RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PIM2Q9P1W9 311 aa18.34■□□□□ 0.53
PRPF18-202ENST00000378572 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
PRPF18-202ENST00000378572 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
PRPF18-202ENST00000378572 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
PRPF18-202ENST00000378572 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
PRPF18-202ENST00000378572 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
PRPF18-202ENST00000378572 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
PRPF18-202ENST00000378572 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
PRPF18-202ENST00000378572 BRCA1P38398 1863 aaKnown RBP18.32■□□□□ 0.52
PRPF18-202ENST00000378572 POLRMTO00411 1230 aaKnown RBP18.32■□□□□ 0.52
PRPF18-202ENST00000378572 CHRNA5P30532 468 aa18.32■□□□□ 0.52
PRPF18-202ENST00000378572 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
PRPF18-202ENST00000378572 GNAT3A8MTJ3 354 aa18.3■□□□□ 0.52
PRPF18-202ENST00000378572 STARD3NLO95772 234 aa18.3■□□□□ 0.52
PRPF18-202ENST00000378572 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
PRPF18-202ENST00000378572 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
PRPF18-202ENST00000378572 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
PRPF18-202ENST00000378572 CCER2I3L3R5 266 aa18.29■□□□□ 0.52
PRPF18-202ENST00000378572 ARFGEF1Q9Y6D6 1849 aa18.29■□□□□ 0.52
PRPF18-202ENST00000378572 HSPA6P17066 643 aa18.29■□□□□ 0.52
PRPF18-202ENST00000378572 RALBP1Q15311 655 aa18.29■□□□□ 0.52
PRPF18-202ENST00000378572 C9orf131Q5VYM1 1079 aa18.29■□□□□ 0.52
PRPF18-202ENST00000378572 KCNA3P22001 575 aa18.28■□□□□ 0.52
PRPF18-202ENST00000378572 NFIXQ14938 502 aa18.28■□□□□ 0.52
PRPF18-202ENST00000378572 BICDL1Q6ZP65 573 aa18.28■□□□□ 0.52
PRPF18-202ENST00000378572 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
PRPF18-202ENST00000378572 KIF3CO14782 793 aa18.27■□□□□ 0.52
PRPF18-202ENST00000378572 TM4SF1P30408 202 aa18.27■□□□□ 0.52
PRPF18-202ENST00000378572 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
PRPF18-202ENST00000378572 RNF181Q9P0P0 153 aa18.26■□□□□ 0.51
PRPF18-202ENST00000378572 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
PRPF18-202ENST00000378572 A0A087WZG4 1122 aa18.26■□□□□ 0.51
PRPF18-202ENST00000378572 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
PRPF18-202ENST00000378572 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
PRPF18-202ENST00000378572 AFDNP55196 1824 aaKnown RBP18.25■□□□□ 0.51
PRPF18-202ENST00000378572 HEG1Q9ULI3 1381 aa18.25■□□□□ 0.51
PRPF18-202ENST00000378572 SERPINB2P05120 415 aa18.25■□□□□ 0.51
PRPF18-202ENST00000378572 C16orf71Q8IYS4 520 aaPredicted RBP18.25■□□□□ 0.51
PRPF18-202ENST00000378572 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
PRPF18-202ENST00000378572 NPHP1O15259 732 aa18.24■□□□□ 0.51
PRPF18-202ENST00000378572 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
PRPF18-202ENST00000378572 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRPF18-202ENST00000378572 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
PRPF18-202ENST00000378572 NMRK2Q9NPI5 230 aa18.24■□□□□ 0.51
PRPF18-202ENST00000378572 CEP350Q5VT06 3117 aa18.24■□□□□ 0.51
PRPF18-202ENST00000378572 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
PRPF18-202ENST00000378572 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
PRPF18-202ENST00000378572 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
PRPF18-202ENST00000378572 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
PRPF18-202ENST00000378572 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
PRPF18-202ENST00000378572 SIPA1L3O60292 1781 aaPredicted RBP18.23■□□□□ 0.51
PRPF18-202ENST00000378572 PHACTR3Q96KR7 559 aa18.22■□□□□ 0.51
PRPF18-202ENST00000378572 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
PRPF18-202ENST00000378572 KDM2BQ8NHM5 1336 aa18.21■□□□□ 0.51
PRPF18-202ENST00000378572 EIF5P55010 431 aaKnown RBP18.21■□□□□ 0.51
PRPF18-202ENST00000378572 RASSF7Q02833 373 aa18.21■□□□□ 0.51
PRPF18-202ENST00000378572 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
PRPF18-202ENST00000378572 SCN7AQ01118 1682 aa18.21■□□□□ 0.51
PRPF18-202ENST00000378572 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
PRPF18-202ENST00000378572 H0YIN7 160 aa18.2■□□□□ 0.5
PRPF18-202ENST00000378572 TOMM70O94826 608 aa18.2■□□□□ 0.5
PRPF18-202ENST00000378572 CARMIL3Q8ND23 1372 aa18.2■□□□□ 0.5
PRPF18-202ENST00000378572 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
PRPF18-202ENST00000378572 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
PRPF18-202ENST00000378572 A1BGP04217 495 aa18.19■□□□□ 0.5
PRPF18-202ENST00000378572 TBC1D9BQ66K14 1250 aa18.19■□□□□ 0.5
PRPF18-202ENST00000378572 TTLL6Q8N841 843 aa18.19■□□□□ 0.5
PRPF18-202ENST00000378572 DLEC1Q9Y238 1755 aa18.19■□□□□ 0.5
PRPF18-202ENST00000378572 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
PRPF18-202ENST00000378572 KCNQ3O43525 872 aa18.18■□□□□ 0.5
PRPF18-202ENST00000378572 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
PRPF18-202ENST00000378572 MCM10Q7L590 875 aa18.18■□□□□ 0.5
PRPF18-202ENST00000378572 CCDC24Q8N4L8 307 aa18.18■□□□□ 0.5
PRPF18-202ENST00000378572 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.54e-6■□□□□ 10.8
PRPF18-202ENST00000378572 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
PRPF18-202ENST00000378572 NEFMP07197 916 aa18.17■□□□□ 0.5
PRPF18-202ENST00000378572 APLP1P51693 650 aa18.17■□□□□ 0.5
PRPF18-202ENST00000378572 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
PRPF18-202ENST00000378572 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
PRPF18-202ENST00000378572 CNBD1Q8NA66 436 aa18.15■□□□□ 0.5
PRPF18-202ENST00000378572 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
PRPF18-202ENST00000378572 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
PRPF18-202ENST00000378572 LMNB1P20700 586 aa18.15■□□□□ 0.5
PRPF18-202ENST00000378572 PDE6BP35913 854 aa18.15■□□□□ 0.5
PRPF18-202ENST00000378572 ST5P78524 1137 aa18.15■□□□□ 0.5
PRPF18-202ENST00000378572 RRAGCQ9HB90 399 aa18.15■□□□□ 0.5
PRPF18-202ENST00000378572 SBF1O95248 1867 aa18.14■□□□□ 0.5
PRPF18-202ENST00000378572 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
PRPF18-202ENST00000378572 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
PRPF18-202ENST00000378572 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
PRPF18-202ENST00000378572 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
PRPF18-202ENST00000378572 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
PRPF18-202ENST00000378572 COL11A2P13942 1736 aaPredicted RBP18.13■□□□□ 0.49
PRPF18-202ENST00000378572 BCORQ6W2J9 1755 aa18.13■□□□□ 0.49
PRPF18-202ENST00000378572 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
PRPF18-202ENST00000378572 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
PRPF18-202ENST00000378572 SNRPA1P09661 255 aaKnown RBP18.12■□□□□ 0.49
PRPF18-202ENST00000378572 BRIP1Q9BX63 1249 aa18.12■□□□□ 0.49
PRPF18-202ENST00000378572 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
PRPF18-202ENST00000378572 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms