RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 PHAXQ9H814 394 aaKnown RBP22.09■■□□□ 1.13
CD40-201ENST00000372276 RGPD2P0DJD1 1756 aa22.09■■□□□ 1.13
CD40-201ENST00000372276 DCCP43146 1447 aa22.09■■□□□ 1.13
CD40-201ENST00000372276 RBM42Q9BTD8 480 aaKnown RBP22.09■■□□□ 1.13
CD40-201ENST00000372276 HYPKQ9NX55 129 aa22.09■■□□□ 1.13
CD40-201ENST00000372276 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.13
CD40-201ENST00000372276 FSD2A1L4K1 749 aa22.08■■□□□ 1.13
CD40-201ENST00000372276 CD2BP2O95400 341 aaKnown RBP22.08■■□□□ 1.13
CD40-201ENST00000372276 MTX1Q13505 466 aa22.08■■□□□ 1.13
CD40-201ENST00000372276 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
CD40-201ENST00000372276 ZBTB7CA1YPR0 619 aa22.07■■□□□ 1.12
CD40-201ENST00000372276 PPP1R42Q7Z4L9 355 aa22.07■■□□□ 1.12
CD40-201ENST00000372276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.12
CD40-201ENST00000372276 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
CD40-201ENST00000372276 DDX58O95786 925 aaKnown RBP22.06■■□□□ 1.12
CD40-201ENST00000372276 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
CD40-201ENST00000372276 PI4KAP2A4QPH2 592 aa22.06■■□□□ 1.12
CD40-201ENST00000372276 SURF6O75683 361 aaKnown RBP22.06■■□□□ 1.12
CD40-201ENST00000372276 CHMLP26374 656 aa22.06■■□□□ 1.12
CD40-201ENST00000372276 KSR2Q6VAB6 950 aa22.06■■□□□ 1.12
CD40-201ENST00000372276 ERC1Q8IUD2 1116 aa22.06■■□□□ 1.12
CD40-201ENST00000372276 PI4KAP1Q8N8J0 262 aa22.06■■□□□ 1.12
CD40-201ENST00000372276 GIGYF1O75420 1035 aaPredicted RBP22.05■■□□□ 1.12
CD40-201ENST00000372276 MRE11P49959 708 aa22.05■■□□□ 1.12
CD40-201ENST00000372276 MPRIPQ6WCQ1 1025 aa22.05■■□□□ 1.12
CD40-201ENST00000372276 SIPA1L3O60292 1781 aaPredicted RBP22.04■■□□□ 1.12
CD40-201ENST00000372276 TRIM6-TRIM34B2RNG4 842 aa22.04■■□□□ 1.12
CD40-201ENST00000372276 RHPN1Q8TCX5 695 aa22.04■■□□□ 1.12
CD40-201ENST00000372276 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
CD40-201ENST00000372276 ALS2Q96Q42 1657 aa22.04■■□□□ 1.12
CD40-201ENST00000372276 SRGAP3O43295 1099 aa22.03■■□□□ 1.12
CD40-201ENST00000372276 TTC41PQ6P2S7 1318 aa22.03■■□□□ 1.12
CD40-201ENST00000372276 USP42Q9H9J4 1324 aaKnown RBP22.03■■□□□ 1.12
CD40-201ENST00000372276 ATF3P18847 181 aa22.02■■□□□ 1.12
CD40-201ENST00000372276 LMOD2Q6P5Q4 547 aa22.02■■□□□ 1.12
CD40-201ENST00000372276 RAPGEF4Q8WZA2 1011 aa22.02■■□□□ 1.12
CD40-201ENST00000372276 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
CD40-201ENST00000372276 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
CD40-201ENST00000372276 RILPL2Q969X0 211 aa22.02■■□□□ 1.11
CD40-201ENST00000372276 BRPF3Q9ULD4 1205 aa22.02■■□□□ 1.11
CD40-201ENST00000372276 ERBB3P21860 1342 aa22.02■■□□□ 1.11
CD40-201ENST00000372276 ADCY9O60503 1353 aa22.02■■□□□ 1.11
CD40-201ENST00000372276 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
CD40-201ENST00000372276 FBXO41Q8TF61 875 aa22.01■■□□□ 1.11
CD40-201ENST00000372276 DDX21Q9NR30 783 aaKnown RBP eCLIP22.01■■□□□ 1.11
CD40-201ENST00000372276 GPATCH3Q96I76 525 aa22■■□□□ 1.11
CD40-201ENST00000372276 TATP17735 454 aaPredicted RBP21.99■■□□□ 1.11
CD40-201ENST00000372276 LINS1Q8NG48 757 aa21.99■■□□□ 1.11
CD40-201ENST00000372276 INTS4Q96HW7 963 aaKnown RBP21.99■■□□□ 1.11
CD40-201ENST00000372276 C9orf78Q9NZ63 289 aaPredicted RBP21.99■■□□□ 1.11
CD40-201ENST00000372276 PXDNQ92626 1479 aa21.99■■□□□ 1.11
CD40-201ENST00000372276 KCNQ3O43525 872 aa21.98■■□□□ 1.11
CD40-201ENST00000372276 CYP2E1P05181 493 aaPredicted RBP21.98■■□□□ 1.11
CD40-201ENST00000372276 UTYO14607 1347 aa21.98■■□□□ 1.11
CD40-201ENST00000372276 GLRX3O76003 335 aaKnown RBP21.98■■□□□ 1.11
CD40-201ENST00000372276 BAG4O95429 457 aaKnown RBP21.98■■□□□ 1.11
CD40-201ENST00000372276 NBPF7P0C2Y1 421 aaPredicted RBP21.98■■□□□ 1.11
CD40-201ENST00000372276 CLASRPQ8N2M8 674 aaKnown RBP21.98■■□□□ 1.11
CD40-201ENST00000372276 FAM43AQ8N2R8 423 aa21.97■■□□□ 1.11
CD40-201ENST00000372276 RUFY2Q8WXA3 655 aa21.97■■□□□ 1.11
CD40-201ENST00000372276 ANO2Q9NQ90 1003 aa21.97■■□□□ 1.11
CD40-201ENST00000372276 MAP3K2Q9Y2U5 619 aa21.97■■□□□ 1.11
CD40-201ENST00000372276 AK9Q5TCS8 1911 aa21.97■■□□□ 1.11
CD40-201ENST00000372276 NPHP3Q7Z494 1330 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 SSFA2P28290 1259 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 NEK4P51957 841 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 XPCQ01831 940 aaPredicted RBP21.96■■□□□ 1.11
CD40-201ENST00000372276 KLHL40Q2TBA0 621 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 CADPS2Q86UW7 1296 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 FOXD4L1Q9NU39 408 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 AXIN2Q9Y2T1 843 aa21.96■■□□□ 1.11
CD40-201ENST00000372276 UBAP1LF5GYI3 381 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 TOM1O60784 492 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 LARP1Q6PKG0 1096 aaKnown RBP21.95■■□□□ 1.1
CD40-201ENST00000372276 SCN11AQ9UI33 1791 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 OS9Q13438 667 aaPredicted RBP21.95■■□□□ 1.1
CD40-201ENST00000372276 CUL4AQ13619 759 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 PI4K2BQ8TCG2 481 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 GZF1Q9H116 711 aaPredicted RBP21.95■■□□□ 1.1
CD40-201ENST00000372276 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 IL1RAPL2Q9NP60 686 aa21.95■■□□□ 1.1
CD40-201ENST00000372276 IFNL2Q8IZJ0 200 aa21.94■■□□□ 1.1
CD40-201ENST00000372276 XRCC6P12956 609 aaKnown RBP eCLIP21.93■■□□□ 1.1
CD40-201ENST00000372276 HSPA4P34932 840 aa21.93■■□□□ 1.1
CD40-201ENST00000372276 NEXNQ0ZGT2 675 aa21.93■■□□□ 1.1
CD40-201ENST00000372276 ZNF790Q6PG37 636 aa21.93■■□□□ 1.1
CD40-201ENST00000372276 KIAA1211Q6ZU35 1233 aa21.93■■□□□ 1.1
CD40-201ENST00000372276 RGPD5Q99666 1765 aa21.92■■□□□ 1.1
CD40-201ENST00000372276 GRM8O00222 908 aa21.92■■□□□ 1.1
CD40-201ENST00000372276 HIP1O00291 1037 aa21.92■■□□□ 1.1
CD40-201ENST00000372276 NUTM1Q86Y26 1132 aa21.92■■□□□ 1.1
CD40-201ENST00000372276 SGSM2O43147 1006 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 DCAF5Q96JK2 942 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 NLRP2Q9NX02 1062 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 PHKG2P15735 406 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 TSHZ3Q63HK5 1081 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 TMX3Q96JJ7 454 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 GRPEL1Q9HAV7 217 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 ECHDC1Q9NTX5 307 aa21.91■■□□□ 1.1
CD40-201ENST00000372276 CRYBG1Q9Y4K1 1723 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms