RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 MRC1P22897 1456 aa18.71■□□□□ 0.59
SNX2-201ENST00000379516 KSR2Q6VAB6 950 aa18.7■□□□□ 0.58
SNX2-201ENST00000379516 TBC1D32Q96NH3 1257 aa18.7■□□□□ 0.58
SNX2-201ENST00000379516 N4BP2Q86UW6 1770 aaPredicted RBP18.7■□□□□ 0.58
SNX2-201ENST00000379516 PDIA6Q15084 440 aa18.7■□□□□ 0.58
SNX2-201ENST00000379516 PARP4Q9UKK3 1724 aaKnown RBP18.69■□□□□ 0.58
SNX2-201ENST00000379516 SLC4A3P48751 1232 aa18.69■□□□□ 0.58
SNX2-201ENST00000379516 AIMP1Q12904 312 aaKnown RBP18.69■□□□□ 0.58
SNX2-201ENST00000379516 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
SNX2-201ENST00000379516 USP35Q9P2H5 1018 aa18.69■□□□□ 0.58
SNX2-201ENST00000379516 EXOC6BQ9Y2D4 811 aa18.69■□□□□ 0.58
SNX2-201ENST00000379516 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
SNX2-201ENST00000379516 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
SNX2-201ENST00000379516 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
SNX2-201ENST00000379516 DDX58O95786 925 aaKnown RBP18.68■□□□□ 0.58
SNX2-201ENST00000379516 NBPF7P0C2Y1 421 aaPredicted RBP18.68■□□□□ 0.58
SNX2-201ENST00000379516 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
SNX2-201ENST00000379516 MYL6BP14649 208 aa18.67■□□□□ 0.58
SNX2-201ENST00000379516 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
SNX2-201ENST00000379516 ROBO1Q9Y6N7 1651 aa18.67■□□□□ 0.58
SNX2-201ENST00000379516 GSPT1P15170 499 aaKnown RBP18.66■□□□□ 0.58
SNX2-201ENST00000379516 C22orf23Q9BZE7 217 aa18.66■□□□□ 0.58
SNX2-201ENST00000379516 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
SNX2-201ENST00000379516 ALDH1L1O75891 902 aa18.65■□□□□ 0.58
SNX2-201ENST00000379516 NKX1-1Q15270 411 aaPredicted RBP18.65■□□□□ 0.58
SNX2-201ENST00000379516 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
SNX2-201ENST00000379516 PPP1R42Q7Z4L9 355 aa18.65■□□□□ 0.58
SNX2-201ENST00000379516 LRRCC1Q9C099 1032 aa18.65■□□□□ 0.58
SNX2-201ENST00000379516 C5P01031 1676 aa18.64■□□□□ 0.58
SNX2-201ENST00000379516 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
SNX2-201ENST00000379516 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
SNX2-201ENST00000379516 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
SNX2-201ENST00000379516 CWF19L2Q2TBE0 894 aaKnown RBP18.64■□□□□ 0.57
SNX2-201ENST00000379516 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
SNX2-201ENST00000379516 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
SNX2-201ENST00000379516 COPS6Q7L5N1 327 aa18.62■□□□□ 0.57
SNX2-201ENST00000379516 LINS1Q8NG48 757 aa18.62■□□□□ 0.57
SNX2-201ENST00000379516 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
SNX2-201ENST00000379516 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
SNX2-201ENST00000379516 IBTKQ9P2D0 1353 aaPredicted RBP18.62■□□□□ 0.57
SNX2-201ENST00000379516 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
SNX2-201ENST00000379516 CDC45O75419 566 aa18.62■□□□□ 0.57
SNX2-201ENST00000379516 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
SNX2-201ENST00000379516 POLA2Q14181 598 aa18.61■□□□□ 0.57
SNX2-201ENST00000379516 BECN1Q14457 450 aa18.61■□□□□ 0.57
SNX2-201ENST00000379516 SURF6O75683 361 aaKnown RBP18.59■□□□□ 0.57
SNX2-201ENST00000379516 PDE1AP54750 535 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 NEXNQ0ZGT2 675 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 LRP10Q7Z4F1 713 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 SDSP20132 328 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 ANKRD13DQ6ZTN6 518 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 OSBPL3Q9H4L5 887 aa18.59■□□□□ 0.57
SNX2-201ENST00000379516 GRM8O00222 908 aa18.58■□□□□ 0.57
SNX2-201ENST00000379516 RAB11FIP3O75154 756 aa18.58■□□□□ 0.57
SNX2-201ENST00000379516 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
SNX2-201ENST00000379516 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
SNX2-201ENST00000379516 METTL22Q9BUU2 404 aaPredicted RBP18.58■□□□□ 0.56
SNX2-201ENST00000379516 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
SNX2-201ENST00000379516 MYD88Q99836 296 aa18.57■□□□□ 0.56
SNX2-201ENST00000379516 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
SNX2-201ENST00000379516 NBR1Q14596 966 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 TMOD3Q9NYL9 352 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 SALL3Q9BXA9 1300 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 MX1P20591 662 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
SNX2-201ENST00000379516 MTX1Q13505 466 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 IL1RAPL2Q9NP60 686 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 COL22A1Q8NFW1 1626 aaPredicted RBP18.56■□□□□ 0.56
SNX2-201ENST00000379516 UTYO14607 1347 aa18.56■□□□□ 0.56
SNX2-201ENST00000379516 NEURL1BA8MQ27 555 aa18.55■□□□□ 0.56
SNX2-201ENST00000379516 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
SNX2-201ENST00000379516 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
SNX2-201ENST00000379516 GLI3P10071 1580 aa18.55■□□□□ 0.56
SNX2-201ENST00000379516 ADAMTS2O95450 1211 aa18.55■□□□□ 0.56
SNX2-201ENST00000379516 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
SNX2-201ENST00000379516 HSP90AB4PQ58FF6 505 aa18.54■□□□□ 0.56
SNX2-201ENST00000379516 KIF1BPQ96EK5 621 aa18.54■□□□□ 0.56
SNX2-201ENST00000379516 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
SNX2-201ENST00000379516 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
SNX2-201ENST00000379516 COL16A1Q07092 1604 aaPredicted RBP18.53■□□□□ 0.56
SNX2-201ENST00000379516 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
SNX2-201ENST00000379516 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 GCKRQ14397 625 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 NBPF14Q5TI25 921 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
SNX2-201ENST00000379516 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 TBC1D2Q9BYX2 928 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
SNX2-201ENST00000379516 A1BGP04217 495 aa18.52■□□□□ 0.56
SNX2-201ENST00000379516 OS9Q13438 667 aaPredicted RBP18.52■□□□□ 0.56
SNX2-201ENST00000379516 KAZALD1Q96I82 304 aa18.52■□□□□ 0.56
SNX2-201ENST00000379516 BICC1Q9H694 974 aaKnown RBP18.52■□□□□ 0.56
SNX2-201ENST00000379516 STAP2Q9UGK3 403 aa18.52■□□□□ 0.56
SNX2-201ENST00000379516 EXOC5O00471 708 aa18.52■□□□□ 0.55
SNX2-201ENST00000379516 PLBD2Q8NHP8 589 aa18.52■□□□□ 0.55
SNX2-201ENST00000379516 LAMB4A4D0S4 1761 aa18.52■□□□□ 0.55
SNX2-201ENST00000379516 TNS2Q63HR2 1409 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms