RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 PLA2G4DQ86XP0 818 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 GPATCH11Q8N954 259 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 SMARCE1Q969G3 411 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 POLKQ9UBT6 870 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 FAM173BQ6P4H8 233 aa22.45■■□□□ 1.18
SMARCD1-201ENST00000381513 MEIS3Q99687 375 aa22.45■■□□□ 1.18
SMARCD1-201ENST00000381513 CABP2Q9NPB3 220 aa22.45■■□□□ 1.18
SMARCD1-201ENST00000381513 HMMRO75330 724 aa22.45■■□□□ 1.18
SMARCD1-201ENST00000381513 GOLGA6L1Q8N7Z2 621 aa22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 USP16Q9Y5T5 823 aa22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 CHMLP26374 656 aa22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 GJB2P29033 226 aa22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 NOP2P46087 812 aaKnown RBP22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 GEMIN8Q9NWZ8 242 aaKnown RBP22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 CCDC69A6NI79 296 aa22.44■■□□□ 1.18
SMARCD1-201ENST00000381513 CLTCL1P53675 1640 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 AK2P54819 239 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 YY1AP1Q9H869 796 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 UNC13BO14795 1591 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 ICE2Q659A1 982 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 LRRN4CLQ8ND94 238 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 UBXN4Q92575 508 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 ATP10BO94823 1461 aa22.43■■□□□ 1.18
SMARCD1-201ENST00000381513 H2AFXP16104 143 aaPredicted RBP22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 NYAP1Q6ZVC0 841 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 SYCP2Q9BX26 1530 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 PTPRCP08575 1304 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 ADGRB2O60241 1585 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 SOX12O15370 315 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 SNW1Q13573 536 aaKnown RBP22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 LIMCH1Q9UPQ0 1083 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 CPA1P15085 419 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 KRT85P78386 507 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 SLC4A10Q6U841 1118 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 TTC6Q86TZ1 520 aa22.42■■□□□ 1.18
SMARCD1-201ENST00000381513 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
SMARCD1-201ENST00000381513 SEC31AO94979 1220 aaKnown RBP22.41■■□□□ 1.18
SMARCD1-201ENST00000381513 LMAN1P49257 510 aa22.41■■□□□ 1.18
SMARCD1-201ENST00000381513 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
SMARCD1-201ENST00000381513 IQGAP3Q86VI3 1631 aa22.41■■□□□ 1.18
SMARCD1-201ENST00000381513 MUM1L1Q5H9M0 696 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 CCAR2Q8N163 923 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 NFATC2IPQ8NCF5 419 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 BICD2Q8TD16 824 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 CCDC34Q96HJ3 373 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 BECN2A8MW95 431 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 CTR9Q6PD62 1173 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 HOMER1Q86YM7 354 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 PHACTR3Q96KR7 559 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 DRC1Q96MC2 740 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 TFIP11Q9UBB9 837 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 MTMR6Q9Y217 621 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 OAS2P29728 719 aaKnown RBP22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 ERBB3P21860 1342 aa22.4■■□□□ 1.18
SMARCD1-201ENST00000381513 NEMFO60524 1076 aa22.39■■□□□ 1.18
SMARCD1-201ENST00000381513 MNS1Q8NEH6 495 aa22.39■■□□□ 1.18
SMARCD1-201ENST00000381513 TDRD7Q8NHU6 1098 aaKnown RBP22.39■■□□□ 1.18
SMARCD1-201ENST00000381513 CASTP20810 708 aaKnown RBP22.39■■□□□ 1.17
SMARCD1-201ENST00000381513 FCHSD2O94868 740 aa22.38■■□□□ 1.17
SMARCD1-201ENST00000381513 MAP4K4O95819 1239 aaPredicted RBP22.38■■□□□ 1.17
SMARCD1-201ENST00000381513 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
SMARCD1-201ENST00000381513 AK7Q96M32 723 aa22.38■■□□□ 1.17
SMARCD1-201ENST00000381513 RRP15Q9Y3B9 282 aaKnown RBP22.38■■□□□ 1.17
SMARCD1-201ENST00000381513 SAMD9LQ8IVG5 1584 aa22.37■■□□□ 1.17
SMARCD1-201ENST00000381513 RUFY3Q7L099 469 aa22.37■■□□□ 1.17
SMARCD1-201ENST00000381513 FBXW7Q969H0 707 aa22.37■■□□□ 1.17
SMARCD1-201ENST00000381513 KIF2AO00139 706 aaPredicted RBP22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 FBLN1P23142 703 aa22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 MYCBPQ99417 103 aaPredicted RBP22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 LARGE1O95461 756 aa22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 UNC5CLQ8IV45 518 aa22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
SMARCD1-201ENST00000381513 EVC2Q86UK5 1308 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 MYCNP04198 464 aaPredicted RBP22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 NOM1Q5C9Z4 860 aaKnown RBP22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 LARP1BQ659C4 914 aaKnown RBP22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 SLC26A8Q96RN1 970 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 GNL2Q13823 731 aaKnown RBP22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 SPATA32Q96LK8 384 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 OSBPL3Q9H4L5 887 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 IL25Q9H293 177 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 JRKLQ9Y4A0 524 aa22.35■■□□□ 1.17
SMARCD1-201ENST00000381513 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.35■■□□□ 1.171e-8■□□□□ 10.2
SMARCD1-201ENST00000381513 ARHGAP5Q13017 1502 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 HSPA4P34932 840 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 SRLQ86TD4 932 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 KLHL34Q8N239 644 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 NSD2O96028 1365 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 MSH6P52701 1360 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 SBNO2Q9Y2G9 1366 aa22.34■■□□□ 1.17
SMARCD1-201ENST00000381513 ATP10DQ9P241 1426 aa22.33■■□□□ 1.17
SMARCD1-201ENST00000381513 NECAB1Q8N987 351 aa22.33■■□□□ 1.17
SMARCD1-201ENST00000381513 DDX19AQ9NUU7 478 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms