RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 SCAF11Q99590 1463 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 KIF5BP33176 963 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC96Q2M329 555 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 SEPT11Q9NVA2 429 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 ZNF213O14771 459 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 BAG4O95429 457 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC178Q5BJE1 867 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 FKBP15Q5T1M5 1219 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 GSTO1P78417 241 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 IDI1Q13907 227 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 TNRQ92752 1358 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 EPB41L2O43491 1005 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 MAP3K1Q13233 1512 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 KIF2AO00139 706 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC150Q8NCX0 1101 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 SLC12A7Q9Y666 1083 aa12.93□□□□□ -0.34
PHACTR4-202ENST00000373839 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 BACH2Q9BYV9 841 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 PIK3R4Q99570 1358 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 ST5P78524 1137 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 PDE4BQ07343 736 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 STXBP4Q6ZWJ1 553 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 MYO1BO43795 1136 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC112Q8NEF3 446 aa12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 C14orf93Q9H972 538 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-202ENST00000373839 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 C8orf76Q96K31 380 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 FANCAO15360 1455 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 IL16Q14005 1332 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 CETN1Q12798 172 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 LEKR1Q6ZMV7 388 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 ABCC5O15440 1437 aa12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
PHACTR4-202ENST00000373839 CTAGE5O15320 804 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 RANBP6O60518 1105 aaKnown RBP12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC66A2RUB6 948 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 FLIIQ13045 1269 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 ARHGAP29Q52LW3 1261 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 ANO10Q9NW15 660 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 ECHDC1Q9NTX5 307 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 FEZ1Q99689 392 aa12.9□□□□□ -0.34
PHACTR4-202ENST00000373839 RFC4P35249 363 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 AMPD3Q01432 767 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 KIAA1328Q86T90 577 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 SSRP1Q08945 709 aaKnown RBP12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 SPA17Q15506 151 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 GBP3Q9H0R5 595 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
PHACTR4-202ENST00000373839 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 HMG20BQ9P0W2 317 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 CFAP100Q494V2 611 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
PHACTR4-202ENST00000373839 NOS1P29475 1434 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 ANKRD62A6NC57 917 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 ADGRF5Q8IZF2 1346 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 NLRP5P59047 1200 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 CRNKL1Q9BZJ0 848 aaKnown RBP12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 FBXO31Q5XUX0 539 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 PIBF1Q8WXW3 757 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms