RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 STARD3NLO95772 234 aa31.26■■■□□ 2.59
C9orf47-202ENST00000375850 CEP350Q5VT06 3117 aa31.26■■■□□ 2.59
C9orf47-202ENST00000375850 TOMM70O94826 608 aa31.25■■■□□ 2.59
C9orf47-202ENST00000375850 ZBTB1Q9Y2K1 713 aa31.25■■■□□ 2.59
C9orf47-202ENST00000375850 C9orf131Q5VYM1 1079 aa31.24■■■□□ 2.59
C9orf47-202ENST00000375850 ARFGEF1Q9Y6D6 1849 aa31.24■■■□□ 2.59
C9orf47-202ENST00000375850 COL3A1P02461 1466 aaPredicted RBP31.23■■■□□ 2.59
C9orf47-202ENST00000375850 TEX13AQ9BXU3 409 aaPredicted RBP31.23■■■□□ 2.59
C9orf47-202ENST00000375850 A0A087WZG4 1122 aa31.22■■■□□ 2.59
C9orf47-202ENST00000375850 GNAT3A8MTJ3 354 aa31.22■■■□□ 2.59
C9orf47-202ENST00000375850 U2SURPO15042 1029 aaKnown RBP31.22■■■□□ 2.59
C9orf47-202ENST00000375850 TEFQ10587 303 aa31.22■■■□□ 2.59
C9orf47-202ENST00000375850 NFIXQ14938 502 aa31.22■■■□□ 2.59
C9orf47-202ENST00000375850 CHRNA5P30532 468 aa31.2■■■□□ 2.59
C9orf47-202ENST00000375850 APLP1P51693 650 aa31.18■■■□□ 2.58
C9orf47-202ENST00000375850 CFAP53Q96M91 514 aa31.18■■■□□ 2.58
C9orf47-202ENST00000375850 KDM2BQ8NHM5 1336 aa31.18■■■□□ 2.58
C9orf47-202ENST00000375850 SERPINB2P05120 415 aa31.17■■■□□ 2.58
C9orf47-202ENST00000375850 EIF5P55010 431 aaKnown RBP31.17■■■□□ 2.58
C9orf47-202ENST00000375850 ZNF790Q6PG37 636 aa31.17■■■□□ 2.58
C9orf47-202ENST00000375850 UBR2Q8IWV8 1755 aa31.17■■■□□ 2.58
C9orf47-202ENST00000375850 CANXP27824 592 aaKnown RBP31.16■■■□□ 2.58
C9orf47-202ENST00000375850 IL17REQ8NFR9 667 aa31.16■■■□□ 2.58
C9orf47-202ENST00000375850 BCL2L12Q9HB09 334 aa31.16■■■□□ 2.58
C9orf47-202ENST00000375850 ZC3H4Q9UPT8 1303 aaKnown RBP31.16■■■□□ 2.58
C9orf47-202ENST00000375850 HEG1Q9ULI3 1381 aa31.16■■■□□ 2.58
C9orf47-202ENST00000375850 NMRK2Q9NPI5 230 aa31.15■■■□□ 2.58
C9orf47-202ENST00000375850 RNF181Q9P0P0 153 aa31.15■■■□□ 2.58
C9orf47-202ENST00000375850 RBM46Q8TBY0 533 aaKnown RBP31.14■■■□□ 2.58
C9orf47-202ENST00000375850 ZNF496Q96IT1 587 aaPredicted RBP31.14■■■□□ 2.58
C9orf47-202ENST00000375850 VIRMAQ69YN4 1812 aaKnown RBP31.14■■■□□ 2.58
C9orf47-202ENST00000375850 NRXN2Q9P2S2 1712 aa31.13■■■□□ 2.57
C9orf47-202ENST00000375850 C16orf71Q8IYS4 520 aaPredicted RBP31.13■■■□□ 2.57
C9orf47-202ENST00000375850 PDZRN3Q9UPQ7 1066 aa31.13■■■□□ 2.57
C9orf47-202ENST00000375850 FMNL2Q96PY5 1086 aa31.12■■■□□ 2.57
C9orf47-202ENST00000375850 NUDCQ9Y266 331 aa31.12■■■□□ 2.57
C9orf47-202ENST00000375850 CEMIPQ8WUJ3 1361 aa31.12■■■□□ 2.57
C9orf47-202ENST00000375850 IL6STP40189 918 aaPredicted RBP31.11■■■□□ 2.57
C9orf47-202ENST00000375850 NPM2Q86SE8 214 aaKnown RBP31.11■■■□□ 2.57
C9orf47-202ENST00000375850 TTLL6Q8N841 843 aa31.1■■■□□ 2.57
C9orf47-202ENST00000375850 H0YIN7 160 aa31.09■■■□□ 2.57
C9orf47-202ENST00000375850 FSTL1Q12841 308 aa31.08■■■□□ 2.57
C9orf47-202ENST00000375850 CNGB1Q14028 1251 aaPredicted RBP31.08■■■□□ 2.57
C9orf47-202ENST00000375850 PRKAR2BP31323 418 aa31.07■■■□□ 2.56
C9orf47-202ENST00000375850 C2CD5Q86YS7 1000 aa31.07■■■□□ 2.56
C9orf47-202ENST00000375850 RSPH6AQ9H0K4 717 aa31.07■■■□□ 2.56
C9orf47-202ENST00000375850 LMNB1P20700 586 aa31.06■■■□□ 2.56
C9orf47-202ENST00000375850 IFFO2Q5TF58 517 aa31.06■■■□□ 2.56
C9orf47-202ENST00000375850 AFDNP55196 1824 aaKnown RBP31.05■■■□□ 2.56
C9orf47-202ENST00000375850 BTBD11A6QL63 1104 aa31.05■■■□□ 2.56
C9orf47-202ENST00000375850 PDE6BP35913 854 aa31.04■■■□□ 2.56
C9orf47-202ENST00000375850 BICDL1Q6ZP65 573 aa31.04■■■□□ 2.56
C9orf47-202ENST00000375850 BRIP1Q9BX63 1249 aa31.04■■■□□ 2.56
C9orf47-202ENST00000375850 CARMIL3Q8ND23 1372 aa31.04■■■□□ 2.56
C9orf47-202ENST00000375850 PHACTR3Q96KR7 559 aa31.03■■■□□ 2.56
C9orf47-202ENST00000375850 SIPA1L3O60292 1781 aaPredicted RBP31.02■■■□□ 2.56
C9orf47-202ENST00000375850 TBC1D9BQ66K14 1250 aa31.02■■■□□ 2.56
C9orf47-202ENST00000375850 RTF1Q92541 710 aaKnown RBP31.01■■■□□ 2.55
C9orf47-202ENST00000375850 ZNF330Q9Y3S2 320 aaPredicted RBP31.01■■■□□ 2.55
C9orf47-202ENST00000375850 DLEC1Q9Y238 1755 aa31.01■■■□□ 2.55
C9orf47-202ENST00000375850 TBC1D2BQ9UPU7 963 aa31■■■□□ 2.55
C9orf47-202ENST00000375850 RASSF7Q02833 373 aa30.99■■■□□ 2.55
C9orf47-202ENST00000375850 SETDB2Q96T68 719 aa30.99■■■□□ 2.55
C9orf47-202ENST00000375850 RRAGCQ9HB90 399 aa30.99■■■□□ 2.55
C9orf47-202ENST00000375850 SCN7AQ01118 1682 aa30.99■■■□□ 2.55
C9orf47-202ENST00000375850 TNRC6CQ9HCJ0 1690 aaKnown RBP30.98■■■□□ 2.55
C9orf47-202ENST00000375850 HTATSF1O43719 755 aaKnown RBP30.98■■■□□ 2.55
C9orf47-202ENST00000375850 U2AF1L5P0DN76 240 aaPredicted RBP30.98■■■□□ 2.55
C9orf47-202ENST00000375850 U2AF1Q01081 240 aaKnown RBP eCLIP30.98■■■□□ 2.55
C9orf47-202ENST00000375850 A1BGP04217 495 aa30.97■■■□□ 2.55
C9orf47-202ENST00000375850 PPP2R1AP30153 589 aa30.97■■■□□ 2.55
C9orf47-202ENST00000375850 PRR5LQ6MZQ0 368 aa30.97■■■□□ 2.55
C9orf47-202ENST00000375850 DNAJC5GQ8N7S2 189 aa30.97■■■□□ 2.55
C9orf47-202ENST00000375850 SBF1O95248 1867 aa30.96■■■□□ 2.55
C9orf47-202ENST00000375850 GLTPD2A6NH11 291 aa30.96■■■□□ 2.55
C9orf47-202ENST00000375850 CAMTA2O94983 1202 aa30.96■■■□□ 2.55
C9orf47-202ENST00000375850 SNRPA1P09661 255 aaKnown RBP30.95■■■□□ 2.55
C9orf47-202ENST00000375850 CNBD1Q8NA66 436 aa30.95■■■□□ 2.55
C9orf47-202ENST00000375850 SMC1BQ8NDV3 1235 aa30.95■■■□□ 2.55
C9orf47-202ENST00000375850 RGL2O15211 777 aa30.94■■■□□ 2.54
C9orf47-202ENST00000375850 NPHP1O15259 732 aa30.94■■■□□ 2.54
C9orf47-202ENST00000375850 ST5P78524 1137 aa30.94■■■□□ 2.54
C9orf47-202ENST00000375850 CLEC4GQ6UXB4 293 aa30.94■■■□□ 2.54
C9orf47-202ENST00000375850 DZIP3Q86Y13 1208 aaKnown RBP30.94■■■□□ 2.54
C9orf47-202ENST00000375850 ZNF622Q969S3 477 aaKnown RBP eCLIP30.94■■■□□ 2.54
C9orf47-202ENST00000375850 NFKBIEO00221 500 aa30.93■■■□□ 2.54
C9orf47-202ENST00000375850 VEGFAP15692 232 aaPredicted RBP30.93■■■□□ 2.54
C9orf47-202ENST00000375850 ZNF652Q9Y2D9 606 aa30.93■■■□□ 2.54
C9orf47-202ENST00000375850 KCNQ3O43525 872 aa30.92■■■□□ 2.54
C9orf47-202ENST00000375850 CNKSR1Q969H4 720 aa30.92■■■□□ 2.54
C9orf47-202ENST00000375850 USP16Q9Y5T5 823 aa30.91■■■□□ 2.54
C9orf47-202ENST00000375850 SOGA3Q5TF21 947 aa30.9■■■□□ 2.54
C9orf47-202ENST00000375850 STYK1Q6J9G0 422 aa30.9■■■□□ 2.54
C9orf47-202ENST00000375850 DPY19L2Q6NUT2 758 aa30.9■■■□□ 2.54
C9orf47-202ENST00000375850 PRELPP51888 382 aa30.89■■■□□ 2.54
C9orf47-202ENST00000375850 LTBP3Q9NS15 1303 aa30.89■■■□□ 2.54
C9orf47-202ENST00000375850 NEFMP07197 916 aa30.88■■■□□ 2.53
C9orf47-202ENST00000375850 MCM10Q7L590 875 aa30.88■■■□□ 2.53
C9orf47-202ENST00000375850 WDR90Q96KV7 1748 aa30.87■■■□□ 2.53
C9orf47-202ENST00000375850 C21orf2O43822 256 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms