RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ARFGAP3Q9NP61 516 aa19.8■□□□□ 0.76
COL4A3BP-203ENST00000380494 PTPRCP08575 1304 aa19.8■□□□□ 0.76
COL4A3BP-203ENST00000380494 SMARCA5O60264 1052 aaPredicted RBP19.8■□□□□ 0.76
COL4A3BP-203ENST00000380494 IKQ13123 557 aaPredicted RBP19.8■□□□□ 0.76
COL4A3BP-203ENST00000380494 TTC22Q5TAA0 569 aa19.8■□□□□ 0.76
COL4A3BP-203ENST00000380494 SEPT11Q9NVA2 429 aaKnown RBP19.8■□□□□ 0.76
COL4A3BP-203ENST00000380494 CNNM3Q8NE01 707 aa19.79■□□□□ 0.76
COL4A3BP-203ENST00000380494 ZSCAN22P10073 491 aaPredicted RBP19.79■□□□□ 0.76
COL4A3BP-203ENST00000380494 CETN2P41208 172 aa19.79■□□□□ 0.76
COL4A3BP-203ENST00000380494 IRX3P78415 501 aaPredicted RBP19.79■□□□□ 0.76
COL4A3BP-203ENST00000380494 FAM200AQ8TCP9 573 aa19.79■□□□□ 0.76
COL4A3BP-203ENST00000380494 ZSCAN16Q9H4T2 348 aaPredicted RBP19.79■□□□□ 0.76
COL4A3BP-203ENST00000380494 PYM1Q9BRP8 204 aaKnown RBP19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 CCDC196A0A1B0GTZ2 297 aa19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 SLU7O95391 586 aaKnown RBP19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 ZHX3Q9H4I2 956 aa19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 IGHDP01880 384 aa19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 PPP1R12BO60237 982 aaPredicted RBP19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 KANK3Q6NY19 840 aa19.78■□□□□ 0.76
COL4A3BP-203ENST00000380494 HSF2BPO75031 334 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 FKBP4Q02790 459 aaKnown RBP eCLIP19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 NUCB1Q02818 461 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 TRIM27P14373 513 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 C8orf34Q49A92 452 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 HCLS1P14317 486 aaPredicted RBP19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 CCDC178Q5BJE1 867 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 CCDC12Q8WUD4 166 aaPredicted RBP19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 CABP1Q9NZU7 370 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
COL4A3BP-203ENST00000380494 CACNA2D4Q7Z3S7 1137 aa19.77■□□□□ 0.75
COL4A3BP-203ENST00000380494 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.75
COL4A3BP-203ENST00000380494 PANK2Q9BZ23 570 aa19.77■□□□□ 0.75
COL4A3BP-203ENST00000380494 TDO2P48775 406 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 GNG11P61952 73 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 DHX37Q8IY37 1157 aaKnown RBP19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 RAB3GAP1Q15042 981 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 TAOK3Q9H2K8 898 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 IPO4Q8TEX9 1081 aaKnown RBP19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 TERF1P54274 439 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 IL16Q14005 1332 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 CCDC113Q9H0I3 377 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 CEP126Q9P2H0 1117 aa19.76■□□□□ 0.75
COL4A3BP-203ENST00000380494 CEP112Q8N8E3 955 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 SMC5Q8IY18 1101 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 ANAPC15P60006 121 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 EVI5LQ96CN4 794 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 HMG20BQ9P0W2 317 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 SKILP12757 684 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 HSPA4P34932 840 aa19.75■□□□□ 0.75
COL4A3BP-203ENST00000380494 GDPD2Q9HCC8 539 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 NSD2O96028 1365 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 DESP17661 470 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 POTEJP0CG39 1038 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 FAM114A1Q8IWE2 563 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 STK11IPQ8N1F8 1099 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 TMX3Q96JJ7 454 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.752e-10■■■■□ 21.8
COL4A3BP-203ENST00000380494 KLHL10Q6JEL2 608 aa19.74■□□□□ 0.75
COL4A3BP-203ENST00000380494 PTPN23Q9H3S7 1636 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 TATP17735 454 aaPredicted RBP19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 CTAGE15A4D2H0 777 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 CTAGE8P0CG41 777 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 CTAGE6Q86UF2 777 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 CTAGE4Q8IX94 777 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 BCCIPQ9P287 314 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 OPA1O60313 960 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 WWC2Q6AWC2 1192 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 AKAP2Q9Y2D5 859 aa19.73■□□□□ 0.75
COL4A3BP-203ENST00000380494 TTC31Q49AM3 519 aaPredicted RBP19.72■□□□□ 0.75
COL4A3BP-203ENST00000380494 KIF20AO95235 890 aa19.72■□□□□ 0.75
COL4A3BP-203ENST00000380494 GOPCQ9HD26 462 aa19.72■□□□□ 0.75
COL4A3BP-203ENST00000380494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.72■□□□□ 0.751e-6■■■□□ 15.8
COL4A3BP-203ENST00000380494 V9GYY5 206 aaPredicted RBP19.72■□□□□ 0.75
COL4A3BP-203ENST00000380494 GNAT3A8MTJ3 354 aa19.72■□□□□ 0.75
COL4A3BP-203ENST00000380494 GIMAP6Q6P9H5 292 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 GOLGA1Q92805 767 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 AIDAQ96BJ3 306 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 CTAGE1Q96RT6 745 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 CCDC186Q7Z3E2 898 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 ANO6Q4KMQ2 910 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 ZNF530Q6P9A1 599 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 RSPH14Q9UHP6 348 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 BTBD11A6QL63 1104 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 TMEM132AQ24JP5 1023 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 GOLIM4O00461 696 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 USP48Q86UV5 1035 aa19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 ZNF830Q96NB3 372 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-203ENST00000380494 TUBBP07437 444 aa19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 IBSPP21815 317 aaPredicted RBP19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 SSRP1Q08945 709 aaKnown RBP19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 TMX1Q9H3N1 280 aa19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 NUTM2GQ5VZR2 741 aa19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 SSBP05455 408 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 CPLX3Q8WVH0 158 aa19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 NSRP1Q9H0G5 558 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms