RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
YIPF3-201ENST00000372417 ANKRD26Q9UPS8 1709 aa11.27□□□□□ -0.61
YIPF3-201ENST00000372417 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
YIPF3-201ENST00000372417 DDNO94850 711 aaPredicted RBP11.27□□□□□ -0.61
YIPF3-201ENST00000372417 FBLN1P23142 703 aa11.27□□□□□ -0.61
YIPF3-201ENST00000372417 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
YIPF3-201ENST00000372417 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
YIPF3-201ENST00000372417 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
YIPF3-201ENST00000372417 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
YIPF3-201ENST00000372417 USP42Q9H9J4 1324 aaKnown RBP11.27□□□□□ -0.61
YIPF3-201ENST00000372417 DGKZQ13574 1117 aa11.26□□□□□ -0.61
YIPF3-201ENST00000372417 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
YIPF3-201ENST00000372417 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
YIPF3-201ENST00000372417 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
YIPF3-201ENST00000372417 ECE1P42892 770 aa11.25□□□□□ -0.61
YIPF3-201ENST00000372417 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
YIPF3-201ENST00000372417 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
YIPF3-201ENST00000372417 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
YIPF3-201ENST00000372417 SPG7Q9UQ90 795 aa11.25□□□□□ -0.61
YIPF3-201ENST00000372417 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
YIPF3-201ENST00000372417 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
YIPF3-201ENST00000372417 SOX10P56693 466 aa11.24□□□□□ -0.61
YIPF3-201ENST00000372417 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
YIPF3-201ENST00000372417 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
YIPF3-201ENST00000372417 SLC12A5Q9H2X9 1139 aa11.24□□□□□ -0.61
YIPF3-201ENST00000372417 INSRP06213 1382 aa11.24□□□□□ -0.61
YIPF3-201ENST00000372417 TM4SF1P30408 202 aa11.23□□□□□ -0.61
YIPF3-201ENST00000372417 GRM1Q13255 1194 aa11.23□□□□□ -0.61
YIPF3-201ENST00000372417 C2CD5Q86YS7 1000 aa11.23□□□□□ -0.61
YIPF3-201ENST00000372417 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
YIPF3-201ENST00000372417 GPR101Q96P66 508 aaPredicted RBP11.23□□□□□ -0.61
YIPF3-201ENST00000372417 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
YIPF3-201ENST00000372417 CA12O43570 354 aa11.22□□□□□ -0.61
YIPF3-201ENST00000372417 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
YIPF3-201ENST00000372417 NCAPD2Q15021 1401 aa11.22□□□□□ -0.61
YIPF3-201ENST00000372417 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
YIPF3-201ENST00000372417 LTBP3Q9NS15 1303 aa11.22□□□□□ -0.61
YIPF3-201ENST00000372417 FLT4P35916 1363 aa11.21□□□□□ -0.61
YIPF3-201ENST00000372417 H0YIN7 160 aa11.21□□□□□ -0.61
YIPF3-201ENST00000372417 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
YIPF3-201ENST00000372417 CNTROBQ8N137 903 aa11.21□□□□□ -0.61
YIPF3-201ENST00000372417 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
YIPF3-201ENST00000372417 C21orf2O43822 256 aa11.2□□□□□ -0.62
YIPF3-201ENST00000372417 ZPR1O75312 459 aa11.2□□□□□ -0.62
YIPF3-201ENST00000372417 PHKG2P15735 406 aa11.2□□□□□ -0.62
YIPF3-201ENST00000372417 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
YIPF3-201ENST00000372417 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
YIPF3-201ENST00000372417 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
YIPF3-201ENST00000372417 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
YIPF3-201ENST00000372417 HACL1Q9UJ83 578 aa11.2□□□□□ -0.62
YIPF3-201ENST00000372417 CARMIL3Q8ND23 1372 aa11.19□□□□□ -0.62
YIPF3-201ENST00000372417 EPHX2P34913 555 aa11.19□□□□□ -0.62
YIPF3-201ENST00000372417 MAP2K2P36507 400 aa11.19□□□□□ -0.62
YIPF3-201ENST00000372417 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
YIPF3-201ENST00000372417 DDX21Q9NR30 783 aaKnown RBP eCLIP11.19□□□□□ -0.62
YIPF3-201ENST00000372417 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
YIPF3-201ENST00000372417 AOC2O75106 756 aa11.18□□□□□ -0.62
YIPF3-201ENST00000372417 PNMA8AQ86V59 439 aaPredicted RBP11.18□□□□□ -0.62
YIPF3-201ENST00000372417 ZNF622Q969S3 477 aaKnown RBP eCLIP11.18□□□□□ -0.62
YIPF3-201ENST00000372417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
YIPF3-201ENST00000372417 BCORQ6W2J9 1755 aa11.18□□□□□ -0.62
YIPF3-201ENST00000372417 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
YIPF3-201ENST00000372417 SERPINB2P05120 415 aa11.17□□□□□ -0.62
YIPF3-201ENST00000372417 NFIXQ14938 502 aa11.17□□□□□ -0.62
YIPF3-201ENST00000372417 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
YIPF3-201ENST00000372417 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
YIPF3-201ENST00000372417 ZNF541Q9H0D2 1346 aa11.15□□□□□ -0.62
YIPF3-201ENST00000372417 SCN7AQ01118 1682 aa11.15□□□□□ -0.62
YIPF3-201ENST00000372417 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
YIPF3-201ENST00000372417 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
YIPF3-201ENST00000372417 PDZRN3Q9UPQ7 1066 aa11.15□□□□□ -0.62
YIPF3-201ENST00000372417 RNF123Q5XPI4 1314 aa11.14□□□□□ -0.63
YIPF3-201ENST00000372417 PTCD1O75127 700 aaKnown RBP11.14□□□□□ -0.63
YIPF3-201ENST00000372417 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
YIPF3-201ENST00000372417 SOGA3Q5TF21 947 aa11.14□□□□□ -0.63
YIPF3-201ENST00000372417 TLL2Q9Y6L7 1015 aa11.14□□□□□ -0.63
YIPF3-201ENST00000372417 PDE6BP35913 854 aa11.13□□□□□ -0.63
YIPF3-201ENST00000372417 NARFQ9UHQ1 456 aa11.13□□□□□ -0.63
YIPF3-201ENST00000372417 COL15A1P39059 1388 aa11.13□□□□□ -0.63
YIPF3-201ENST00000372417 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
YIPF3-201ENST00000372417 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
YIPF3-201ENST00000372417 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
YIPF3-201ENST00000372417 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
YIPF3-201ENST00000372417 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
YIPF3-201ENST00000372417 GGNBP2Q9H3C7 697 aa11.12□□□□□ -0.63
YIPF3-201ENST00000372417 CABP4P57796 275 aa11.11□□□□□ -0.63
YIPF3-201ENST00000372417 CST9Q5W186 159 aa11.11□□□□□ -0.63
YIPF3-201ENST00000372417 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
YIPF3-201ENST00000372417 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
YIPF3-201ENST00000372417 FYB1O15117 783 aa11.1□□□□□ -0.63
YIPF3-201ENST00000372417 PRPF40BQ6NWY9 871 aaKnown RBP11.1□□□□□ -0.63
YIPF3-201ENST00000372417 L3MBTL2Q969R5 705 aa11.1□□□□□ -0.63
YIPF3-201ENST00000372417 BRIP1Q9BX63 1249 aa11.1□□□□□ -0.63
YIPF3-201ENST00000372417 POLR2AP24928 1970 aaKnown RBP11.09□□□□□ -0.63
YIPF3-201ENST00000372417 TRAF5O00463 557 aa11.09□□□□□ -0.63
YIPF3-201ENST00000372417 BICDL1Q6ZP65 573 aa11.09□□□□□ -0.63
YIPF3-201ENST00000372417 GPC2Q8N158 579 aa11.09□□□□□ -0.63
YIPF3-201ENST00000372417 HHIPL1Q96JK4 782 aa11.09□□□□□ -0.63
YIPF3-201ENST00000372417 EYA1Q99502 592 aa11.09□□□□□ -0.63
YIPF3-201ENST00000372417 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms