RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ALS2Q96Q42 1657 aa19.64■□□□□ 0.74
CNKSR1-202ENST00000374253 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.74
CNKSR1-202ENST00000374253 GZF1Q9H116 711 aaPredicted RBP19.64■□□□□ 0.74
CNKSR1-202ENST00000374253 DNAJC5Q9H3Z4 198 aa19.64■□□□□ 0.74
CNKSR1-202ENST00000374253 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
CNKSR1-202ENST00000374253 MEGF6O75095 1541 aa19.64■□□□□ 0.73
CNKSR1-202ENST00000374253 C9orf78Q9NZ63 289 aaPredicted RBP19.63■□□□□ 0.73
CNKSR1-202ENST00000374253 NCOA3Q9Y6Q9 1424 aa19.63■□□□□ 0.73
CNKSR1-202ENST00000374253 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
CNKSR1-202ENST00000374253 ERC2O15083 957 aa19.63■□□□□ 0.73
CNKSR1-202ENST00000374253 PHKG2P15735 406 aa19.62■□□□□ 0.73
CNKSR1-202ENST00000374253 DDIT3P35638 169 aa19.62■□□□□ 0.73
CNKSR1-202ENST00000374253 ZNF790Q6PG37 636 aa19.62■□□□□ 0.73
CNKSR1-202ENST00000374253 KDM6AO15550 1401 aaPredicted RBP19.62■□□□□ 0.73
CNKSR1-202ENST00000374253 POLA2Q14181 598 aa19.61■□□□□ 0.73
CNKSR1-202ENST00000374253 RHPN1Q8TCX5 695 aa19.61■□□□□ 0.73
CNKSR1-202ENST00000374253 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
CNKSR1-202ENST00000374253 SLC52A2Q9HAB3 445 aa19.61■□□□□ 0.73
CNKSR1-202ENST00000374253 REC8O95072 547 aa19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 OS9Q13438 667 aaPredicted RBP19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 RABEP1Q15276 862 aa19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 KSR2Q6VAB6 950 aa19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 TNPO1Q92973 898 aaKnown RBP19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 BRPF3Q9ULD4 1205 aa19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 CYP27B1O15528 508 aa19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
CNKSR1-202ENST00000374253 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 IL25Q9H293 177 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 HEG1Q9ULI3 1381 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 PDIA6Q15084 440 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 ANO2Q9NQ90 1003 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 TNS3Q68CZ2 1445 aa19.59■□□□□ 0.73
CNKSR1-202ENST00000374253 CAMTA1Q9Y6Y1 1673 aa19.58■□□□□ 0.73
CNKSR1-202ENST00000374253 JARID2Q92833 1246 aaPredicted RBP19.58■□□□□ 0.73
CNKSR1-202ENST00000374253 ESYT1Q9BSJ8 1104 aa19.58■□□□□ 0.73
CNKSR1-202ENST00000374253 SPATA31A3Q5VYP0 1347 aa19.58■□□□□ 0.73
CNKSR1-202ENST00000374253 CHMLP26374 656 aa19.58■□□□□ 0.72
CNKSR1-202ENST00000374253 BRINP3Q76B58 766 aa19.58■□□□□ 0.72
CNKSR1-202ENST00000374253 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 DDX21Q9NR30 783 aaKnown RBP eCLIP19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 HYPKQ9NX55 129 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 STAP2Q9UGK3 403 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 PALD1Q9ULE6 856 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
CNKSR1-202ENST00000374253 RIC3Q7Z5B4 369 aa19.56■□□□□ 0.72
CNKSR1-202ENST00000374253 SSFA2P28290 1259 aa19.56■□□□□ 0.72
CNKSR1-202ENST00000374253 XAGE3Q8WTP9 111 aa19.56■□□□□ 0.72
CNKSR1-202ENST00000374253 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 NOL8Q76FK4 1167 aaKnown RBP19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 KIF1BPQ96EK5 621 aa19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 COPS6Q7L5N1 327 aa19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 SIPA1L3O60292 1781 aaPredicted RBP19.55■□□□□ 0.72
CNKSR1-202ENST00000374253 PI4K2BQ8TCG2 481 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 TRAK2O60296 914 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 RAB3GAP1Q15042 981 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 TTC5Q8N0Z6 440 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 KLHDC4Q8TBB5 520 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 DCCP43146 1447 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 COL18A1P39060 1754 aa19.54■□□□□ 0.72
CNKSR1-202ENST00000374253 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 IGKV5-2P06315 115 aa19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 SIL1Q9H173 461 aa19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 BICC1Q9H694 974 aaKnown RBP19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 RTN4Q9NQC3 1192 aaKnown RBP19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 GRM8O00222 908 aa19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 ALDH1L1O75891 902 aa19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 ZGPATQ8N5A5 531 aaKnown RBP19.53■□□□□ 0.72
CNKSR1-202ENST00000374253 EIF5BO60841 1220 aaKnown RBP19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 NEK4P51957 841 aa19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 PKP1Q13835 747 aa19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 MYD88Q99836 296 aa19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 C5P01031 1676 aa19.52■□□□□ 0.72
CNKSR1-202ENST00000374253 TOM1L2Q6ZVM7 507 aa19.52■□□□□ 0.71
CNKSR1-202ENST00000374253 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.71
CNKSR1-202ENST00000374253 ST18O60284 1047 aa19.51■□□□□ 0.71
CNKSR1-202ENST00000374253 CABP4P57796 275 aa19.51■□□□□ 0.71
CNKSR1-202ENST00000374253 DCAF5Q96JK2 942 aa19.51■□□□□ 0.71
CNKSR1-202ENST00000374253 CIZ1Q9ULV3 898 aaPredicted RBP19.51■□□□□ 0.71
CNKSR1-202ENST00000374253 SCN11AQ9UI33 1791 aa19.5■□□□□ 0.71
CNKSR1-202ENST00000374253 STRN4Q9NRL3 753 aa19.5■□□□□ 0.71
CNKSR1-202ENST00000374253 UPF3BQ9BZI7 483 aaKnown RBP19.5■□□□□ 0.71
CNKSR1-202ENST00000374253 ATP5J2-PTCD1G3V325 749 aa19.49■□□□□ 0.71
CNKSR1-202ENST00000374253 PTCD1O75127 700 aaKnown RBP19.49■□□□□ 0.71
CNKSR1-202ENST00000374253 SLAIN2Q9P270 581 aa19.49■□□□□ 0.71
CNKSR1-202ENST00000374253 CRYBG1Q9Y4K1 1723 aa19.49■□□□□ 0.71
CNKSR1-202ENST00000374253 ADAMTS7Q9UKP4 1686 aa19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 EPHA10Q5JZY3 1008 aa19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 CWC27Q6UX04 472 aaKnown RBP19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 CLASRPQ8N2M8 674 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms