RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 BTG4Q9NY30 223 aa12.15□□□□□ -0.47
PKP4-201ENST00000389757 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.47
PKP4-201ENST00000389757 ZFYVE16Q7Z3T8 1539 aa12.14□□□□□ -0.47
PKP4-201ENST00000389757 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
PKP4-201ENST00000389757 LDHCP07864 332 aa12.14□□□□□ -0.47
PKP4-201ENST00000389757 IP6K1Q92551 441 aa12.14□□□□□ -0.47
PKP4-201ENST00000389757 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
PKP4-201ENST00000389757 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
PKP4-201ENST00000389757 COPS6Q7L5N1 327 aa12.14□□□□□ -0.47
PKP4-201ENST00000389757 CT47A1Q5JQC4 288 aaPredicted RBP12.13□□□□□ -0.47
PKP4-201ENST00000389757 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
PKP4-201ENST00000389757 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
PKP4-201ENST00000389757 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
PKP4-201ENST00000389757 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
PKP4-201ENST00000389757 LETM1O95202 739 aaPredicted RBP12.13□□□□□ -0.47
PKP4-201ENST00000389757 HOXC9P31274 260 aa12.13□□□□□ -0.47
PKP4-201ENST00000389757 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
PKP4-201ENST00000389757 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
PKP4-201ENST00000389757 TESK2Q96S53 571 aa12.13□□□□□ -0.47
PKP4-201ENST00000389757 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 CASTP20810 708 aaKnown RBP12.12□□□□□ -0.47
PKP4-201ENST00000389757 ZNF76P36508 570 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
PKP4-201ENST00000389757 ECHDC1Q9NTX5 307 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
PKP4-201ENST00000389757 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 NLRP3Q96P20 1036 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 ORAI2Q96SN7 254 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 ME1P48163 572 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 HOMER1Q86YM7 354 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 EYA1Q99502 592 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 MAPKBP1O60336 1514 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
PKP4-201ENST00000389757 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
PKP4-201ENST00000389757 PIBF1Q8WXW3 757 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 RNF41Q9H4P4 317 aaPredicted RBP12.12□□□□□ -0.47
PKP4-201ENST00000389757 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
PKP4-201ENST00000389757 KRT85P78386 507 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 NBPF14Q5TI25 921 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 ADGRL2O95490 1459 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 BACH2Q9BYV9 841 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 MAGEC2Q9UBF1 373 aaPredicted RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
PKP4-201ENST00000389757 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 FAM13BQ9NYF5 915 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 POLR3AO14802 1390 aaPredicted RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 TMEM2Q9UHN6 1383 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
PKP4-201ENST00000389757 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 BAG3O95817 575 aa12.11□□□□□ -0.47
PKP4-201ENST00000389757 ODF2Q5BJF6 829 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 ZHX3Q9H4I2 956 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 MAP3K5Q99683 1374 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 ZNF213O14771 459 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
PKP4-201ENST00000389757 ALDH1L1O75891 902 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 UQCRFS1P1P0C7P4 283 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
PKP4-201ENST00000389757 GOLIM4O00461 696 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 CTCFLQ8NI51 663 aaPredicted RBP12.1□□□□□ -0.47
PKP4-201ENST00000389757 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
PKP4-201ENST00000389757 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
PKP4-201ENST00000389757 FILIP1LQ4L180 1135 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 PZPP20742 1482 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
PKP4-201ENST00000389757 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
PKP4-201ENST00000389757 TARBP1Q13395 1621 aaKnown RBP12.09□□□□□ -0.47
PKP4-201ENST00000389757 HMGB1P09429 215 aaKnown RBP12.09□□□□□ -0.47
PKP4-201ENST00000389757 POLD1P28340 1107 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 STIM1Q13586 685 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 CAVIN1Q6NZI2 390 aaKnown RBP12.09□□□□□ -0.47
PKP4-201ENST00000389757 PDILTQ8N807 584 aa12.09□□□□□ -0.47
PKP4-201ENST00000389757 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 SAMD9Q5K651 1589 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 NFKBIBQ15653 356 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 CCDC96Q2M329 555 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 GRM8O00222 908 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
PKP4-201ENST00000389757 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
PKP4-201ENST00000389757 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms