RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 IPO8O15397 1037 aaKnown RBP19.64■□□□□ 0.73
CCDC40-202ENST00000374876 TEFQ10587 303 aa19.63■□□□□ 0.73
CCDC40-202ENST00000374876 ALDH1L2Q3SY69 923 aa19.63■□□□□ 0.73
CCDC40-202ENST00000374876 ITPRIPQ8IWB1 547 aa19.63■□□□□ 0.73
CCDC40-202ENST00000374876 HTATSF1O43719 755 aaKnown RBP19.63■□□□□ 0.73
CCDC40-202ENST00000374876 SLC39A6Q13433 755 aa19.63■□□□□ 0.73
CCDC40-202ENST00000374876 DAXXQ9UER7 740 aaPredicted RBP19.63■□□□□ 0.73
CCDC40-202ENST00000374876 CEMIPQ8WUJ3 1361 aa19.62■□□□□ 0.73
CCDC40-202ENST00000374876 RTL5Q5HYW3 569 aaPredicted RBP19.62■□□□□ 0.73
CCDC40-202ENST00000374876 PALLDQ8WX93 1383 aa19.62■□□□□ 0.73
CCDC40-202ENST00000374876 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
CCDC40-202ENST00000374876 ZNF428Q96B54 188 aa19.61■□□□□ 0.73
CCDC40-202ENST00000374876 LRRC4BQ9NT99 713 aa19.61■□□□□ 0.73
CCDC40-202ENST00000374876 PDZRN3Q9UPQ7 1066 aa19.61■□□□□ 0.73
CCDC40-202ENST00000374876 GNAI1P63096 354 aa19.6■□□□□ 0.73
CCDC40-202ENST00000374876 LMOD3Q0VAK6 560 aa19.6■□□□□ 0.73
CCDC40-202ENST00000374876 SMARCC1Q92922 1105 aaPredicted RBP19.6■□□□□ 0.73
CCDC40-202ENST00000374876 PTCD1O75127 700 aaKnown RBP19.59■□□□□ 0.73
CCDC40-202ENST00000374876 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
CCDC40-202ENST00000374876 IFT57Q9NWB7 429 aa19.59■□□□□ 0.73
CCDC40-202ENST00000374876 MIS18AQ9NYP9 233 aa19.59■□□□□ 0.73
CCDC40-202ENST00000374876 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
CCDC40-202ENST00000374876 MRC1P22897 1456 aa19.58■□□□□ 0.73
CCDC40-202ENST00000374876 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.73
CCDC40-202ENST00000374876 BTBD11A6QL63 1104 aa19.58■□□□□ 0.72
CCDC40-202ENST00000374876 LOC102724428A0A0B4J2F2 783 aa19.57■□□□□ 0.72
CCDC40-202ENST00000374876 SIK1P57059 783 aa19.57■□□□□ 0.72
CCDC40-202ENST00000374876 KCNQ3O43525 872 aa19.56■□□□□ 0.72
CCDC40-202ENST00000374876 HDAC1Q13547 482 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-202ENST00000374876 SLC27A3Q5K4L6 730 aa19.56■□□□□ 0.72
CCDC40-202ENST00000374876 SLC4A9Q96Q91 983 aa19.56■□□□□ 0.72
CCDC40-202ENST00000374876 LY75O60449 1722 aa19.56■□□□□ 0.72
CCDC40-202ENST00000374876 ATP6V1AP38606 617 aa19.56■□□□□ 0.72
CCDC40-202ENST00000374876 BRPF1P55201 1214 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-202ENST00000374876 TAF7Q15545 349 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-202ENST00000374876 RGPD3A6NKT7 1758 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-202ENST00000374876 RGPD4Q7Z3J3 1758 aa19.56■□□□□ 0.72
CCDC40-202ENST00000374876 RREB1Q92766 1687 aa19.55■□□□□ 0.72
CCDC40-202ENST00000374876 VAMP4O75379 141 aa19.54■□□□□ 0.72
CCDC40-202ENST00000374876 ZNF853P0CG23 659 aa19.54■□□□□ 0.72
CCDC40-202ENST00000374876 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
CCDC40-202ENST00000374876 MBIPQ9NS73 344 aa19.54■□□□□ 0.72
CCDC40-202ENST00000374876 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
CCDC40-202ENST00000374876 TTC5Q8N0Z6 440 aa19.54■□□□□ 0.72
CCDC40-202ENST00000374876 ANO8Q9HCE9 1232 aaPredicted RBP19.54■□□□□ 0.72
CCDC40-202ENST00000374876 ZBTB40Q9NUA8 1239 aa19.54■□□□□ 0.72
CCDC40-202ENST00000374876 NUP188Q5SRE5 1749 aa19.53■□□□□ 0.72
CCDC40-202ENST00000374876 SLC4A3P48751 1232 aa19.53■□□□□ 0.72
CCDC40-202ENST00000374876 ITPK1Q13572 414 aa19.53■□□□□ 0.72
CCDC40-202ENST00000374876 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
CCDC40-202ENST00000374876 NBPF14Q5TI25 921 aa19.52■□□□□ 0.72
CCDC40-202ENST00000374876 ZNF496Q96IT1 587 aaPredicted RBP19.52■□□□□ 0.72
CCDC40-202ENST00000374876 PSDA5PKW4 1024 aaPredicted RBP19.51■□□□□ 0.71
CCDC40-202ENST00000374876 MRPL50Q8N5N7 158 aaKnown RBP19.51■□□□□ 0.71
CCDC40-202ENST00000374876 TSPYL6Q8N831 410 aa19.51■□□□□ 0.71
CCDC40-202ENST00000374876 SEC24BO95487 1268 aa19.51■□□□□ 0.71
CCDC40-202ENST00000374876 DEKP35659 375 aaKnown RBP19.51■□□□□ 0.71
CCDC40-202ENST00000374876 R3HDM1Q15032 1099 aaKnown RBP19.51■□□□□ 0.71
CCDC40-202ENST00000374876 ARHGAP45Q92619 1136 aa19.51■□□□□ 0.71
CCDC40-202ENST00000374876 ELL2O00472 640 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-202ENST00000374876 ZNF827Q17R98 1081 aa19.5■□□□□ 0.71
CCDC40-202ENST00000374876 TWISTNBQ3B726 338 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-202ENST00000374876 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
CCDC40-202ENST00000374876 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
CCDC40-202ENST00000374876 UPF2Q9HAU5 1272 aaKnown RBP19.49■□□□□ 0.71
CCDC40-202ENST00000374876 PAPPAQ13219 1627 aa19.49■□□□□ 0.71
CCDC40-202ENST00000374876 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
CCDC40-202ENST00000374876 SLC15A2Q16348 729 aa19.48■□□□□ 0.71
CCDC40-202ENST00000374876 DNAJC10Q8IXB1 793 aa19.48■□□□□ 0.71
CCDC40-202ENST00000374876 SMC5Q8IY18 1101 aa19.48■□□□□ 0.71
CCDC40-202ENST00000374876 STK32BQ9NY57 414 aa19.48■□□□□ 0.71
CCDC40-202ENST00000374876 AKT1S1Q96B36 256 aa19.47■□□□□ 0.71
CCDC40-202ENST00000374876 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
CCDC40-202ENST00000374876 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
CCDC40-202ENST00000374876 FMNL2Q96PY5 1086 aa19.47■□□□□ 0.71
CCDC40-202ENST00000374876 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
CCDC40-202ENST00000374876 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
CCDC40-202ENST00000374876 TAF1LQ8IZX4 1826 aa19.46■□□□□ 0.71
CCDC40-202ENST00000374876 TFCP2L1Q9NZI6 479 aa19.46■□□□□ 0.71
CCDC40-202ENST00000374876 C5P01031 1676 aa19.45■□□□□ 0.7
CCDC40-202ENST00000374876 CHL1O00533 1208 aa19.45■□□□□ 0.7
CCDC40-202ENST00000374876 PDGFDQ9GZP0 370 aaPredicted RBP19.45■□□□□ 0.7
CCDC40-202ENST00000374876 HEG1Q9ULI3 1381 aa19.45■□□□□ 0.7
CCDC40-202ENST00000374876 UBR2Q8IWV8 1755 aa19.45■□□□□ 0.7
CCDC40-202ENST00000374876 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-202ENST00000374876 EIF4A1P60842 406 aaKnown RBP19.44■□□□□ 0.7
CCDC40-202ENST00000374876 VSIG10Q8N0Z9 540 aa19.44■□□□□ 0.7
CCDC40-202ENST00000374876 AMIGO3Q86WK7 504 aa19.43■□□□□ 0.7
CCDC40-202ENST00000374876 AK7Q96M32 723 aa19.43■□□□□ 0.7
CCDC40-202ENST00000374876 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
CCDC40-202ENST00000374876 ABCC4O15439 1325 aa19.42■□□□□ 0.7
CCDC40-202ENST00000374876 API5Q9BZZ5 524 aaKnown RBP19.42■□□□□ 0.7
CCDC40-202ENST00000374876 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
CCDC40-202ENST00000374876 C4BP0C0L5 1744 aa19.42■□□□□ 0.7
CCDC40-202ENST00000374876 CYP19A1P11511 503 aaPredicted RBP19.42■□□□□ 0.7
CCDC40-202ENST00000374876 CRKLP46109 303 aaKnown RBP19.42■□□□□ 0.7
CCDC40-202ENST00000374876 BECN1Q14457 450 aa19.42■□□□□ 0.7
CCDC40-202ENST00000374876 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
CCDC40-202ENST00000374876 TJP1Q07157 1748 aa19.42■□□□□ 0.7
CCDC40-202ENST00000374876 GNPATO15228 680 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms