-203ENST00000392023 CHMP5Q9NZZ3 219 aa26.02■■□□□ 1.76
SPTBN4-203ENST00000392023 KLHDC4Q8TBB5 520 aa26.01■■□□□ 1.75
SPTBN4-203ENST00000392023 K7ELQ4 463 aaPredicted RBP26■■□□□ 1.75
SPTBN4-203ENST00000392023 PTCD1O75127 700 aaKnown RBP26■■□□□ 1.75
SPTBN4-203ENST00000392023 REC8O95072 547 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26■■□□□ 1.75
SPTBN4-203ENST00000392023 CHMLP26374 656 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 ANKRD13DQ6ZTN6 518 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 IL25Q9H293 177 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 ATP5J2-PTCD1G3V325 749 aa25.99■■□□□ 1.75
SPTBN4-203ENST00000392023 SIL1Q9H173 461 aa25.99■■□□□ 1.75
SPTBN4-203ENST00000392023 ESYT1Q9BSJ8 1104 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms