RNA–Protein interactions for RNA: ENST00000381124.9

H2AFV-205, Transcript of H2A histone family member V, humanhuman

TSL 3 BASIC

Gene H2AFV, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-205ENST00000381124 MAPK8IP3Q9UPT6 1336 aa35.68■■■■□ 3.3
H2AFV-205ENST00000381124 ZNF316A6NFI3 1004 aaPredicted RBP35.68■■■■□ 3.3
H2AFV-205ENST00000381124 YBX3P16989 372 aaKnown RBP eCLIP35.68■■■■□ 3.3
H2AFV-205ENST00000381124 FKBP8Q14318 412 aa35.68■■■■□ 3.3
H2AFV-205ENST00000381124 PLEKHF1Q96S99 279 aa35.68■■■■□ 3.3
H2AFV-205ENST00000381124 TEX13AQ9BXU3 409 aaPredicted RBP35.68■■■■□ 3.3
H2AFV-205ENST00000381124 COL15A1P39059 1388 aa35.66■■■■□ 3.3
H2AFV-205ENST00000381124 WWC3Q9ULE0 1092 aa35.66■■■■□ 3.3
H2AFV-205ENST00000381124 USPL1Q5W0Q7 1092 aa35.65■■■■□ 3.3
H2AFV-205ENST00000381124 GRIN3BO60391 1043 aa35.64■■■■□ 3.3
H2AFV-205ENST00000381124 PRKRIP1Q9H875 184 aaPredicted RBP35.64■■■■□ 3.3
H2AFV-205ENST00000381124 NFE2L2Q16236 605 aa35.63■■■■□ 3.29
H2AFV-205ENST00000381124 NARFQ9UHQ1 456 aa35.61■■■■□ 3.29
H2AFV-205ENST00000381124 ZNF330Q9Y3S2 320 aaPredicted RBP35.61■■■■□ 3.29
H2AFV-205ENST00000381124 TAF7Q15545 349 aaPredicted RBP35.6■■■■□ 3.29
H2AFV-205ENST00000381124 DDR1Q08345 913 aa35.58■■■■□ 3.29
H2AFV-205ENST00000381124 C10orf71Q711Q0 1435 aa35.57■■■■□ 3.29
H2AFV-205ENST00000381124 EIF5P55010 431 aaKnown RBP35.57■■■■□ 3.28
H2AFV-205ENST00000381124 A0A087WZG4 1122 aa35.56■■■■□ 3.28
H2AFV-205ENST00000381124 A1BGP04217 495 aa35.56■■■■□ 3.28
H2AFV-205ENST00000381124 MIS18AQ9NYP9 233 aa35.56■■■■□ 3.28
H2AFV-205ENST00000381124 TGFB2P61812 414 aa35.55■■■■□ 3.28
H2AFV-205ENST00000381124 NPM2Q86SE8 214 aaKnown RBP35.55■■■■□ 3.28
H2AFV-205ENST00000381124 SNRPA1P09661 255 aaKnown RBP35.54■■■■□ 3.28
H2AFV-205ENST00000381124 THUMPD2Q9BTF0 503 aaKnown RBP35.54■■■■□ 3.28
H2AFV-205ENST00000381124 USP16Q9Y5T5 823 aa35.54■■■■□ 3.28
H2AFV-205ENST00000381124 CHD4Q14839 1912 aa35.53■■■■□ 3.28
H2AFV-205ENST00000381124 A0A0G2JLW4 131 aa35.53■■■■□ 3.28
H2AFV-205ENST00000381124 PRAMEF22A3QJZ6 481 aa35.53■■■■□ 3.28
H2AFV-205ENST00000381124 TM4SF1P30408 202 aa35.53■■■■□ 3.28
H2AFV-205ENST00000381124 IL6STP40189 918 aaPredicted RBP35.53■■■■□ 3.28
H2AFV-205ENST00000381124 PXDNLA1KZ92 1463 aa35.53■■■■□ 3.28
H2AFV-205ENST00000381124 UTRNP46939 3433 aa35.53■■■■□ 3.28
H2AFV-205ENST00000381124 POLRMTO00411 1230 aaKnown RBP35.52■■■■□ 3.28
H2AFV-205ENST00000381124 WDR43Q15061 677 aaKnown RBP eCLIP35.52■■■■□ 3.28
H2AFV-205ENST00000381124 BCL2L12Q9HB09 334 aa35.52■■■■□ 3.28
H2AFV-205ENST00000381124 NFIXQ14938 502 aa35.51■■■■□ 3.28
H2AFV-205ENST00000381124 PNISRQ8TF01 805 aaKnown RBP35.51■■■■□ 3.28
H2AFV-205ENST00000381124 DLG5Q8TDM6 1919 aa35.51■■■■□ 3.27
H2AFV-205ENST00000381124 TBC1D2BQ9UPU7 963 aa35.5■■■■□ 3.27
H2AFV-205ENST00000381124 DPEP1P16444 411 aa35.49■■■■□ 3.27
H2AFV-205ENST00000381124 RIPK4P57078 832 aa35.49■■■■□ 3.27
H2AFV-205ENST00000381124 ZNF784Q8NCA9 323 aaPredicted RBP35.49■■■■□ 3.27
H2AFV-205ENST00000381124 PIP4K2AP48426 406 aaPredicted RBP35.48■■■■□ 3.27
H2AFV-205ENST00000381124 CCDC146Q8IYE0 955 aa35.48■■■■□ 3.27
H2AFV-205ENST00000381124 KIF13BQ9NQT8 1826 aa35.48■■■■□ 3.27
H2AFV-205ENST00000381124 BICDL1Q6ZP65 573 aa35.47■■■■□ 3.27
H2AFV-205ENST00000381124 BCS1LQ9Y276 419 aa35.45■■■■□ 3.27
H2AFV-205ENST00000381124 TMPOP42166 694 aaKnown RBP35.44■■■■□ 3.26
H2AFV-205ENST00000381124 SERPINB2P05120 415 aa35.43■■■■□ 3.26
H2AFV-205ENST00000381124 RRP7AQ9Y3A4 280 aaKnown RBP35.43■■■■□ 3.26
H2AFV-205ENST00000381124 N4BP2Q86UW6 1770 aaPredicted RBP35.43■■■■□ 3.26
H2AFV-205ENST00000381124 LMOD3Q0VAK6 560 aa35.42■■■■□ 3.26
H2AFV-205ENST00000381124 KIAA1551Q9HCM1 1747 aa35.41■■■■□ 3.26
H2AFV-205ENST00000381124 NEUROD2Q15784 382 aa35.41■■■■□ 3.26
H2AFV-205ENST00000381124 DZIP3Q86Y13 1208 aaKnown RBP35.41■■■■□ 3.26
H2AFV-205ENST00000381124 ADAMTS8Q9UP79 889 aa35.41■■■■□ 3.26
H2AFV-205ENST00000381124 GOLGB1Q14789 3259 aaKnown RBP35.41■■■■□ 3.26
H2AFV-205ENST00000381124 TBC1D9BQ66K14 1250 aa35.4■■■■□ 3.26
H2AFV-205ENST00000381124 RUNDC1Q96C34 613 aa35.4■■■■□ 3.26
H2AFV-205ENST00000381124 CAMTA2O94983 1202 aa35.38■■■■□ 3.25
H2AFV-205ENST00000381124 CHRNA5P30532 468 aa35.38■■■■□ 3.25
H2AFV-205ENST00000381124 EIF4A1P60842 406 aaKnown RBP35.38■■■■□ 3.25
H2AFV-205ENST00000381124 TSPYL4Q9UJ04 414 aa35.38■■■■□ 3.25
H2AFV-205ENST00000381124 PIM2Q9P1W9 311 aa35.37■■■■□ 3.25
H2AFV-205ENST00000381124 NBPF26B4DH59 902 aa35.36■■■■□ 3.25
H2AFV-205ENST00000381124 KCNA3P22001 575 aa35.36■■■■□ 3.25
H2AFV-205ENST00000381124 NBPF10Q6P3W6 841 aaKnown RBP35.36■■■■□ 3.25
H2AFV-205ENST00000381124 NBPF15Q8N660 670 aa35.36■■■■□ 3.25
H2AFV-205ENST00000381124 GIGYF1O75420 1035 aaPredicted RBP35.35■■■■□ 3.25
H2AFV-205ENST00000381124 CCDC184Q52MB2 194 aa35.35■■■■□ 3.25
H2AFV-205ENST00000381124 KDM3BQ7LBC6 1761 aa35.35■■■■□ 3.25
H2AFV-205ENST00000381124 SCN7AQ01118 1682 aa35.34■■■■□ 3.25
H2AFV-205ENST00000381124 DALRD3Q5D0E6 543 aaKnown RBP35.32■■■■□ 3.24
H2AFV-205ENST00000381124 SETDB2Q96T68 719 aa35.32■■■■□ 3.24
H2AFV-205ENST00000381124 ARHGAP27Q6ZUM4 889 aa35.31■■■■□ 3.24
H2AFV-205ENST00000381124 AFDNP55196 1824 aaKnown RBP35.31■■■■□ 3.24
H2AFV-205ENST00000381124 CARMIL3Q8ND23 1372 aa35.3■■■■□ 3.24
H2AFV-205ENST00000381124 NPHP1O15259 732 aa35.3■■■■□ 3.24
H2AFV-205ENST00000381124 ANP32CO43423 234 aa35.3■■■■□ 3.24
H2AFV-205ENST00000381124 ZNF652Q9Y2D9 606 aa35.3■■■■□ 3.24
H2AFV-205ENST00000381124 NGEFQ8N5V2 710 aa35.29■■■■□ 3.24
H2AFV-205ENST00000381124 NRXN2Q9P2S2 1712 aa35.28■■■■□ 3.24
H2AFV-205ENST00000381124 LAMB4A4D0S4 1761 aa35.27■■■■□ 3.24
H2AFV-205ENST00000381124 C2CD5Q86YS7 1000 aa35.26■■■■□ 3.24
H2AFV-205ENST00000381124 CCDC24Q8N4L8 307 aa35.26■■■■□ 3.24
H2AFV-205ENST00000381124 BABAM1Q9NWV8 329 aa35.26■■■■□ 3.24
H2AFV-205ENST00000381124 PRR5LQ6MZQ0 368 aa35.25■■■■□ 3.23
H2AFV-205ENST00000381124 CLEC4GQ6UXB4 293 aa35.25■■■■□ 3.23
H2AFV-205ENST00000381124 TRIM35Q9UPQ4 493 aa35.25■■■■□ 3.23
H2AFV-205ENST00000381124 LAS1LQ9Y4W2 734 aaKnown RBP35.25■■■■□ 3.23
H2AFV-205ENST00000381124 ATP10DQ9P241 1426 aa35.24■■■■□ 3.23
H2AFV-205ENST00000381124 CNBD1Q8NA66 436 aa35.24■■■■□ 3.23
H2AFV-205ENST00000381124 BRCA1P38398 1863 aaKnown RBP35.24■■■■□ 3.23
H2AFV-205ENST00000381124 BCORQ6W2J9 1755 aa35.23■■■■□ 3.23
H2AFV-205ENST00000381124 H0YIN7 160 aa35.23■■■■□ 3.23
H2AFV-205ENST00000381124 MYL6BP14649 208 aa35.23■■■■□ 3.23
H2AFV-205ENST00000381124 EIF2S2P20042 333 aaKnown RBP35.2■■■■□ 3.23
H2AFV-205ENST00000381124 PDE6BP35913 854 aa35.2■■■■□ 3.23
H2AFV-205ENST00000381124 ST5P78524 1137 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms