RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 KCNQ3O43525 872 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 GSPT1P15170 499 aaKnown RBP10.1□□□□□ -0.79
UBR4-202ENST00000375224 SNX21Q969T3 373 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 LRRFIP2Q9Y608 721 aaKnown RBP10.1□□□□□ -0.79
UBR4-202ENST00000375224 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
UBR4-202ENST00000375224 XIRP1Q702N8 1843 aaKnown RBP10.09□□□□□ -0.79
UBR4-202ENST00000375224 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
UBR4-202ENST00000375224 RAB11FIP3O75154 756 aa10.09□□□□□ -0.79
UBR4-202ENST00000375224 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
UBR4-202ENST00000375224 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
UBR4-202ENST00000375224 ALDH1L1O75891 902 aa10.09□□□□□ -0.79
UBR4-202ENST00000375224 DDX58O95786 925 aaKnown RBP10.09□□□□□ -0.79
UBR4-202ENST00000375224 PHKG2P15735 406 aa10.09□□□□□ -0.79
UBR4-202ENST00000375224 C16orf71Q8IYS4 520 aaPredicted RBP10.09□□□□□ -0.79
UBR4-202ENST00000375224 SLC52A2Q9HAB3 445 aa10.09□□□□□ -0.79
UBR4-202ENST00000375224 IBTKQ9P2D0 1353 aaPredicted RBP10.08□□□□□ -0.8
UBR4-202ENST00000375224 PI4KAP2A4QPH2 592 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 APBB1O00213 710 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 SMARCA5O60264 1052 aaPredicted RBP10.08□□□□□ -0.8
UBR4-202ENST00000375224 BEND3Q5T5X7 828 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 BRINP3Q76B58 766 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 PI4KAP1Q8N8J0 262 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 SSH3Q8TE77 659 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 HSP90AB4PQ58FF6 505 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 KSR2Q6VAB6 950 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 DHX37Q8IY37 1157 aaKnown RBP10.08□□□□□ -0.8
UBR4-202ENST00000375224 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 PDE1AP54750 535 aa10.08□□□□□ -0.8
UBR4-202ENST00000375224 STRCQ7RTU9 1775 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 ZNF790Q6PG37 636 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 CABLES1Q8TDN4 633 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 DDX21Q9NR30 783 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBR4-202ENST00000375224 EXOC6BQ9Y2D4 811 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 AOX1Q06278 1338 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 PNMA6EA0A0J9YXQ4 647 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 SDSP20132 328 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 SLAIN2Q9P270 581 aa10.07□□□□□ -0.8
UBR4-202ENST00000375224 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
UBR4-202ENST00000375224 REC8O95072 547 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 PKD1L3Q7Z443 1732 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 MEGF6O75095 1541 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 POLA2Q14181 598 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 CHRNA2Q15822 529 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 OTUD7AQ8TE49 926 aaPredicted RBP10.06□□□□□ -0.8
UBR4-202ENST00000375224 SLKQ9H2G2 1235 aaPredicted RBP10.06□□□□□ -0.8
UBR4-202ENST00000375224 ADCY9O60503 1353 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 TTC5Q8N0Z6 440 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 IPO4Q8TEX9 1081 aaKnown RBP10.06□□□□□ -0.8
UBR4-202ENST00000375224 PDCL3Q9H2J4 239 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 ANTXR1Q9H6X2 564 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 STAP2Q9UGK3 403 aa10.06□□□□□ -0.8
UBR4-202ENST00000375224 KDM6AO15550 1401 aaPredicted RBP10.06□□□□□ -0.8
UBR4-202ENST00000375224 MRC1P22897 1456 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 MX1P20591 662 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 PPP1R42Q7Z4L9 355 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 MAP3K2Q9Y2U5 619 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 PRDM11Q9NQV5 511 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
UBR4-202ENST00000375224 CHMP5Q9NZZ3 219 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 SALL3Q9BXA9 1300 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
UBR4-202ENST00000375224 WDR17Q8IZU2 1322 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 SRGAP3O43295 1099 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 MTX1Q13505 466 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 RABEP1Q15276 862 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 NFATC2IPQ8NCF5 419 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 PARP4Q9UKK3 1724 aaKnown RBP10.04□□□□□ -0.8
UBR4-202ENST00000375224 ERC2O15083 957 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 SURF6O75683 361 aaKnown RBP10.04□□□□□ -0.8
UBR4-202ENST00000375224 SNRPA1P09661 255 aaKnown RBP10.04□□□□□ -0.8
UBR4-202ENST00000375224 LARP1Q6PKG0 1096 aaKnown RBP10.04□□□□□ -0.8
UBR4-202ENST00000375224 FMNL2Q96PY5 1086 aa10.04□□□□□ -0.8
UBR4-202ENST00000375224 KDM4FA0A1W2PPD8 638 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 ANXA1P04083 346 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 NBPF7P0C2Y1 421 aaPredicted RBP10.03□□□□□ -0.8
UBR4-202ENST00000375224 CABP4P57796 275 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 NEXNQ0ZGT2 675 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 USP26Q9BXU7 913 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 CYP27B1O15528 508 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 ERC1Q8IUD2 1116 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 KIF2CQ99661 725 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
UBR4-202ENST00000375224 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
UBR4-202ENST00000375224 FRAT2O75474 233 aaPredicted RBP10.02□□□□□ -0.8
UBR4-202ENST00000375224 TOM1L2Q6ZVM7 507 aa10.02□□□□□ -0.8
UBR4-202ENST00000375224 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.8
UBR4-202ENST00000375224 RHPN1Q8TCX5 695 aa10.02□□□□□ -0.8
UBR4-202ENST00000375224 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.8
UBR4-202ENST00000375224 SLC39A6Q13433 755 aa10.02□□□□□ -0.81
UBR4-202ENST00000375224 PROSER3Q2NL68 480 aa10.02□□□□□ -0.81
UBR4-202ENST00000375224 ZCRB1Q8TBF4 217 aaKnown RBP10.02□□□□□ -0.81
UBR4-202ENST00000375224 UTYO14607 1347 aa10.02□□□□□ -0.81
UBR4-202ENST00000375224 PDIA6Q15084 440 aa10.02□□□□□ -0.81
UBR4-202ENST00000375224 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
UBR4-202ENST00000375224 GRM8O00222 908 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 EPB41L2O43491 1005 aaKnown RBP10.01□□□□□ -0.81
UBR4-202ENST00000375224 CARD10Q9BWT7 1032 aa10.01□□□□□ -0.81
UBR4-202ENST00000375224 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms