RNA–Protein interactions for RNA: ENST00000380751.9

SERF1B-202, Transcript of small EDRK-rich factor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1B, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-202ENST00000380751 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
SERF1B-202ENST00000380751 NFIXQ14938 502 aa23.57■■□□□ 1.36
SERF1B-202ENST00000380751 VSIG10Q8N0Z9 540 aa23.56■■□□□ 1.36
SERF1B-202ENST00000380751 BCL2L12Q9HB09 334 aa23.56■■□□□ 1.36
SERF1B-202ENST00000380751 ADAMTS7Q9UKP4 1686 aa23.55■■□□□ 1.36
SERF1B-202ENST00000380751 CANXP27824 592 aaKnown RBP23.55■■□□□ 1.36
SERF1B-202ENST00000380751 RNF181Q9P0P0 153 aa23.55■■□□□ 1.36
SERF1B-202ENST00000380751 BRCA1P38398 1863 aaKnown RBP23.55■■□□□ 1.36
SERF1B-202ENST00000380751 APLP1P51693 650 aa23.54■■□□□ 1.36
SERF1B-202ENST00000380751 MRC1P22897 1456 aa23.54■■□□□ 1.36
SERF1B-202ENST00000380751 KCPQ6ZWJ8 1503 aa23.54■■□□□ 1.36
SERF1B-202ENST00000380751 COL15A1P39059 1388 aa23.53■■□□□ 1.36
SERF1B-202ENST00000380751 SERPINB2P05120 415 aa23.53■■□□□ 1.36
SERF1B-202ENST00000380751 U2SURPO15042 1029 aaKnown RBP23.52■■□□□ 1.36
SERF1B-202ENST00000380751 IL17REQ8NFR9 667 aa23.52■■□□□ 1.36
SERF1B-202ENST00000380751 TTC5Q8N0Z6 440 aa23.51■■□□□ 1.35
SERF1B-202ENST00000380751 STARD3NLO95772 234 aa23.5■■□□□ 1.35
SERF1B-202ENST00000380751 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
SERF1B-202ENST00000380751 DNAJC5GQ8N7S2 189 aa23.5■■□□□ 1.35
SERF1B-202ENST00000380751 RRAGCQ9HB90 399 aa23.5■■□□□ 1.35
SERF1B-202ENST00000380751 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
SERF1B-202ENST00000380751 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
SERF1B-202ENST00000380751 BICDL1Q6ZP65 573 aa23.49■■□□□ 1.35
SERF1B-202ENST00000380751 RBM46Q8TBY0 533 aaKnown RBP23.49■■□□□ 1.35
SERF1B-202ENST00000380751 ZNF496Q96IT1 587 aaPredicted RBP23.49■■□□□ 1.35
SERF1B-202ENST00000380751 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
SERF1B-202ENST00000380751 GNAT3A8MTJ3 354 aa23.48■■□□□ 1.35
SERF1B-202ENST00000380751 RASSF7Q02833 373 aa23.48■■□□□ 1.35
SERF1B-202ENST00000380751 TEFQ10587 303 aa23.48■■□□□ 1.35
SERF1B-202ENST00000380751 ZNF790Q6PG37 636 aa23.47■■□□□ 1.35
SERF1B-202ENST00000380751 GAS2L2Q8NHY3 880 aa23.47■■□□□ 1.35
SERF1B-202ENST00000380751 C2CD5Q86YS7 1000 aa23.46■■□□□ 1.35
SERF1B-202ENST00000380751 TTLL6Q8N841 843 aa23.46■■□□□ 1.35
SERF1B-202ENST00000380751 A0A087WZG4 1122 aa23.45■■□□□ 1.34
SERF1B-202ENST00000380751 COL3A1P02461 1466 aaPredicted RBP23.44■■□□□ 1.34
SERF1B-202ENST00000380751 NPC1L1Q9UHC9 1359 aa23.44■■□□□ 1.34
SERF1B-202ENST00000380751 HEG1Q9ULI3 1381 aa23.44■■□□□ 1.34
SERF1B-202ENST00000380751 H0YIN7 160 aa23.44■■□□□ 1.34
SERF1B-202ENST00000380751 PRELPP51888 382 aa23.44■■□□□ 1.34
SERF1B-202ENST00000380751 TBC1D9BQ66K14 1250 aa23.44■■□□□ 1.34
SERF1B-202ENST00000380751 TEX13AQ9BXU3 409 aaPredicted RBP23.44■■□□□ 1.34
SERF1B-202ENST00000380751 TBC1D2BQ9UPU7 963 aa23.44■■□□□ 1.34
SERF1B-202ENST00000380751 ZNF330Q9Y3S2 320 aaPredicted RBP23.44■■□□□ 1.34
SERF1B-202ENST00000380751 HTRA3P83110 453 aa23.43■■□□□ 1.34
SERF1B-202ENST00000380751 AFDNP55196 1824 aaKnown RBP23.43■■□□□ 1.34
SERF1B-202ENST00000380751 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
SERF1B-202ENST00000380751 CARMIL3Q8ND23 1372 aa23.42■■□□□ 1.34
SERF1B-202ENST00000380751 LMNB1P20700 586 aa23.42■■□□□ 1.34
SERF1B-202ENST00000380751 FSTL1Q12841 308 aa23.42■■□□□ 1.34
SERF1B-202ENST00000380751 PHACTR3Q96KR7 559 aa23.42■■□□□ 1.34
SERF1B-202ENST00000380751 KCNQ3O43525 872 aa23.41■■□□□ 1.34
SERF1B-202ENST00000380751 A1BGP04217 495 aa23.41■■□□□ 1.34
SERF1B-202ENST00000380751 CCDC24Q8N4L8 307 aa23.41■■□□□ 1.34
SERF1B-202ENST00000380751 NRXN2Q9P2S2 1712 aa23.4■■□□□ 1.34
SERF1B-202ENST00000380751 IL6STP40189 918 aaPredicted RBP23.4■■□□□ 1.34
SERF1B-202ENST00000380751 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
SERF1B-202ENST00000380751 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
SERF1B-202ENST00000380751 PRKAR2BP31323 418 aa23.39■■□□□ 1.33
SERF1B-202ENST00000380751 ZNF622Q969S3 477 aaKnown RBP eCLIP23.39■■□□□ 1.33
SERF1B-202ENST00000380751 UBR2Q8IWV8 1755 aa23.39■■□□□ 1.33
SERF1B-202ENST00000380751 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
SERF1B-202ENST00000380751 BRIP1Q9BX63 1249 aa23.38■■□□□ 1.33
SERF1B-202ENST00000380751 SBF1O95248 1867 aa23.38■■□□□ 1.33
SERF1B-202ENST00000380751 ZC3H4Q9UPT8 1303 aaKnown RBP23.37■■□□□ 1.33
SERF1B-202ENST00000380751 GLTPD2A6NH11 291 aa23.37■■□□□ 1.33
SERF1B-202ENST00000380751 NFKBIEO00221 500 aa23.37■■□□□ 1.33
SERF1B-202ENST00000380751 RSPH6AQ9H0K4 717 aa23.37■■□□□ 1.33
SERF1B-202ENST00000380751 ZNF219Q9P2Y4 722 aaPredicted RBP23.37■■□□□ 1.33
SERF1B-202ENST00000380751 CEMIPQ8WUJ3 1361 aa23.37■■□□□ 1.33
SERF1B-202ENST00000380751 PDE6BP35913 854 aa23.36■■□□□ 1.33
SERF1B-202ENST00000380751 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
SERF1B-202ENST00000380751 CFAP53Q96M91 514 aa23.36■■□□□ 1.33
SERF1B-202ENST00000380751 USP16Q9Y5T5 823 aa23.36■■□□□ 1.33
SERF1B-202ENST00000380751 C21orf2O43822 256 aa23.35■■□□□ 1.33
SERF1B-202ENST00000380751 VEGFAP15692 232 aaPredicted RBP23.35■■□□□ 1.33
SERF1B-202ENST00000380751 SETDB2Q96T68 719 aa23.35■■□□□ 1.33
SERF1B-202ENST00000380751 PDZRN3Q9UPQ7 1066 aa23.35■■□□□ 1.33
SERF1B-202ENST00000380751 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
SERF1B-202ENST00000380751 SMC1BQ8NDV3 1235 aa23.34■■□□□ 1.33
SERF1B-202ENST00000380751 KLRG1Q96E93 195 aa23.34■■□□□ 1.33
SERF1B-202ENST00000380751 PIP4K2AP48426 406 aaPredicted RBP23.33■■□□□ 1.33
SERF1B-202ENST00000380751 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
SERF1B-202ENST00000380751 PRAMEF22A3QJZ6 481 aa23.32■■□□□ 1.32
SERF1B-202ENST00000380751 DZIP3Q86Y13 1208 aaKnown RBP23.32■■□□□ 1.32
SERF1B-202ENST00000380751 NPHP1O15259 732 aa23.31■■□□□ 1.32
SERF1B-202ENST00000380751 U2AF1L5P0DN76 240 aaPredicted RBP23.31■■□□□ 1.32
SERF1B-202ENST00000380751 U2AF1Q01081 240 aaKnown RBP eCLIP23.31■■□□□ 1.32
SERF1B-202ENST00000380751 MCM10Q7L590 875 aa23.31■■□□□ 1.32
SERF1B-202ENST00000380751 WDR90Q96KV7 1748 aa23.3■■□□□ 1.32
SERF1B-202ENST00000380751 DLEC1Q9Y238 1755 aa23.3■■□□□ 1.32
SERF1B-202ENST00000380751 PPP2R1AP30153 589 aa23.3■■□□□ 1.32
SERF1B-202ENST00000380751 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
SERF1B-202ENST00000380751 RTF1Q92541 710 aaKnown RBP23.3■■□□□ 1.32
SERF1B-202ENST00000380751 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
SERF1B-202ENST00000380751 POTECB2RU33 542 aa23.29■■□□□ 1.32
SERF1B-202ENST00000380751 DPY19L2Q6NUT2 758 aa23.29■■□□□ 1.32
SERF1B-202ENST00000380751 JMYQ8N9B5 988 aa23.29■■□□□ 1.32
SERF1B-202ENST00000380751 TNRC6CQ9HCJ0 1690 aaKnown RBP23.28■■□□□ 1.32
SERF1B-202ENST00000380751 SNRPA1P09661 255 aaKnown RBP23.28■■□□□ 1.32
SERF1B-202ENST00000380751 ST5P78524 1137 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms