RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 CNPY2Q9Y2B0 182 aa16.05■□□□□ 0.16
SNX12-202ENST00000374274 AOX1Q06278 1338 aa16.05■□□□□ 0.16
SNX12-202ENST00000374274 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
SNX12-202ENST00000374274 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
SNX12-202ENST00000374274 CHMLP26374 656 aa16.04■□□□□ 0.16
SNX12-202ENST00000374274 TERF2Q15554 542 aa16.04■□□□□ 0.16
SNX12-202ENST00000374274 KRT222Q8N1A0 295 aa16.04■□□□□ 0.16
SNX12-202ENST00000374274 FAM200AQ8TCP9 573 aa16.04■□□□□ 0.16
SNX12-202ENST00000374274 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
SNX12-202ENST00000374274 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
SNX12-202ENST00000374274 SLIT1O75093 1534 aa16.03■□□□□ 0.16
SNX12-202ENST00000374274 AP5Z1O43299 807 aa16.03■□□□□ 0.16
SNX12-202ENST00000374274 F13A1P00488 732 aa16.03■□□□□ 0.16
SNX12-202ENST00000374274 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
SNX12-202ENST00000374274 FAM53CQ9NYF3 392 aa16.03■□□□□ 0.16
SNX12-202ENST00000374274 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
SNX12-202ENST00000374274 STX6O43752 255 aa16.02■□□□□ 0.16
SNX12-202ENST00000374274 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
SNX12-202ENST00000374274 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
SNX12-202ENST00000374274 ARHGAP23Q9P227 1491 aa16.02■□□□□ 0.16
SNX12-202ENST00000374274 TCHHQ07283 1943 aa16.02■□□□□ 0.16
SNX12-202ENST00000374274 HSPA4P34932 840 aa16.02■□□□□ 0.15
SNX12-202ENST00000374274 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.15
SNX12-202ENST00000374274 ROBO2Q9HCK4 1378 aa16.02■□□□□ 0.15
SNX12-202ENST00000374274 SLFNL1Q499Z3 407 aa16.01■□□□□ 0.15
SNX12-202ENST00000374274 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
SNX12-202ENST00000374274 ANO2Q9NQ90 1003 aa16.01■□□□□ 0.15
SNX12-202ENST00000374274 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
SNX12-202ENST00000374274 ZNF397Q8NF99 534 aaPredicted RBP16.01■□□□□ 0.15
SNX12-202ENST00000374274 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
SNX12-202ENST00000374274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16■□□□□ 0.15
SNX12-202ENST00000374274 TIGD1Q96MW7 591 aa16■□□□□ 0.15
SNX12-202ENST00000374274 CALCOCO1Q9P1Z2 691 aa16■□□□□ 0.15
SNX12-202ENST00000374274 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
SNX12-202ENST00000374274 IL13P35225 146 aa16■□□□□ 0.15
SNX12-202ENST00000374274 GIMAP6Q6P9H5 292 aa16■□□□□ 0.15
SNX12-202ENST00000374274 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
SNX12-202ENST00000374274 CCDC61Q9Y6R9 512 aa16■□□□□ 0.15
SNX12-202ENST00000374274 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 TNNT1P13805 278 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 MEIS3Q99687 375 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 TSPYL1Q9H0U9 437 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
SNX12-202ENST00000374274 SYT1P21579 422 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 PTGS1P23219 599 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 PLCB2Q00722 1185 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
SNX12-202ENST00000374274 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 MON2Q7Z3U7 1717 aa15.99■□□□□ 0.15
SNX12-202ENST00000374274 THEMISQ8N1K5 641 aaPredicted RBP15.98■□□□□ 0.15
SNX12-202ENST00000374274 SPC24Q8NBT2 197 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 TTC14Q96N46 770 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
SNX12-202ENST00000374274 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.98■□□□□ 0.15
SNX12-202ENST00000374274 CDC25BP30305 580 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
SNX12-202ENST00000374274 RNF20Q5VTR2 975 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 LRRCC1Q9C099 1032 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 LIMCH1Q9UPQ0 1083 aa15.98■□□□□ 0.15
SNX12-202ENST00000374274 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 ELP1O95163 1332 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 NEMFO60524 1076 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 FOXD4L6Q3SYB3 417 aaPredicted RBP15.97■□□□□ 0.15
SNX12-202ENST00000374274 FOXD4L3Q6VB84 417 aaPredicted RBP15.97■□□□□ 0.15
SNX12-202ENST00000374274 PLA2G4DQ86XP0 818 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 UPF3BQ9BZI7 483 aaKnown RBP15.97■□□□□ 0.15
SNX12-202ENST00000374274 IGSF3O75054 1194 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 CAVIN2O95810 425 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 HMOX1P09601 288 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
SNX12-202ENST00000374274 MAP3K11Q16584 847 aa15.97■□□□□ 0.15
SNX12-202ENST00000374274 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
SNX12-202ENST00000374274 APBB1O00213 710 aa15.96■□□□□ 0.15
SNX12-202ENST00000374274 FIBPO43427 364 aa15.96■□□□□ 0.15
SNX12-202ENST00000374274 ZSCAN25Q6NSZ9 544 aa15.96■□□□□ 0.15
SNX12-202ENST00000374274 NOL8Q76FK4 1167 aaKnown RBP15.96■□□□□ 0.15
SNX12-202ENST00000374274 SMC3Q9UQE7 1217 aa15.96■□□□□ 0.15
SNX12-202ENST00000374274 RAD50Q92878 1312 aa15.96■□□□□ 0.15
SNX12-202ENST00000374274 TULP2O00295 520 aa15.95■□□□□ 0.14
SNX12-202ENST00000374274 CCDC186Q7Z3E2 898 aa15.95■□□□□ 0.14
SNX12-202ENST00000374274 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
SNX12-202ENST00000374274 C16orf45Q96MC5 204 aaPredicted RBP15.95■□□□□ 0.14
SNX12-202ENST00000374274 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
SNX12-202ENST00000374274 DIP2AQ14689 1571 aa15.95■□□□□ 0.14
SNX12-202ENST00000374274 NCKAP5LQ9HCH0 1330 aa15.95■□□□□ 0.14
SNX12-202ENST00000374274 TDRD7Q8NHU6 1098 aaKnown RBP15.95■□□□□ 0.14
SNX12-202ENST00000374274 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
SNX12-202ENST00000374274 CHL1O00533 1208 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 ZNF75DP51815 510 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 RBM43Q6ZSC3 357 aaKnown RBP15.94■□□□□ 0.14
SNX12-202ENST00000374274 ERO1AQ96HE7 468 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 MRVI1Q9Y6F6 885 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 GNAI2P04899 355 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 KCNJ4P48050 445 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 TYRO3Q06418 890 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 NUP62CLQ9H1M0 184 aa15.94■□□□□ 0.14
SNX12-202ENST00000374274 KCND1Q9NSA2 647 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms