RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 UPF1Q92900 1129 aaKnown RBP eCLIP26.55■■□□□ 1.845e-8■■■■■ 31.3
TSC22D3-205ENST00000372390 CCNL1Q9UK58 526 aaPredicted RBP26.55■■□□□ 1.84
TSC22D3-205ENST00000372390 CICQ96RK0 1608 aaPredicted RBP26.54■■□□□ 1.84
TSC22D3-205ENST00000372390 SLC27A3Q5K4L6 730 aa26.53■■□□□ 1.84
TSC22D3-205ENST00000372390 CCDC30Q5VVM6 783 aa26.53■■□□□ 1.84
TSC22D3-205ENST00000372390 TNNQ9UQP3 1299 aa26.53■■□□□ 1.84
TSC22D3-205ENST00000372390 TJP1Q07157 1748 aa26.53■■□□□ 1.84
TSC22D3-205ENST00000372390 ATP6V1AP38606 617 aa26.53■■□□□ 1.84
TSC22D3-205ENST00000372390 ANXA1P04083 346 aa26.52■■□□□ 1.84
TSC22D3-205ENST00000372390 SLC4A2P04920 1241 aa26.52■■□□□ 1.84
TSC22D3-205ENST00000372390 CHPF2Q9P2E5 772 aa26.52■■□□□ 1.84
TSC22D3-205ENST00000372390 NOB1Q9ULX3 412 aaKnown RBP26.52■■□□□ 1.84
TSC22D3-205ENST00000372390 TXNRD1Q16881 649 aa26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 G2E3Q7L622 706 aa26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 DNAJC10Q8IXB1 793 aa26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 CACNA1FO60840 1977 aa26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 HMGB2P26583 209 aaKnown RBP26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 EN1Q05925 392 aaPredicted RBP26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 TEX13AQ9BXU3 409 aaPredicted RBP26.51■■□□□ 1.83
TSC22D3-205ENST00000372390 PROSER3Q2NL68 480 aa26.5■■□□□ 1.83
TSC22D3-205ENST00000372390 C20orf194Q5TEA3 1177 aa26.5■■□□□ 1.83
TSC22D3-205ENST00000372390 PIP4K2AP48426 406 aaPredicted RBP26.49■■□□□ 1.83
TSC22D3-205ENST00000372390 BRPF1P55201 1214 aaPredicted RBP26.49■■□□□ 1.83
TSC22D3-205ENST00000372390 DEFB132Q7Z7B7 95 aa26.49■■□□□ 1.83
TSC22D3-205ENST00000372390 STK31Q9BXU1 1019 aa26.49■■□□□ 1.83
TSC22D3-205ENST00000372390 CAMKK2Q96RR4 588 aa26.49■■□□□ 1.83
TSC22D3-205ENST00000372390 PDIA6Q15084 440 aa26.48■■□□□ 1.83
TSC22D3-205ENST00000372390 CANXP27824 592 aaKnown RBP26.47■■□□□ 1.83
TSC22D3-205ENST00000372390 KIF16BQ96L93 1317 aa26.47■■□□□ 1.83
TSC22D3-205ENST00000372390 STARD3NLO95772 234 aa26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 KCNQ4P56696 695 aa26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 ITPK1Q13572 414 aa26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 EZH2Q15910 746 aaKnown RBP26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 RREB1Q92766 1687 aa26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 COL5A3P25940 1745 aaPredicted RBP26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 CHMP4AQ9BY43 222 aa26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 PHAXQ9H814 394 aaKnown RBP26.46■■□□□ 1.83
TSC22D3-205ENST00000372390 A1BGP04217 495 aa26.45■■□□□ 1.82
TSC22D3-205ENST00000372390 PROM2Q8N271 834 aa26.45■■□□□ 1.82
TSC22D3-205ENST00000372390 TAF1LQ8IZX4 1826 aa26.45■■□□□ 1.82
TSC22D3-205ENST00000372390 ZKSCAN2Q63HK3 967 aa26.44■■□□□ 1.82
TSC22D3-205ENST00000372390 LRRC4BQ9NT99 713 aa26.44■■□□□ 1.82
TSC22D3-205ENST00000372390 DBF4Q9UBU7 674 aaPredicted RBP26.44■■□□□ 1.82
TSC22D3-205ENST00000372390 TRIM27P14373 513 aa26.44■■□□□ 1.82
TSC22D3-205ENST00000372390 CLUAP1Q96AJ1 413 aa26.44■■□□□ 1.82
TSC22D3-205ENST00000372390 NBPF26B4DH59 902 aa26.43■■□□□ 1.82
TSC22D3-205ENST00000372390 MYL6BP14649 208 aa26.43■■□□□ 1.82
TSC22D3-205ENST00000372390 NBPF14Q5TI25 921 aa26.43■■□□□ 1.82
TSC22D3-205ENST00000372390 NBPF10Q6P3W6 841 aaKnown RBP26.43■■□□□ 1.82
TSC22D3-205ENST00000372390 NBPF15Q8N660 670 aa26.43■■□□□ 1.82
TSC22D3-205ENST00000372390 DDX21Q9NR30 783 aaKnown RBP eCLIP26.43■■□□□ 1.82
TSC22D3-205ENST00000372390 CYP19A1P11511 503 aaPredicted RBP26.42■■□□□ 1.82
TSC22D3-205ENST00000372390 RLBP1P12271 317 aa26.42■■□□□ 1.82
TSC22D3-205ENST00000372390 LINC00116Q8NCU8 138 aa26.42■■□□□ 1.82
TSC22D3-205ENST00000372390 PANK1Q8TE04 598 aa26.42■■□□□ 1.82
TSC22D3-205ENST00000372390 FLIIQ13045 1269 aa26.42■■□□□ 1.82
TSC22D3-205ENST00000372390 ATF7IPQ6VMQ6 1270 aa26.42■■□□□ 1.82
TSC22D3-205ENST00000372390 C4BP0C0L5 1744 aa26.41■■□□□ 1.82
TSC22D3-205ENST00000372390 FKBP8Q14318 412 aa26.41■■□□□ 1.82
TSC22D3-205ENST00000372390 LRP10Q7Z4F1 713 aa26.41■■□□□ 1.82
TSC22D3-205ENST00000372390 MYH14Q7Z406 1995 aaKnown RBP26.41■■□□□ 1.82
TSC22D3-205ENST00000372390 NUP188Q5SRE5 1749 aa26.4■■□□□ 1.82
TSC22D3-205ENST00000372390 NEFLP07196 543 aa26.4■■□□□ 1.82
TSC22D3-205ENST00000372390 CNTNAP4Q9C0A0 1308 aa26.4■■□□□ 1.82
TSC22D3-205ENST00000372390 IPO8O15397 1037 aaKnown RBP26.39■■□□□ 1.82
TSC22D3-205ENST00000372390 CRKLP46109 303 aaKnown RBP26.39■■□□□ 1.81
TSC22D3-205ENST00000372390 ERBB4Q15303 1308 aa26.39■■□□□ 1.81
TSC22D3-205ENST00000372390 CCDC87Q9NVE4 849 aa26.38■■□□□ 1.81
TSC22D3-205ENST00000372390 HYPKQ9NX55 129 aa26.38■■□□□ 1.81
TSC22D3-205ENST00000372390 ARHGAP45Q92619 1136 aa26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 PTPRCP08575 1304 aa26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 FKBP5Q13451 457 aaPredicted RBP26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 RC3H1Q5TC82 1133 aaKnown RBP26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 AK7Q96M32 723 aa26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 CRBNQ96SW2 442 aa26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 GTF3C3Q9Y5Q9 886 aa26.37■■□□□ 1.81
TSC22D3-205ENST00000372390 F6X3S4 739 aa26.36■■□□□ 1.81
TSC22D3-205ENST00000372390 AIMP1Q12904 312 aaKnown RBP26.36■■□□□ 1.81
TSC22D3-205ENST00000372390 DZIP1LQ8IYY4 767 aaKnown RBP26.36■■□□□ 1.81
TSC22D3-205ENST00000372390 ZBTB1Q9Y2K1 713 aa26.36■■□□□ 1.81
TSC22D3-205ENST00000372390 PDE3AQ14432 1141 aa26.35■■□□□ 1.81
TSC22D3-205ENST00000372390 XAGE3Q8WTP9 111 aa26.35■■□□□ 1.81
TSC22D3-205ENST00000372390 INTS5Q6P9B9 1019 aaKnown RBP26.35■■□□□ 1.81
TSC22D3-205ENST00000372390 API5Q9BZZ5 524 aaKnown RBP26.35■■□□□ 1.81
TSC22D3-205ENST00000372390 FTSJ3Q8IY81 847 aaKnown RBP26.34■■□□□ 1.81
TSC22D3-205ENST00000372390 COG6Q9Y2V7 657 aa26.34■■□□□ 1.81
TSC22D3-205ENST00000372390 ABCC4O15439 1325 aa26.33■■□□□ 1.81
TSC22D3-205ENST00000372390 COPS6Q7L5N1 327 aa26.33■■□□□ 1.81
TSC22D3-205ENST00000372390 EXOC6Q8TAG9 804 aa26.33■■□□□ 1.81
TSC22D3-205ENST00000372390 GNPATO15228 680 aa26.32■■□□□ 1.8
TSC22D3-205ENST00000372390 TMEM57Q8N5G2 664 aa26.32■■□□□ 1.8
TSC22D3-205ENST00000372390 ZNF330Q9Y3S2 320 aaPredicted RBP26.32■■□□□ 1.8
TSC22D3-205ENST00000372390 NPM2Q86SE8 214 aaKnown RBP26.32■■□□□ 1.8
TSC22D3-205ENST00000372390 ADCY9O60503 1353 aa26.31■■□□□ 1.8
TSC22D3-205ENST00000372390 STK32BQ9NY57 414 aa26.31■■□□□ 1.8
TSC22D3-205ENST00000372390 TTLL7Q6ZT98 887 aa26.3■■□□□ 1.8
TSC22D3-205ENST00000372390 RTCBQ9Y3I0 505 aaKnown RBP26.3■■□□□ 1.8
TSC22D3-205ENST00000372390 PI4KAP2A4QPH2 592 aa26.3■■□□□ 1.8
TSC22D3-205ENST00000372390 IL6STP40189 918 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms