RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 CT47A1Q5JQC4 288 aaPredicted RBP18.76■□□□□ 0.59
FXN-201ENST00000377270 GCC1Q96CN9 775 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 ARHGEF10O15013 1369 aa18.75■□□□□ 0.59
FXN-201ENST00000377270 GOLGA6L22H0YM25 854 aa18.75■□□□□ 0.59
FXN-201ENST00000377270 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
FXN-201ENST00000377270 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
FXN-201ENST00000377270 SIRT2Q8IXJ6 389 aa18.75■□□□□ 0.59
FXN-201ENST00000377270 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
FXN-201ENST00000377270 PDLIM2Q96JY6 352 aa18.74■□□□□ 0.59
FXN-201ENST00000377270 MIS18AQ9NYP9 233 aa18.74■□□□□ 0.59
FXN-201ENST00000377270 OGFRQ9NZT2 677 aa18.74■□□□□ 0.59
FXN-201ENST00000377270 HMGN5P82970 282 aaKnown RBP18.74■□□□□ 0.59
FXN-201ENST00000377270 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
FXN-201ENST00000377270 EYA1Q99502 592 aa18.74■□□□□ 0.59
FXN-201ENST00000377270 FEZ1Q99689 392 aa18.74■□□□□ 0.59
FXN-201ENST00000377270 PLCD4Q9BRC7 762 aa18.73■□□□□ 0.59
FXN-201ENST00000377270 MYCBPQ99417 103 aaPredicted RBP18.73■□□□□ 0.59
FXN-201ENST00000377270 DDX49Q9Y6V7 483 aaKnown RBP18.73■□□□□ 0.59
FXN-201ENST00000377270 KIAA0232Q92628 1395 aa18.72■□□□□ 0.59
FXN-201ENST00000377270 GTF2A1P52655 376 aaPredicted RBP18.72■□□□□ 0.59
FXN-201ENST00000377270 ZNF445P59923 1031 aa18.72■□□□□ 0.59
FXN-201ENST00000377270 CRB1P82279 1406 aa18.72■□□□□ 0.59
FXN-201ENST00000377270 CLEC17AQ6ZS10 378 aa18.71■□□□□ 0.59
FXN-201ENST00000377270 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
FXN-201ENST00000377270 ERICH4A6NGS2 130 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
FXN-201ENST00000377270 ABTB2Q8N961 1025 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 ANKARQ7Z5J8 1434 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 IRF6O14896 467 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
FXN-201ENST00000377270 KDRP35968 1356 aa18.69■□□□□ 0.58
FXN-201ENST00000377270 CEP83Q9Y592 693 aa18.69■□□□□ 0.58
FXN-201ENST00000377270 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
FXN-201ENST00000377270 SLC4A2P04920 1241 aa18.69■□□□□ 0.58
FXN-201ENST00000377270 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
FXN-201ENST00000377270 RSPH14Q9UHP6 348 aa18.69■□□□□ 0.58
FXN-201ENST00000377270 NOP2P46087 812 aaKnown RBP18.68■□□□□ 0.58
FXN-201ENST00000377270 TERF2Q15554 542 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 BMP2KLQ5H9B9 411 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 NCAPGQ9BPX3 1015 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 TMX1Q9H3N1 280 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 CCDC39Q9UFE4 941 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 SSFA2P28290 1259 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 HOXC9P31274 260 aa18.68■□□□□ 0.58
FXN-201ENST00000377270 CEP170BQ9Y4F5 1589 aaPredicted RBP18.67■□□□□ 0.58
FXN-201ENST00000377270 RIMS1Q86UR5 1692 aaKnown RBP18.67■□□□□ 0.58
FXN-201ENST00000377270 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
FXN-201ENST00000377270 RBM33Q96EV2 1170 aaKnown RBP18.67■□□□□ 0.58
FXN-201ENST00000377270 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
FXN-201ENST00000377270 CEP120Q8N960 986 aa18.67■□□□□ 0.58
FXN-201ENST00000377270 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
FXN-201ENST00000377270 PTPRCP08575 1304 aa18.66■□□□□ 0.58
FXN-201ENST00000377270 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
FXN-201ENST00000377270 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
FXN-201ENST00000377270 RGS12O14924 1447 aa18.66■□□□□ 0.58
FXN-201ENST00000377270 ANKRD7Q92527 254 aa18.65■□□□□ 0.58
FXN-201ENST00000377270 ZNF592Q92610 1267 aa18.65■□□□□ 0.58
FXN-201ENST00000377270 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
FXN-201ENST00000377270 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
FXN-201ENST00000377270 ZSCAN23Q3MJ62 389 aa18.64■□□□□ 0.57
FXN-201ENST00000377270 MPNDQ8N594 471 aa18.64■□□□□ 0.57
FXN-201ENST00000377270 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
FXN-201ENST00000377270 CCDC172P0C7W6 258 aa18.64■□□□□ 0.57
FXN-201ENST00000377270 DCTPP1Q9H773 170 aa18.64■□□□□ 0.57
FXN-201ENST00000377270 DHX16O60231 1041 aaKnown RBP18.63■□□□□ 0.57
FXN-201ENST00000377270 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
FXN-201ENST00000377270 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
FXN-201ENST00000377270 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
FXN-201ENST00000377270 KIF2CQ99661 725 aa18.63■□□□□ 0.57
FXN-201ENST00000377270 SH3BP1Q9Y3L3 701 aa18.63■□□□□ 0.57
FXN-201ENST00000377270 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
FXN-201ENST00000377270 CD2BP2O95400 341 aaKnown RBP18.62■□□□□ 0.57
FXN-201ENST00000377270 SATB1Q01826 763 aa18.62■□□□□ 0.57
FXN-201ENST00000377270 HSP90AB3PQ58FF7 597 aa18.62■□□□□ 0.57
FXN-201ENST00000377270 CAVIN1Q6NZI2 390 aaKnown RBP18.62■□□□□ 0.57
FXN-201ENST00000377270 G2E3Q7L622 706 aa18.62■□□□□ 0.57
FXN-201ENST00000377270 MSH6P52701 1360 aa18.62■□□□□ 0.57
FXN-201ENST00000377270 RPAP2Q8IXW5 612 aaPredicted RBP18.62■□□□□ 0.57
FXN-201ENST00000377270 TAOK2Q9UL54 1235 aa18.62■□□□□ 0.57
FXN-201ENST00000377270 MEIS3Q99687 375 aa18.61■□□□□ 0.57
FXN-201ENST00000377270 SEMA3FQ13275 785 aa18.61■□□□□ 0.57
FXN-201ENST00000377270 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
FXN-201ENST00000377270 SLC4A10Q6U841 1118 aa18.61■□□□□ 0.57
FXN-201ENST00000377270 F6X3S4 739 aa18.6■□□□□ 0.57
FXN-201ENST00000377270 GPATCH11Q8N954 259 aa18.6■□□□□ 0.57
FXN-201ENST00000377270 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
FXN-201ENST00000377270 RAD51AP2Q09MP3 1159 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 GOLIM4O00461 696 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 ICE2Q659A1 982 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 TBC1D9Q6ZT07 1266 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 ATP10DQ9P241 1426 aa18.59■□□□□ 0.57
FXN-201ENST00000377270 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.57
FXN-201ENST00000377270 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.57
FXN-201ENST00000377270 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms