RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ATP8B2P98198 1209 aa31.09■■■□□ 2.57
CTSA-203ENST00000372459 NKX1-1Q15270 411 aaPredicted RBP31.09■■■□□ 2.57
CTSA-203ENST00000372459 BTG4Q9NY30 223 aa31.09■■■□□ 2.57
CTSA-203ENST00000372459 SNRPA1P09661 255 aaKnown RBP31.08■■■□□ 2.57
CTSA-203ENST00000372459 KSR2Q6VAB6 950 aa31.08■■■□□ 2.57
CTSA-203ENST00000372459 LRRFIP2Q9Y608 721 aaKnown RBP31.08■■■□□ 2.57
CTSA-203ENST00000372459 ERVV-2B6SEH9 535 aa31.08■■■□□ 2.57
CTSA-203ENST00000372459 DDX58O95786 925 aaKnown RBP31.06■■■□□ 2.56
CTSA-203ENST00000372459 PDIA6Q15084 440 aa31.06■■■□□ 2.56
CTSA-203ENST00000372459 MAP3K2Q9Y2U5 619 aa31.06■■■□□ 2.56
CTSA-203ENST00000372459 SHANK3Q9BYB0 1731 aa31.05■■■□□ 2.56
CTSA-203ENST00000372459 PLEKHM2Q8IWE5 1019 aa31.04■■■□□ 2.56
CTSA-203ENST00000372459 DDX54Q8TDD1 881 aaKnown RBP31.04■■■□□ 2.56
CTSA-203ENST00000372459 ALDH1L1O75891 902 aa31.03■■■□□ 2.56
CTSA-203ENST00000372459 PNMA6EA0A0J9YXQ4 647 aa31.03■■■□□ 2.56
CTSA-203ENST00000372459 USP35Q9P2H5 1018 aa31.02■■■□□ 2.56
CTSA-203ENST00000372459 APBB1O00213 710 aa31.01■■■□□ 2.55
CTSA-203ENST00000372459 TBC1D32Q96NH3 1257 aa31■■■□□ 2.55
CTSA-203ENST00000372459 USP16Q9Y5T5 823 aa31■■■□□ 2.55
CTSA-203ENST00000372459 COL16A1Q07092 1604 aaPredicted RBP31■■■□□ 2.55
CTSA-203ENST00000372459 SMARCA5O60264 1052 aaPredicted RBP30.99■■■□□ 2.55
CTSA-203ENST00000372459 AIMP1Q12904 312 aaKnown RBP30.99■■■□□ 2.55
CTSA-203ENST00000372459 NBPF7P0C2Y1 421 aaPredicted RBP30.99■■■□□ 2.55
CTSA-203ENST00000372459 C16orf71Q8IYS4 520 aaPredicted RBP30.99■■■□□ 2.55
CTSA-203ENST00000372459 MYL6BP14649 208 aa30.98■■■□□ 2.55
CTSA-203ENST00000372459 EXOC6BQ9Y2D4 811 aa30.98■■■□□ 2.55
CTSA-203ENST00000372459 PHLPP1O60346 1717 aa30.98■■■□□ 2.55
CTSA-203ENST00000372459 LAMB4A4D0S4 1761 aa30.97■■■□□ 2.55
CTSA-203ENST00000372459 LINS1Q8NG48 757 aa30.97■■■□□ 2.55
CTSA-203ENST00000372459 SSH3Q8TE77 659 aa30.97■■■□□ 2.55
CTSA-203ENST00000372459 HDAC5Q9UQL6 1122 aa30.97■■■□□ 2.55
CTSA-203ENST00000372459 GLI3P10071 1580 aa30.96■■■□□ 2.55
CTSA-203ENST00000372459 MFAP1P55081 439 aaKnown RBP30.96■■■□□ 2.55
CTSA-203ENST00000372459 TTC22Q5TAA0 569 aa30.96■■■□□ 2.55
CTSA-203ENST00000372459 RIC3Q7Z5B4 369 aa30.96■■■□□ 2.55
CTSA-203ENST00000372459 BCL11AQ9H165 835 aa30.96■■■□□ 2.55
CTSA-203ENST00000372459 UBR2Q8IWV8 1755 aa30.95■■■□□ 2.54
CTSA-203ENST00000372459 XAGE3Q8WTP9 111 aa30.95■■■□□ 2.54
CTSA-203ENST00000372459 LRRCC1Q9C099 1032 aa30.95■■■□□ 2.54
CTSA-203ENST00000372459 C9orf78Q9NZ63 289 aaPredicted RBP30.95■■■□□ 2.54
CTSA-203ENST00000372459 IBTKQ9P2D0 1353 aaPredicted RBP30.95■■■□□ 2.54
CTSA-203ENST00000372459 DAXXQ9UER7 740 aaPredicted RBP30.95■■■□□ 2.54
CTSA-203ENST00000372459 PAPPAQ13219 1627 aa30.94■■■□□ 2.54
CTSA-203ENST00000372459 PPP1R42Q7Z4L9 355 aa30.94■■■□□ 2.54
CTSA-203ENST00000372459 POLA2Q14181 598 aa30.94■■■□□ 2.54
CTSA-203ENST00000372459 NBR1Q14596 966 aa30.94■■■□□ 2.54
CTSA-203ENST00000372459 COPS6Q7L5N1 327 aa30.94■■■□□ 2.54
CTSA-203ENST00000372459 GSPT1P15170 499 aaKnown RBP30.93■■■□□ 2.54
CTSA-203ENST00000372459 DISP2A7MBM2 1401 aa30.93■■■□□ 2.54
CTSA-203ENST00000372459 LRP10Q7Z4F1 713 aa30.92■■■□□ 2.54
CTSA-203ENST00000372459 OTUD7AQ8TE49 926 aaPredicted RBP30.92■■■□□ 2.54
CTSA-203ENST00000372459 ERBB4Q15303 1308 aa30.92■■■□□ 2.54
CTSA-203ENST00000372459 TOM1O60784 492 aa30.92■■■□□ 2.54
CTSA-203ENST00000372459 CWF19L2Q2TBE0 894 aaKnown RBP30.92■■■□□ 2.54
CTSA-203ENST00000372459 NEXNQ0ZGT2 675 aa30.91■■■□□ 2.54
CTSA-203ENST00000372459 KCPQ6ZWJ8 1503 aa30.91■■■□□ 2.54
CTSA-203ENST00000372459 PLCH1Q4KWH8 1693 aa30.9■■■□□ 2.54
CTSA-203ENST00000372459 SRGAP3O43295 1099 aa30.9■■■□□ 2.54
CTSA-203ENST00000372459 C22orf23Q9BZE7 217 aa30.9■■■□□ 2.54
CTSA-203ENST00000372459 TOGARAM1Q9Y4F4 1720 aa30.89■■■□□ 2.54
CTSA-203ENST00000372459 TMOD3Q9NYL9 352 aa30.89■■■□□ 2.54
CTSA-203ENST00000372459 TNS2Q63HR2 1409 aa30.89■■■□□ 2.53
CTSA-203ENST00000372459 CDC45O75419 566 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 ANKRD13DQ6ZTN6 518 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 OSBPL3Q9H4L5 887 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 UTYO14607 1347 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 GRM8O00222 908 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 RAB11FIP3O75154 756 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 TBC1D9Q6ZT07 1266 aa30.88■■■□□ 2.53
CTSA-203ENST00000372459 METTL22Q9BUU2 404 aaPredicted RBP30.88■■■□□ 2.53
CTSA-203ENST00000372459 MTX1Q13505 466 aa30.87■■■□□ 2.53
CTSA-203ENST00000372459 DEKP35659 375 aaKnown RBP30.86■■■□□ 2.53
CTSA-203ENST00000372459 RTL5Q5HYW3 569 aaPredicted RBP30.86■■■□□ 2.53
CTSA-203ENST00000372459 EIF5BO60841 1220 aaKnown RBP30.85■■■□□ 2.53
CTSA-203ENST00000372459 SURF6O75683 361 aaKnown RBP30.85■■■□□ 2.53
CTSA-203ENST00000372459 IGKV5-2P06315 115 aa30.85■■■□□ 2.53
CTSA-203ENST00000372459 PIP4K2AP48426 406 aaPredicted RBP30.85■■■□□ 2.53
CTSA-203ENST00000372459 PDE1AP54750 535 aa30.85■■■□□ 2.53
CTSA-203ENST00000372459 PIP4K2BP78356 416 aa30.84■■■□□ 2.53
CTSA-203ENST00000372459 NEURL1BA8MQ27 555 aa30.83■■■□□ 2.53
CTSA-203ENST00000372459 PTCD1O75127 700 aaKnown RBP30.83■■■□□ 2.53
CTSA-203ENST00000372459 ADAMTS2O95450 1211 aa30.83■■■□□ 2.53
CTSA-203ENST00000372459 HSP90AB4PQ58FF6 505 aa30.83■■■□□ 2.53
CTSA-203ENST00000372459 MYD88Q99836 296 aa30.83■■■□□ 2.53
CTSA-203ENST00000372459 BECN1Q14457 450 aa30.83■■■□□ 2.53
CTSA-203ENST00000372459 SALL3Q9BXA9 1300 aa30.82■■■□□ 2.53
CTSA-203ENST00000372459 EXOC5O00471 708 aa30.82■■■□□ 2.52
CTSA-203ENST00000372459 SLC4A3P48751 1232 aa30.82■■■□□ 2.52
CTSA-203ENST00000372459 WNK3Q9BYP7 1800 aa30.82■■■□□ 2.52
CTSA-203ENST00000372459 PLBD2Q8NHP8 589 aa30.81■■■□□ 2.52
CTSA-203ENST00000372459 SDSP20132 328 aa30.8■■■□□ 2.52
CTSA-203ENST00000372459 MX1P20591 662 aa30.8■■■□□ 2.52
CTSA-203ENST00000372459 GCKRQ14397 625 aa30.8■■■□□ 2.52
CTSA-203ENST00000372459 NBPF26B4DH59 902 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 NBPF14Q5TI25 921 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 NBPF10Q6P3W6 841 aaKnown RBP30.79■■■□□ 2.52
CTSA-203ENST00000372459 NBPF15Q8N660 670 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 KIF1BPQ96EK5 621 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 SUCLG2Q96I99 432 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 CDCA7Q9BWT1 371 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms