RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 TEX13AQ9BXU3 409 aaPredicted RBP32.75■■■□□ 2.83
TNFRSF4-201ENST00000379236 ZBTB1Q9Y2K1 713 aa32.75■■■□□ 2.83
TNFRSF4-201ENST00000379236 MCM10Q7L590 875 aa32.74■■■□□ 2.83
TNFRSF4-201ENST00000379236 PNNQ9H307 717 aaKnown RBP32.74■■■□□ 2.83
TNFRSF4-201ENST00000379236 CANXP27824 592 aaKnown RBP32.73■■■□□ 2.83
TNFRSF4-201ENST00000379236 WWC3Q9ULE0 1092 aa32.73■■■□□ 2.83
TNFRSF4-201ENST00000379236 C10orf71Q711Q0 1435 aa32.72■■■□□ 2.83
TNFRSF4-201ENST00000379236 HTATSF1O43719 755 aaKnown RBP32.72■■■□□ 2.83
TNFRSF4-201ENST00000379236 FKBP8Q14318 412 aa32.72■■■□□ 2.83
TNFRSF4-201ENST00000379236 USPL1Q5W0Q7 1092 aa32.72■■■□□ 2.83
TNFRSF4-201ENST00000379236 MAPK8IP3Q9UPT6 1336 aa32.71■■■□□ 2.83
TNFRSF4-201ENST00000379236 KIAA1551Q9HCM1 1747 aa32.71■■■□□ 2.83
TNFRSF4-201ENST00000379236 TGFB2P61812 414 aa32.69■■■□□ 2.82
TNFRSF4-201ENST00000379236 NPM2Q86SE8 214 aaKnown RBP32.69■■■□□ 2.82
TNFRSF4-201ENST00000379236 ZNF784Q8NCA9 323 aaPredicted RBP32.69■■■□□ 2.82
TNFRSF4-201ENST00000379236 NARFQ9UHQ1 456 aa32.69■■■□□ 2.82
TNFRSF4-201ENST00000379236 PXDNLA1KZ92 1463 aa32.68■■■□□ 2.82
TNFRSF4-201ENST00000379236 DCTN1Q14203 1278 aa32.68■■■□□ 2.82
TNFRSF4-201ENST00000379236 A0A087WZG4 1122 aa32.67■■■□□ 2.82
TNFRSF4-201ENST00000379236 ZNF330Q9Y3S2 320 aaPredicted RBP32.67■■■□□ 2.82
TNFRSF4-201ENST00000379236 AFDNP55196 1824 aaKnown RBP32.65■■■□□ 2.82
TNFRSF4-201ENST00000379236 KCNQ3O43525 872 aa32.64■■■□□ 2.82
TNFRSF4-201ENST00000379236 MYBBP1AQ9BQG0 1328 aaKnown RBP32.64■■■□□ 2.82
TNFRSF4-201ENST00000379236 BRCA1P38398 1863 aaKnown RBP32.63■■■□□ 2.81
TNFRSF4-201ENST00000379236 DDR1Q08345 913 aa32.63■■■□□ 2.81
TNFRSF4-201ENST00000379236 SCN7AQ01118 1682 aa32.62■■■□□ 2.81
TNFRSF4-201ENST00000379236 A0A0G2JLW4 131 aa32.62■■■□□ 2.81
TNFRSF4-201ENST00000379236 NFE2L2Q16236 605 aa32.61■■■□□ 2.81
TNFRSF4-201ENST00000379236 PLEKHF1Q96S99 279 aa32.61■■■□□ 2.81
TNFRSF4-201ENST00000379236 POLRMTO00411 1230 aaKnown RBP32.6■■■□□ 2.81
TNFRSF4-201ENST00000379236 TM4SF1P30408 202 aa32.6■■■□□ 2.81
TNFRSF4-201ENST00000379236 EIF5P55010 431 aaKnown RBP32.6■■■□□ 2.81
TNFRSF4-201ENST00000379236 TAF7Q15545 349 aaPredicted RBP32.6■■■□□ 2.81
TNFRSF4-201ENST00000379236 IL6STP40189 918 aaPredicted RBP32.59■■■□□ 2.81
TNFRSF4-201ENST00000379236 BCS1LQ9Y276 419 aa32.59■■■□□ 2.81
TNFRSF4-201ENST00000379236 LAMB4A4D0S4 1761 aa32.58■■■□□ 2.81
TNFRSF4-201ENST00000379236 KDM3BQ7LBC6 1761 aa32.58■■■□□ 2.81
TNFRSF4-201ENST00000379236 SNRPA1P09661 255 aaKnown RBP32.58■■■□□ 2.81
TNFRSF4-201ENST00000379236 DPEP1P16444 411 aa32.58■■■□□ 2.81
TNFRSF4-201ENST00000379236 ZEB1P37275 1124 aaPredicted RBP32.58■■■□□ 2.81
TNFRSF4-201ENST00000379236 A1BGP04217 495 aa32.57■■■□□ 2.8
TNFRSF4-201ENST00000379236 NFIXQ14938 502 aa32.57■■■□□ 2.8
TNFRSF4-201ENST00000379236 PNISRQ8TF01 805 aaKnown RBP32.57■■■□□ 2.8
TNFRSF4-201ENST00000379236 ARFGEF1Q9Y6D6 1849 aa32.56■■■□□ 2.8
TNFRSF4-201ENST00000379236 NRXN2Q9P2S2 1712 aa32.56■■■□□ 2.8
TNFRSF4-201ENST00000379236 BCORQ6W2J9 1755 aa32.55■■■□□ 2.8
TNFRSF4-201ENST00000379236 BICDL1Q6ZP65 573 aa32.54■■■□□ 2.8
TNFRSF4-201ENST00000379236 TBC1D2BQ9UPU7 963 aa32.54■■■□□ 2.8
TNFRSF4-201ENST00000379236 BCL2L12Q9HB09 334 aa32.53■■■□□ 2.8
TNFRSF4-201ENST00000379236 USP16Q9Y5T5 823 aa32.53■■■□□ 2.8
TNFRSF4-201ENST00000379236 SERPINB2P05120 415 aa32.52■■■□□ 2.8
TNFRSF4-201ENST00000379236 WDR43Q15061 677 aaKnown RBP eCLIP32.52■■■□□ 2.8
TNFRSF4-201ENST00000379236 MIS18AQ9NYP9 233 aa32.52■■■□□ 2.8
TNFRSF4-201ENST00000379236 PIM2Q9P1W9 311 aa32.52■■■□□ 2.8
TNFRSF4-201ENST00000379236 PRAMEF22A3QJZ6 481 aa32.5■■■□□ 2.79
TNFRSF4-201ENST00000379236 DZIP3Q86Y13 1208 aaKnown RBP32.49■■■□□ 2.79
TNFRSF4-201ENST00000379236 PIP4K2AP48426 406 aaPredicted RBP32.48■■■□□ 2.79
TNFRSF4-201ENST00000379236 RIPK4P57078 832 aa32.48■■■□□ 2.79
TNFRSF4-201ENST00000379236 THUMPD2Q9BTF0 503 aaKnown RBP32.48■■■□□ 2.79
TNFRSF4-201ENST00000379236 DLEC1Q9Y238 1755 aa32.47■■■□□ 2.79
TNFRSF4-201ENST00000379236 LMOD3Q0VAK6 560 aa32.47■■■□□ 2.79
TNFRSF4-201ENST00000379236 ATP10DQ9P241 1426 aa32.46■■■□□ 2.79
TNFRSF4-201ENST00000379236 NPHP1O15259 732 aa32.46■■■□□ 2.79
TNFRSF4-201ENST00000379236 CHRNA5P30532 468 aa32.46■■■□□ 2.79
TNFRSF4-201ENST00000379236 DALRD3Q5D0E6 543 aaKnown RBP32.46■■■□□ 2.79
TNFRSF4-201ENST00000379236 TBC1D9BQ66K14 1250 aa32.46■■■□□ 2.79
TNFRSF4-201ENST00000379236 ARHGAP27Q6ZUM4 889 aa32.46■■■□□ 2.79
TNFRSF4-201ENST00000379236 KCNA3P22001 575 aa32.45■■■□□ 2.79
TNFRSF4-201ENST00000379236 CARMIL3Q8ND23 1372 aa32.45■■■□□ 2.78
TNFRSF4-201ENST00000379236 PRKRIP1Q9H875 184 aaPredicted RBP32.44■■■□□ 2.78
TNFRSF4-201ENST00000379236 GIGYF1O75420 1035 aaPredicted RBP32.43■■■□□ 2.78
TNFRSF4-201ENST00000379236 CAMTA2O94983 1202 aa32.43■■■□□ 2.78
TNFRSF4-201ENST00000379236 CCDC146Q8IYE0 955 aa32.43■■■□□ 2.78
TNFRSF4-201ENST00000379236 ZNF652Q9Y2D9 606 aa32.43■■■□□ 2.78
TNFRSF4-201ENST00000379236 SETDB2Q96T68 719 aa32.42■■■□□ 2.78
TNFRSF4-201ENST00000379236 TMPOP42166 694 aaKnown RBP32.41■■■□□ 2.78
TNFRSF4-201ENST00000379236 ANKRD31Q8N7Z5 1873 aa32.41■■■□□ 2.78
TNFRSF4-201ENST00000379236 TSPYL4Q9UJ04 414 aa32.4■■■□□ 2.78
TNFRSF4-201ENST00000379236 ADCY9O60503 1353 aa32.4■■■□□ 2.78
TNFRSF4-201ENST00000379236 EIF4A1P60842 406 aaKnown RBP32.39■■■□□ 2.78
TNFRSF4-201ENST00000379236 NEUROD2Q15784 382 aa32.39■■■□□ 2.78
TNFRSF4-201ENST00000379236 RUNDC1Q96C34 613 aa32.39■■■□□ 2.78
TNFRSF4-201ENST00000379236 H0YIN7 160 aa32.38■■■□□ 2.77
TNFRSF4-201ENST00000379236 C2CD5Q86YS7 1000 aa32.38■■■□□ 2.77
TNFRSF4-201ENST00000379236 ZNF526Q8TF50 670 aaPredicted RBP32.38■■■□□ 2.77
TNFRSF4-201ENST00000379236 GPBP1L1Q9HC44 474 aaPredicted RBP32.38■■■□□ 2.77
TNFRSF4-201ENST00000379236 RRP7AQ9Y3A4 280 aaKnown RBP32.38■■■□□ 2.77
TNFRSF4-201ENST00000379236 NBPF26B4DH59 902 aa32.36■■■□□ 2.77
TNFRSF4-201ENST00000379236 NBPF10Q6P3W6 841 aaKnown RBP32.36■■■□□ 2.77
TNFRSF4-201ENST00000379236 CLEC4GQ6UXB4 293 aa32.36■■■□□ 2.77
TNFRSF4-201ENST00000379236 NBPF15Q8N660 670 aa32.36■■■□□ 2.77
TNFRSF4-201ENST00000379236 CNBD1Q8NA66 436 aa32.36■■■□□ 2.77
TNFRSF4-201ENST00000379236 ST5P78524 1137 aa32.35■■■□□ 2.77
TNFRSF4-201ENST00000379236 CACNA1SQ13698 1873 aa32.35■■■□□ 2.77
TNFRSF4-201ENST00000379236 PDE6BP35913 854 aa32.34■■■□□ 2.77
TNFRSF4-201ENST00000379236 PRR5LQ6MZQ0 368 aa32.34■■■□□ 2.77
TNFRSF4-201ENST00000379236 PDZRN3Q9UPQ7 1066 aa32.34■■■□□ 2.77
TNFRSF4-201ENST00000379236 NGEFQ8N5V2 710 aa32.33■■■□□ 2.77
TNFRSF4-201ENST00000379236 ADAMTS8Q9UP79 889 aa32.33■■■□□ 2.77
TNFRSF4-201ENST00000379236 NUP98P52948 1817 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms