RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 CDV3Q9UKY7 258 aaKnown RBP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 MIA2Q96PC5 1412 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 ARHGAP5Q13017 1502 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 ARHGEF5Q12774 1597 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 MSTNO14793 375 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 IGHA1P01876 353 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 ADD1P35611 737 aaKnown RBP3.61□□□□□ -1.83
TRAV41-201ENST00000390468 SRSF11Q05519 484 aaKnown RBP3.61□□□□□ -1.83
TRAV41-201ENST00000390468 FAM50AQ14320 339 aaKnown RBP3.61□□□□□ -1.83
TRAV41-201ENST00000390468 GAS6Q14393 721 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 TUSC1Q2TAM9 212 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 TAF7LQ5H9L4 462 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 PODNQ7Z5L7 613 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 EPS8L1Q8TE68 723 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 RSPH6AQ9H0K4 717 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 SUPT16HQ9Y5B9 1047 aaKnown RBP3.61□□□□□ -1.83
TRAV41-201ENST00000390468 MAP3K4Q9Y6R4 1608 aa3.61□□□□□ -1.83
TRAV41-201ENST00000390468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.61□□□□□ -1.83
TRAV41-201ENST00000390468 ABCC10Q5T3U5 1492 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 WDR7Q9Y4E6 1490 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 PLEKHD1A6NEE1 506 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 ITGAEP38570 1179 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 PTGIRP43119 386 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 FOXK2Q01167 660 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 PLA2G4EQ3MJ16 856 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 FBXO31Q5XUX0 539 aaPredicted RBP3.6□□□□□ -1.83
TRAV41-201ENST00000390468 FOXR1Q6PIV2 292 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 PROCA1Q8NCQ7 364 aaPredicted RBP3.6□□□□□ -1.83
TRAV41-201ENST00000390468 GTPBP3Q969Y2 492 aaKnown RBP3.6□□□□□ -1.83
TRAV41-201ENST00000390468 ZNF837Q96EG3 531 aaPredicted RBP3.6□□□□□ -1.83
TRAV41-201ENST00000390468 CCDC136Q96JN2 1154 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 OCSTAMPQ9BR26 566 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 ABCC1P33527 1531 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 ARAP3Q8WWN8 1544 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 SYCP2Q9BX26 1530 aa3.6□□□□□ -1.83
TRAV41-201ENST00000390468 GPATCH8Q9UKJ3 1502 aaKnown RBP3.6□□□□□ -1.83
TRAV41-201ENST00000390468 PLXNC1O60486 1568 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 MAST1Q9Y2H9 1570 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 PPRC1Q5VV67 1664 aaKnown RBP3.59□□□□□ -1.83
TRAV41-201ENST00000390468 RICTORQ6R327 1708 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 PHF20L1A8MW92 1017 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 LILRA1O75019 489 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 SLC27A3Q5K4L6 730 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 XP32Q5T750 250 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 DCAF5Q96JK2 942 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 SPOCK3Q9BQ16 436 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 HMX1Q9NP08 348 aaPredicted RBP3.59□□□□□ -1.83
TRAV41-201ENST00000390468 MBIPQ9NS73 344 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 FANCIQ9NVI1 1328 aa3.59□□□□□ -1.83
TRAV41-201ENST00000390468 DAPK1P53355 1430 aa3.59□□□□□ -1.84
TRAV41-201ENST00000390468 MAPKBP1O60336 1514 aa3.59□□□□□ -1.84
TRAV41-201ENST00000390468 KDM6BO15054 1643 aa3.59□□□□□ -1.84
TRAV41-201ENST00000390468 CEP152O94986 1710 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 KIF1BO60333 1816 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 ATP5J2-PTCD1G3V325 749 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 BCRP11274 1271 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 POU4F2Q12837 409 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 DBN1Q16643 649 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 BEND7Q8N7W2 519 aaPredicted RBP3.58□□□□□ -1.84
TRAV41-201ENST00000390468 KDF1Q8NAX2 398 aaPredicted RBP3.58□□□□□ -1.84
TRAV41-201ENST00000390468 PNMA1Q8ND90 353 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 NLRP3Q96P20 1036 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 TRERF1Q96PN7 1200 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 RRAGCQ9HB90 399 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 PCDHB9Q9Y5E1 797 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 ZC3H4Q9UPT8 1303 aaKnown RBP3.58□□□□□ -1.84
TRAV41-201ENST00000390468 SETD5Q9C0A6 1442 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 CCDC141Q6ZP82 1450 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 PLEKHH2Q8IVE3 1493 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 SHANK2Q9UPX8 1470 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 DIP2BQ9P265 1576 aa3.58□□□□□ -1.84
TRAV41-201ENST00000390468 ADAM23O75077 832 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 ADGRL2O95490 1459 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 POLR1AO95602 1720 aaPredicted RBP3.57□□□□□ -1.84
TRAV41-201ENST00000390468 GLI2P10070 1586 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 MX2P20592 715 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 FGD1P98174 961 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 SPHKAPQ2M3C7 1700 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 ASXL2Q76L83 1435 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 AKNAQ7Z591 1439 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 TRIM22Q8IYM9 498 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 ACDQ96AP0 544 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 GPAMQ9HCL2 828 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 EIF2AK4Q9P2K8 1649 aaKnown RBP3.57□□□□□ -1.84
TRAV41-201ENST00000390468 HECW2Q9P2P5 1572 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 CFDP1Q9UEE9 299 aaPredicted RBP3.57□□□□□ -1.84
TRAV41-201ENST00000390468 INO80Q9ULG1 1556 aaPredicted RBP3.57□□□□□ -1.84
TRAV41-201ENST00000390468 KIDINS220Q9ULH0 1771 aa3.57□□□□□ -1.84
TRAV41-201ENST00000390468 UNC13BO14795 1591 aa3.56□□□□□ -1.84
TRAV41-201ENST00000390468 ZFYVE16Q7Z3T8 1539 aa3.56□□□□□ -1.84
TRAV41-201ENST00000390468 HFM1A2PYH4 1435 aa3.56□□□□□ -1.84
TRAV41-201ENST00000390468 RAB3GAP2Q9H2M9 1393 aa3.56□□□□□ -1.84
TRAV41-201ENST00000390468 A0A1W2PRU2 124 aa3.56□□□□□ -1.84
TRAV41-201ENST00000390468 GIGYF1O75420 1035 aaPredicted RBP3.56□□□□□ -1.84
TRAV41-201ENST00000390468 USP17L8P0C7I0 530 aa3.56□□□□□ -1.84
TRAV41-201ENST00000390468 RNF144AP50876 292 aaPredicted RBP3.56□□□□□ -1.84
TRAV41-201ENST00000390468 ESF1Q9H501 851 aaKnown RBP3.56□□□□□ -1.84
TRAV41-201ENST00000390468 GPBP1L1Q9HC44 474 aaPredicted RBP3.56□□□□□ -1.84
TRAV41-201ENST00000390468 ZNF777Q9ULD5 760 aaPredicted RBP3.56□□□□□ -1.84
TRAV41-201ENST00000390468 RBM19Q9Y4C8 960 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms