RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 BCS1LQ9Y276 419 aa19.02■□□□□ 0.64
NELFE-201ENST00000375425 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
NELFE-201ENST00000375425 C4AP0C0L4 1744 aa19.01■□□□□ 0.63
NELFE-201ENST00000375425 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
NELFE-201ENST00000375425 KCNA3P22001 575 aa19■□□□□ 0.63
NELFE-201ENST00000375425 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
NELFE-201ENST00000375425 COL15A1P39059 1388 aa19■□□□□ 0.63
NELFE-201ENST00000375425 BTBD11A6QL63 1104 aa19■□□□□ 0.63
NELFE-201ENST00000375425 HEG1Q9ULI3 1381 aa18.99■□□□□ 0.63
NELFE-201ENST00000375425 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
NELFE-201ENST00000375425 KCNQ3O43525 872 aa18.99■□□□□ 0.63
NELFE-201ENST00000375425 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
NELFE-201ENST00000375425 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
NELFE-201ENST00000375425 FMNL2Q96PY5 1086 aa18.99■□□□□ 0.63
NELFE-201ENST00000375425 BCL2L12Q9HB09 334 aa18.99■□□□□ 0.63
NELFE-201ENST00000375425 VIRMAQ69YN4 1812 aaKnown RBP18.98■□□□□ 0.63
NELFE-201ENST00000375425 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
NELFE-201ENST00000375425 NFIXQ14938 502 aa18.98■□□□□ 0.63
NELFE-201ENST00000375425 MCM10Q7L590 875 aa18.98■□□□□ 0.63
NELFE-201ENST00000375425 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
NELFE-201ENST00000375425 ARHGAP27Q6ZUM4 889 aa18.97■□□□□ 0.63
NELFE-201ENST00000375425 GPBP1L1Q9HC44 474 aaPredicted RBP18.97■□□□□ 0.63
NELFE-201ENST00000375425 A0A087WZG4 1122 aa18.96■□□□□ 0.63
NELFE-201ENST00000375425 DCTN1Q14203 1278 aa18.96■□□□□ 0.63
NELFE-201ENST00000375425 ZNF526Q8TF50 670 aaPredicted RBP18.96■□□□□ 0.63
NELFE-201ENST00000375425 ADCY9O60503 1353 aa18.96■□□□□ 0.63
NELFE-201ENST00000375425 N4BP2Q86UW6 1770 aaPredicted RBP18.95■□□□□ 0.62
NELFE-201ENST00000375425 A1BGP04217 495 aa18.95■□□□□ 0.62
NELFE-201ENST00000375425 CHRNA5P30532 468 aa18.95■□□□□ 0.62
NELFE-201ENST00000375425 ZNF330Q9Y3S2 320 aaPredicted RBP18.95■□□□□ 0.62
NELFE-201ENST00000375425 SERPINB2P05120 415 aa18.94■□□□□ 0.62
NELFE-201ENST00000375425 KIAA1551Q9HCM1 1747 aa18.94■□□□□ 0.62
NELFE-201ENST00000375425 UBR2Q8IWV8 1755 aa18.94■□□□□ 0.62
NELFE-201ENST00000375425 HTATSF1O43719 755 aaKnown RBP18.93■□□□□ 0.62
NELFE-201ENST00000375425 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
NELFE-201ENST00000375425 DALRD3Q5D0E6 543 aaKnown RBP18.93■□□□□ 0.62
NELFE-201ENST00000375425 TBC1D2BQ9UPU7 963 aa18.93■□□□□ 0.62
NELFE-201ENST00000375425 USP16Q9Y5T5 823 aa18.93■□□□□ 0.62
NELFE-201ENST00000375425 SENP3-EIF4A1A0A087X0R7 540 aa18.92■□□□□ 0.62
NELFE-201ENST00000375425 BICDL1Q6ZP65 573 aa18.92■□□□□ 0.62
NELFE-201ENST00000375425 NEFMP07197 916 aa18.91■□□□□ 0.62
NELFE-201ENST00000375425 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
NELFE-201ENST00000375425 CEP350Q5VT06 3117 aa18.91■□□□□ 0.62
NELFE-201ENST00000375425 PRAMEF22A3QJZ6 481 aa18.91■□□□□ 0.62
NELFE-201ENST00000375425 TBC1D9BQ66K14 1250 aa18.91■□□□□ 0.62
NELFE-201ENST00000375425 SIPA1L3O60292 1781 aaPredicted RBP18.9■□□□□ 0.62
NELFE-201ENST00000375425 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
NELFE-201ENST00000375425 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
NELFE-201ENST00000375425 PLEKHF1Q96S99 279 aa18.9■□□□□ 0.62
NELFE-201ENST00000375425 MIS18AQ9NYP9 233 aa18.89■□□□□ 0.61
NELFE-201ENST00000375425 PIP4K2AP48426 406 aaPredicted RBP18.88■□□□□ 0.61
NELFE-201ENST00000375425 CAMTA2O94983 1202 aa18.87■□□□□ 0.61
NELFE-201ENST00000375425 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
NELFE-201ENST00000375425 RALBP1Q15311 655 aa18.86■□□□□ 0.61
NELFE-201ENST00000375425 C9orf131Q5VYM1 1079 aa18.86■□□□□ 0.61
NELFE-201ENST00000375425 DZIP3Q86Y13 1208 aaKnown RBP18.86■□□□□ 0.61
NELFE-201ENST00000375425 C2CD5Q86YS7 1000 aa18.86■□□□□ 0.61
NELFE-201ENST00000375425 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
NELFE-201ENST00000375425 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
NELFE-201ENST00000375425 H0YIN7 160 aa18.85■□□□□ 0.61
NELFE-201ENST00000375425 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
NELFE-201ENST00000375425 KIF3CO14782 793 aa18.84■□□□□ 0.61
NELFE-201ENST00000375425 BRCA1P38398 1863 aaKnown RBP18.84■□□□□ 0.61
NELFE-201ENST00000375425 PRR5LQ6MZQ0 368 aa18.83■□□□□ 0.61
NELFE-201ENST00000375425 CCDC24Q8N4L8 307 aa18.83■□□□□ 0.61
NELFE-201ENST00000375425 TTLL6Q8N841 843 aa18.83■□□□□ 0.61
NELFE-201ENST00000375425 BRIP1Q9BX63 1249 aa18.83■□□□□ 0.61
NELFE-201ENST00000375425 CARMIL3Q8ND23 1372 aa18.83■□□□□ 0.61
NELFE-201ENST00000375425 NBPF26B4DH59 902 aa18.83■□□□□ 0.6
NELFE-201ENST00000375425 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.6
NELFE-201ENST00000375425 NBPF15Q8N660 670 aa18.83■□□□□ 0.6
NELFE-201ENST00000375425 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
NELFE-201ENST00000375425 AFDNP55196 1824 aaKnown RBP18.82■□□□□ 0.6
NELFE-201ENST00000375425 NRXN2Q9P2S2 1712 aa18.82■□□□□ 0.6
NELFE-201ENST00000375425 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
NELFE-201ENST00000375425 PDE6BP35913 854 aa18.82■□□□□ 0.6
NELFE-201ENST00000375425 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
NELFE-201ENST00000375425 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
NELFE-201ENST00000375425 RNF181Q9P0P0 153 aa18.82■□□□□ 0.6
NELFE-201ENST00000375425 ZNF622Q969S3 477 aaKnown RBP eCLIP18.81■□□□□ 0.65e-7■□□□□ 9.9
NELFE-201ENST00000375425 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
NELFE-201ENST00000375425 NPHP1O15259 732 aa18.8■□□□□ 0.6
NELFE-201ENST00000375425 CNBD1Q8NA66 436 aa18.8■□□□□ 0.6
NELFE-201ENST00000375425 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
NELFE-201ENST00000375425 RASSF7Q02833 373 aa18.79■□□□□ 0.6
NELFE-201ENST00000375425 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
NELFE-201ENST00000375425 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
NELFE-201ENST00000375425 EIF4A1P60842 406 aaKnown RBP18.78■□□□□ 0.6
NELFE-201ENST00000375425 RIPK4P57078 832 aa18.77■□□□□ 0.6
NELFE-201ENST00000375425 ST5P78524 1137 aa18.77■□□□□ 0.6
NELFE-201ENST00000375425 HSPA6P17066 643 aa18.76■□□□□ 0.59
NELFE-201ENST00000375425 NBPF5PQ86XG9 351 aaPredicted RBP18.76■□□□□ 0.59
NELFE-201ENST00000375425 NGEFQ8N5V2 710 aa18.76■□□□□ 0.59
NELFE-201ENST00000375425 NIP7Q9Y221 180 aaKnown RBP eCLIP18.76■□□□□ 0.59
NELFE-201ENST00000375425 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
NELFE-201ENST00000375425 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
NELFE-201ENST00000375425 TOMM70O94826 608 aa18.75■□□□□ 0.59
NELFE-201ENST00000375425 LMNB1P20700 586 aa18.75■□□□□ 0.59
NELFE-201ENST00000375425 HLFQ16534 295 aa18.75■□□□□ 0.59
NELFE-201ENST00000375425 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms