RNA–Protein interactions for RNA: ENST00000375638.7

C6orf48-203, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-203ENST00000375638 TJP1Q07157 1748 aa22.78■■□□□ 1.24
C6orf48-203ENST00000375638 CCDC27Q2M243 656 aa22.78■■□□□ 1.24
C6orf48-203ENST00000375638 CASZ1Q86V15 1759 aa22.78■■□□□ 1.24
C6orf48-203ENST00000375638 CICQ96RK0 1608 aaPredicted RBP22.78■■□□□ 1.24
C6orf48-203ENST00000375638 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.24
C6orf48-203ENST00000375638 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.23
C6orf48-203ENST00000375638 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
C6orf48-203ENST00000375638 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
C6orf48-203ENST00000375638 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
C6orf48-203ENST00000375638 USP16Q9Y5T5 823 aa22.76■■□□□ 1.23
C6orf48-203ENST00000375638 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
C6orf48-203ENST00000375638 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
C6orf48-203ENST00000375638 RFC4P35249 363 aa22.75■■□□□ 1.23
C6orf48-203ENST00000375638 WWC1Q8IX03 1113 aa22.75■■□□□ 1.23
C6orf48-203ENST00000375638 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
C6orf48-203ENST00000375638 TUBGCP6Q96RT7 1819 aa22.75■■□□□ 1.23
C6orf48-203ENST00000375638 GIGYF1O75420 1035 aaPredicted RBP22.74■■□□□ 1.23
C6orf48-203ENST00000375638 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
C6orf48-203ENST00000375638 UBR3Q6ZT12 1888 aa22.74■■□□□ 1.23
C6orf48-203ENST00000375638 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
C6orf48-203ENST00000375638 A1BGP04217 495 aa22.73■■□□□ 1.23
C6orf48-203ENST00000375638 GNAI1P63096 354 aa22.73■■□□□ 1.23
C6orf48-203ENST00000375638 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
C6orf48-203ENST00000375638 SOS1Q07889 1333 aaPredicted RBP22.73■■□□□ 1.23
C6orf48-203ENST00000375638 KDM3BQ7LBC6 1761 aa22.72■■□□□ 1.23
C6orf48-203ENST00000375638 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
C6orf48-203ENST00000375638 PTGER2P43116 358 aa22.72■■□□□ 1.23
C6orf48-203ENST00000375638 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
C6orf48-203ENST00000375638 POLD1P28340 1107 aa22.7■■□□□ 1.22
C6orf48-203ENST00000375638 MSL1Q68DK7 614 aa22.7■■□□□ 1.22
C6orf48-203ENST00000375638 NPM2Q86SE8 214 aaKnown RBP22.7■■□□□ 1.22
C6orf48-203ENST00000375638 PPP1R1BQ9UD71 204 aaPredicted RBP22.7■■□□□ 1.22
C6orf48-203ENST00000375638 LRP5O75197 1615 aa22.69■■□□□ 1.22
C6orf48-203ENST00000375638 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
C6orf48-203ENST00000375638 EIF5P55010 431 aaKnown RBP22.69■■□□□ 1.22
C6orf48-203ENST00000375638 SGIP1Q9BQI5 828 aa22.69■■□□□ 1.22
C6orf48-203ENST00000375638 ZNF330Q9Y3S2 320 aaPredicted RBP22.69■■□□□ 1.22
C6orf48-203ENST00000375638 A0A087WZG4 1122 aa22.68■■□□□ 1.22
C6orf48-203ENST00000375638 WDR63Q8IWG1 891 aa22.68■■□□□ 1.22
C6orf48-203ENST00000375638 COL15A1P39059 1388 aa22.67■■□□□ 1.22
C6orf48-203ENST00000375638 IL16Q14005 1332 aa22.67■■□□□ 1.22
C6orf48-203ENST00000375638 ZPR1O75312 459 aa22.67■■□□□ 1.22
C6orf48-203ENST00000375638 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
C6orf48-203ENST00000375638 PIP4K2AP48426 406 aaPredicted RBP22.66■■□□□ 1.22
C6orf48-203ENST00000375638 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
C6orf48-203ENST00000375638 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
C6orf48-203ENST00000375638 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
C6orf48-203ENST00000375638 GYS1P13807 737 aa22.65■■□□□ 1.22
C6orf48-203ENST00000375638 ARXQ96QS3 562 aa22.65■■□□□ 1.22
C6orf48-203ENST00000375638 NARFQ9UHQ1 456 aa22.65■■□□□ 1.22
C6orf48-203ENST00000375638 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
C6orf48-203ENST00000375638 EIF2S2P20042 333 aaKnown RBP22.64■■□□□ 1.21
C6orf48-203ENST00000375638 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
C6orf48-203ENST00000375638 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
C6orf48-203ENST00000375638 USPL1Q5W0Q7 1092 aa22.63■■□□□ 1.21
C6orf48-203ENST00000375638 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
C6orf48-203ENST00000375638 HOXB7P09629 217 aa22.62■■□□□ 1.21
C6orf48-203ENST00000375638 DUSP27Q5VZP5 1158 aa22.62■■□□□ 1.21
C6orf48-203ENST00000375638 TBC1D2BQ9UPU7 963 aa22.62■■□□□ 1.21
C6orf48-203ENST00000375638 ERBB4Q15303 1308 aa22.61■■□□□ 1.21
C6orf48-203ENST00000375638 MMP10P09238 476 aa22.6■■□□□ 1.21
C6orf48-203ENST00000375638 FKBP8Q14318 412 aa22.6■■□□□ 1.21
C6orf48-203ENST00000375638 DZIP3Q86Y13 1208 aaKnown RBP22.6■■□□□ 1.21
C6orf48-203ENST00000375638 ELL2O00472 640 aaPredicted RBP22.59■■□□□ 1.21
C6orf48-203ENST00000375638 MYL6BP14649 208 aa22.59■■□□□ 1.21
C6orf48-203ENST00000375638 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
C6orf48-203ENST00000375638 NECTIN2Q92692 538 aa22.59■■□□□ 1.21
C6orf48-203ENST00000375638 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
C6orf48-203ENST00000375638 LAMB4A4D0S4 1761 aa22.58■■□□□ 1.2
C6orf48-203ENST00000375638 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
C6orf48-203ENST00000375638 C4AP0C0L4 1744 aa22.57■■□□□ 1.2
C6orf48-203ENST00000375638 MYH16Q9H6N6 1097 aa22.57■■□□□ 1.2
C6orf48-203ENST00000375638 BCL2L12Q9HB09 334 aa22.57■■□□□ 1.2
C6orf48-203ENST00000375638 COL24A1Q17RW2 1714 aa22.57■■□□□ 1.2
C6orf48-203ENST00000375638 CAMTA2O94983 1202 aa22.56■■□□□ 1.2
C6orf48-203ENST00000375638 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
C6orf48-203ENST00000375638 PDIA6Q15084 440 aa22.56■■□□□ 1.2
C6orf48-203ENST00000375638 CHMP4AQ9BY43 222 aa22.56■■□□□ 1.2
C6orf48-203ENST00000375638 FHDC1Q9C0D6 1143 aaPredicted RBP22.56■■□□□ 1.2
C6orf48-203ENST00000375638 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
C6orf48-203ENST00000375638 KLHL34Q8N239 644 aa22.55■■□□□ 1.2
C6orf48-203ENST00000375638 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
C6orf48-203ENST00000375638 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
C6orf48-203ENST00000375638 PARP3Q9Y6F1 533 aa22.55■■□□□ 1.2
C6orf48-203ENST00000375638 TM4SF1P30408 202 aa22.54■■□□□ 1.2
C6orf48-203ENST00000375638 PROSER3Q2NL68 480 aa22.54■■□□□ 1.2
C6orf48-203ENST00000375638 TSPYL6Q8N831 410 aa22.54■■□□□ 1.2
C6orf48-203ENST00000375638 CHPF2Q9P2E5 772 aa22.54■■□□□ 1.2
C6orf48-203ENST00000375638 DBF4Q9UBU7 674 aaPredicted RBP22.54■■□□□ 1.2
C6orf48-203ENST00000375638 ANXA1P04083 346 aa22.53■■□□□ 1.2
C6orf48-203ENST00000375638 NFIXQ14938 502 aa22.53■■□□□ 1.2
C6orf48-203ENST00000375638 KIF6Q6ZMV9 814 aa22.53■■□□□ 1.2
C6orf48-203ENST00000375638 ZNF652Q9Y2D9 606 aa22.53■■□□□ 1.2
C6orf48-203ENST00000375638 CLEC4GQ6UXB4 293 aa22.52■■□□□ 1.2
C6orf48-203ENST00000375638 SYT17Q9BSW7 474 aa22.52■■□□□ 1.2
C6orf48-203ENST00000375638 RGL2O15211 777 aa22.51■■□□□ 1.19
C6orf48-203ENST00000375638 DDR1Q08345 913 aa22.51■■□□□ 1.19
C6orf48-203ENST00000375638 TWISTNBQ3B726 338 aaPredicted RBP22.51■■□□□ 1.19
C6orf48-203ENST00000375638 BICDL1Q6ZP65 573 aa22.51■■□□□ 1.19
C6orf48-203ENST00000375638 TTLL7Q6ZT98 887 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms