RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 LTV1Q96GA3 475 aaPredicted RBP20.13■□□□□ 0.81
PCDHA1-201ENST00000378133 TMX3Q96JJ7 454 aa20.13■□□□□ 0.81
PCDHA1-201ENST00000378133 XRN1Q8IZH2 1706 aaKnown RBP20.13■□□□□ 0.81
PCDHA1-201ENST00000378133 MBD3O95983 291 aa20.12■□□□□ 0.81
PCDHA1-201ENST00000378133 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
PCDHA1-201ENST00000378133 RGPD8O14715 1765 aaPredicted RBP20.12■□□□□ 0.81
PCDHA1-201ENST00000378133 PTMAP06454 111 aaKnown RBP20.12■□□□□ 0.81
PCDHA1-201ENST00000378133 CHMLP26374 656 aa20.11■□□□□ 0.81
PCDHA1-201ENST00000378133 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
PCDHA1-201ENST00000378133 HOXC9P31274 260 aa20.11■□□□□ 0.81
PCDHA1-201ENST00000378133 USP44Q9H0E7 712 aa20.11■□□□□ 0.81
PCDHA1-201ENST00000378133 UNC5CLQ8IV45 518 aa20.11■□□□□ 0.81
PCDHA1-201ENST00000378133 PDIA4P13667 645 aaKnown RBP20.1■□□□□ 0.81
PCDHA1-201ENST00000378133 TAF7Q15545 349 aaPredicted RBP20.1■□□□□ 0.81
PCDHA1-201ENST00000378133 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
PCDHA1-201ENST00000378133 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
PCDHA1-201ENST00000378133 SMAP1Q8IYB5 467 aaPredicted RBP20.09■□□□□ 0.81
PCDHA1-201ENST00000378133 MCCP23508 829 aa20.09■□□□□ 0.81
PCDHA1-201ENST00000378133 PHAXQ9H814 394 aaKnown RBP20.09■□□□□ 0.81
PCDHA1-201ENST00000378133 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
PCDHA1-201ENST00000378133 TSPY26PQ9H489 355 aa20.08■□□□□ 0.81
PCDHA1-201ENST00000378133 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.8
PCDHA1-201ENST00000378133 STAP2Q9UGK3 403 aa20.08■□□□□ 0.8
PCDHA1-201ENST00000378133 USHBP1Q8N6Y0 703 aa20.07■□□□□ 0.8
PCDHA1-201ENST00000378133 MCM2P49736 904 aa20.07■□□□□ 0.8
PCDHA1-201ENST00000378133 DNTTIP2Q5QJE6 756 aaKnown RBP20.07■□□□□ 0.8
PCDHA1-201ENST00000378133 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
PCDHA1-201ENST00000378133 MAP3K5Q99683 1374 aa20.07■□□□□ 0.8
PCDHA1-201ENST00000378133 PIK3C2AO00443 1686 aa20.07■□□□□ 0.8
PCDHA1-201ENST00000378133 HDGFL1Q5TGJ6 251 aa20.06■□□□□ 0.8
PCDHA1-201ENST00000378133 SRCIN1Q9C0H9 1055 aa20.06■□□□□ 0.8
PCDHA1-201ENST00000378133 KCNA6P17658 529 aa20.06■□□□□ 0.8
PCDHA1-201ENST00000378133 NUTM1Q86Y26 1132 aa20.06■□□□□ 0.8
PCDHA1-201ENST00000378133 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHA1-201ENST00000378133 UPF3BQ9BZI7 483 aaKnown RBP20.05■□□□□ 0.8
PCDHA1-201ENST00000378133 ZBTB7CA1YPR0 619 aa20.05■□□□□ 0.8
PCDHA1-201ENST00000378133 IL25Q9H293 177 aa20.05■□□□□ 0.8
PCDHA1-201ENST00000378133 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
PCDHA1-201ENST00000378133 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 BRD1O95696 1058 aa20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 ANAPC15P60006 121 aa20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 CUL4AQ13619 759 aa20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 SYAP1Q96A49 352 aaPredicted RBP20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 MAP4K4O95819 1239 aaPredicted RBP20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 C14orf37Q86TY3 774 aa20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 FAM208AQ9UK61 1670 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 KDM4FA0A1W2PPD8 638 aa20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 SURF6O75683 361 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 PPP1R42Q7Z4L9 355 aa20.04■□□□□ 0.8
PCDHA1-201ENST00000378133 TUBGCP6Q96RT7 1819 aa20.03■□□□□ 0.8
PCDHA1-201ENST00000378133 SSH3Q8TE77 659 aa20.03■□□□□ 0.8
PCDHA1-201ENST00000378133 CACNA1FO60840 1977 aa20.03■□□□□ 0.8
PCDHA1-201ENST00000378133 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
PCDHA1-201ENST00000378133 MYRIPQ8NFW9 859 aa20.03■□□□□ 0.8
PCDHA1-201ENST00000378133 CCDC94Q9BW85 323 aaPredicted RBP20.03■□□□□ 0.8
PCDHA1-201ENST00000378133 LRRC37A3O60309 1634 aa20.02■□□□□ 0.8
PCDHA1-201ENST00000378133 PRDM10Q9NQV6 1147 aa20.02■□□□□ 0.79
PCDHA1-201ENST00000378133 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.79
PCDHA1-201ENST00000378133 NWD1Q149M9 1564 aa20.01■□□□□ 0.79
PCDHA1-201ENST00000378133 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
PCDHA1-201ENST00000378133 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
PCDHA1-201ENST00000378133 MPNDQ8N594 471 aa20■□□□□ 0.79
PCDHA1-201ENST00000378133 INTS4Q96HW7 963 aaKnown RBP20■□□□□ 0.79
PCDHA1-201ENST00000378133 PHF14O94880 888 aa20■□□□□ 0.79
PCDHA1-201ENST00000378133 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
PCDHA1-201ENST00000378133 NBPF7P0C2Y1 421 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-201ENST00000378133 RHPN1Q8TCX5 695 aa19.99■□□□□ 0.79
PCDHA1-201ENST00000378133 LGR6Q9HBX8 967 aa19.99■□□□□ 0.79
PCDHA1-201ENST00000378133 RAB11FIP3O75154 756 aa19.99■□□□□ 0.79
PCDHA1-201ENST00000378133 AOX1Q06278 1338 aa19.99■□□□□ 0.79
PCDHA1-201ENST00000378133 ZNF830Q96NB3 372 aaPredicted RBP19.98■□□□□ 0.79
PCDHA1-201ENST00000378133 POLA2Q14181 598 aa19.98■□□□□ 0.79
PCDHA1-201ENST00000378133 JARID2Q92833 1246 aaPredicted RBP19.98■□□□□ 0.79
PCDHA1-201ENST00000378133 PRIMPOLQ96LW4 560 aa19.98■□□□□ 0.79
PCDHA1-201ENST00000378133 HSPA4P34932 840 aa19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 NOLC1Q14978 699 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 PI4K2BQ8TCG2 481 aa19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 PIBF1Q8WXW3 757 aa19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 GDPD2Q9HCC8 539 aa19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 GADD45BO75293 160 aaPredicted RBP19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 HMGN5P82970 282 aaKnown RBP19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 CHPF2Q9P2E5 772 aa19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
PCDHA1-201ENST00000378133 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 KCNQ3O43525 872 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 ANXA1P04083 346 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 EIF4A1P60842 406 aaKnown RBP19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 BBXQ8WY36 941 aaPredicted RBP19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 UVSSAQ2YD98 709 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 FAM184AQ8NB25 1140 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 TSC1Q92574 1164 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 IL17RAQ96F46 866 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 KIF1BPQ96EK5 621 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
PCDHA1-201ENST00000378133 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms