RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 TEX13AQ9BXU3 409 aaPredicted RBP29■■■□□ 2.23
IGHV3-20-201ENST00000390606 ZBTB1Q9Y2K1 713 aa29■■■□□ 2.23
IGHV3-20-201ENST00000390606 SOS1Q07889 1333 aaPredicted RBP28.99■■■□□ 2.23
IGHV3-20-201ENST00000390606 STARD3NLO95772 234 aa28.99■■■□□ 2.23
IGHV3-20-201ENST00000390606 TRIM35Q9UPQ4 493 aa28.99■■■□□ 2.23
IGHV3-20-201ENST00000390606 KDM3BQ7LBC6 1761 aa28.96■■■□□ 2.23
IGHV3-20-201ENST00000390606 PRAMEF22A3QJZ6 481 aa28.96■■■□□ 2.23
IGHV3-20-201ENST00000390606 RFC4P35249 363 aa28.96■■■□□ 2.23
IGHV3-20-201ENST00000390606 FHDC1Q9C0D6 1143 aaPredicted RBP28.96■■■□□ 2.23
IGHV3-20-201ENST00000390606 C4AP0C0L4 1744 aa28.95■■■□□ 2.23
IGHV3-20-201ENST00000390606 APAF1O14727 1248 aa28.95■■■□□ 2.22
IGHV3-20-201ENST00000390606 SNRPA1P09661 255 aaKnown RBP28.95■■■□□ 2.22
IGHV3-20-201ENST00000390606 USP16Q9Y5T5 823 aa28.95■■■□□ 2.22
IGHV3-20-201ENST00000390606 GYS1P13807 737 aa28.93■■■□□ 2.22
IGHV3-20-201ENST00000390606 EIF4A1P60842 406 aaKnown RBP28.93■■■□□ 2.22
IGHV3-20-201ENST00000390606 SYT17Q9BSW7 474 aa28.93■■■□□ 2.22
IGHV3-20-201ENST00000390606 USP42Q9H9J4 1324 aaKnown RBP28.93■■■□□ 2.22
IGHV3-20-201ENST00000390606 CANXP27824 592 aaKnown RBP28.92■■■□□ 2.22
IGHV3-20-201ENST00000390606 SRP68Q9UHB9 627 aaKnown RBP28.92■■■□□ 2.22
IGHV3-20-201ENST00000390606 COL15A1P39059 1388 aa28.91■■■□□ 2.22
IGHV3-20-201ENST00000390606 EIF5P55010 431 aaKnown RBP28.91■■■□□ 2.22
IGHV3-20-201ENST00000390606 A1BGP04217 495 aa28.9■■■□□ 2.22
IGHV3-20-201ENST00000390606 NLGN1Q8N2Q7 840 aa28.9■■■□□ 2.22
IGHV3-20-201ENST00000390606 BABAM1Q9NWV8 329 aa28.9■■■□□ 2.22
IGHV3-20-201ENST00000390606 TSPYL4Q9UJ04 414 aa28.89■■■□□ 2.22
IGHV3-20-201ENST00000390606 GIGYF1O75420 1035 aaPredicted RBP28.88■■■□□ 2.21
IGHV3-20-201ENST00000390606 CHL1O00533 1208 aa28.86■■■□□ 2.21
IGHV3-20-201ENST00000390606 MMP10P09238 476 aa28.86■■■□□ 2.21
IGHV3-20-201ENST00000390606 IL6STP40189 918 aaPredicted RBP28.86■■■□□ 2.21
IGHV3-20-201ENST00000390606 NARFQ9UHQ1 456 aa28.86■■■□□ 2.21
IGHV3-20-201ENST00000390606 FKBP8Q14318 412 aa28.85■■■□□ 2.21
IGHV3-20-201ENST00000390606 ZPR1O75312 459 aa28.84■■■□□ 2.21
IGHV3-20-201ENST00000390606 USPL1Q5W0Q7 1092 aa28.84■■■□□ 2.21
IGHV3-20-201ENST00000390606 KLHL34Q8N239 644 aa28.84■■■□□ 2.21
IGHV3-20-201ENST00000390606 NBPF26B4DH59 902 aa28.83■■■□□ 2.21
IGHV3-20-201ENST00000390606 PIP4K2AP48426 406 aaPredicted RBP28.83■■■□□ 2.21
IGHV3-20-201ENST00000390606 NBPF10Q6P3W6 841 aaKnown RBP28.83■■■□□ 2.21
IGHV3-20-201ENST00000390606 NBPF15Q8N660 670 aa28.83■■■□□ 2.21
IGHV3-20-201ENST00000390606 BCL2L12Q9HB09 334 aa28.83■■■□□ 2.21
IGHV3-20-201ENST00000390606 A0A087WZG4 1122 aa28.82■■■□□ 2.2
IGHV3-20-201ENST00000390606 LAMB4A4D0S4 1761 aa28.81■■■□□ 2.2
IGHV3-20-201ENST00000390606 NLGN2Q8NFZ4 835 aa28.8■■■□□ 2.2
IGHV3-20-201ENST00000390606 CFAP44Q96MT7 982 aa28.8■■■□□ 2.2
IGHV3-20-201ENST00000390606 ZNF330Q9Y3S2 320 aaPredicted RBP28.8■■■□□ 2.2
IGHV3-20-201ENST00000390606 CD2APQ9Y5K6 639 aa28.8■■■□□ 2.2
IGHV3-20-201ENST00000390606 LAS1LQ9Y4W2 734 aaKnown RBP28.79■■■□□ 2.2
IGHV3-20-201ENST00000390606 SENP3-EIF4A1A0A087X0R7 540 aa28.78■■■□□ 2.2
IGHV3-20-201ENST00000390606 ZNF853P0CG23 659 aa28.78■■■□□ 2.2
IGHV3-20-201ENST00000390606 TM4SF1P30408 202 aa28.78■■■□□ 2.2
IGHV3-20-201ENST00000390606 DDR1Q08345 913 aa28.78■■■□□ 2.2
IGHV3-20-201ENST00000390606 TBC1D2BQ9UPU7 963 aa28.78■■■□□ 2.2
IGHV3-20-201ENST00000390606 CCDC27Q2M243 656 aa28.77■■■□□ 2.2
IGHV3-20-201ENST00000390606 NCBP3Q53F19 620 aaKnown RBP28.76■■■□□ 2.19
IGHV3-20-201ENST00000390606 FAM9BQ8IZU0 186 aa28.76■■■□□ 2.19
IGHV3-20-201ENST00000390606 CAMTA2O94983 1202 aa28.75■■■□□ 2.19
IGHV3-20-201ENST00000390606 KRT24Q2M2I5 525 aa28.75■■■□□ 2.19
IGHV3-20-201ENST00000390606 IFT57Q9NWB7 429 aa28.75■■■□□ 2.19
IGHV3-20-201ENST00000390606 PARP3Q9Y6F1 533 aa28.75■■■□□ 2.19
IGHV3-20-201ENST00000390606 CALD1Q05682 793 aaKnown RBP28.74■■■□□ 2.19
IGHV3-20-201ENST00000390606 NFIXQ14938 502 aa28.74■■■□□ 2.19
IGHV3-20-201ENST00000390606 DZIP3Q86Y13 1208 aaKnown RBP28.74■■■□□ 2.19
IGHV3-20-201ENST00000390606 MBIPQ9NS73 344 aa28.74■■■□□ 2.19
IGHV3-20-201ENST00000390606 SCN7AQ01118 1682 aa28.74■■■□□ 2.19
IGHV3-20-201ENST00000390606 POLRMTO00411 1230 aaKnown RBP28.73■■■□□ 2.19
IGHV3-20-201ENST00000390606 NPM2Q86SE8 214 aaKnown RBP28.73■■■□□ 2.19
IGHV3-20-201ENST00000390606 C10orf71Q711Q0 1435 aa28.72■■■□□ 2.19
IGHV3-20-201ENST00000390606 WWC1Q8IX03 1113 aa28.72■■■□□ 2.19
IGHV3-20-201ENST00000390606 GNAI1P63096 354 aa28.71■■■□□ 2.19
IGHV3-20-201ENST00000390606 ERBB4Q15303 1308 aa28.7■■■□□ 2.19
IGHV3-20-201ENST00000390606 EIF2S2P20042 333 aaKnown RBP28.69■■■□□ 2.18
IGHV3-20-201ENST00000390606 TBC1D9BQ66K14 1250 aa28.69■■■□□ 2.18
IGHV3-20-201ENST00000390606 BCORQ6W2J9 1755 aa28.68■■■□□ 2.18
IGHV3-20-201ENST00000390606 PDIA6Q15084 440 aa28.68■■■□□ 2.18
IGHV3-20-201ENST00000390606 LRP10Q7Z4F1 713 aa28.68■■■□□ 2.18
IGHV3-20-201ENST00000390606 KIF13BQ9NQT8 1826 aa28.68■■■□□ 2.18
IGHV3-20-201ENST00000390606 CCER2I3L3R5 266 aa28.67■■■□□ 2.18
IGHV3-20-201ENST00000390606 MYL6BP14649 208 aa28.66■■■□□ 2.18
IGHV3-20-201ENST00000390606 BICDL1Q6ZP65 573 aa28.66■■■□□ 2.18
IGHV3-20-201ENST00000390606 DCAF8L1A6NGE4 600 aa28.65■■■□□ 2.18
IGHV3-20-201ENST00000390606 RGL2O15211 777 aa28.65■■■□□ 2.18
IGHV3-20-201ENST00000390606 HOXB7P09629 217 aa28.65■■■□□ 2.18
IGHV3-20-201ENST00000390606 CLEC4GQ6UXB4 293 aa28.65■■■□□ 2.18
IGHV3-20-201ENST00000390606 NGEFQ8N5V2 710 aa28.65■■■□□ 2.18
IGHV3-20-201ENST00000390606 NRXN2Q9P2S2 1712 aa28.64■■■□□ 2.18
IGHV3-20-201ENST00000390606 SERPINB2P05120 415 aa28.64■■■□□ 2.18
IGHV3-20-201ENST00000390606 PROSER3Q2NL68 480 aa28.64■■■□□ 2.18
IGHV3-20-201ENST00000390606 DUSP27Q5VZP5 1158 aa28.64■■■□□ 2.18
IGHV3-20-201ENST00000390606 PXDNLA1KZ92 1463 aa28.64■■■□□ 2.17
IGHV3-20-201ENST00000390606 TGFB2P61812 414 aa28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 DIEXFQ68CQ4 756 aaKnown RBP28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 TTLL7Q6ZT98 887 aa28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 NECTIN2Q92692 538 aa28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 SALL2Q9Y467 1007 aaPredicted RBP28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 IL16Q14005 1332 aa28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 KIAA1551Q9HCM1 1747 aa28.63■■■□□ 2.17
IGHV3-20-201ENST00000390606 ANXA1P04083 346 aa28.62■■■□□ 2.17
IGHV3-20-201ENST00000390606 AFDNP55196 1824 aaKnown RBP28.62■■■□□ 2.17
IGHV3-20-201ENST00000390606 HLFQ16534 295 aa28.61■■■□□ 2.17
IGHV3-20-201ENST00000390606 ERVV-1B6SEH8 477 aa28.6■■■□□ 2.17
IGHV3-20-201ENST00000390606 YBX3P16989 372 aaKnown RBP eCLIP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms