RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.16■■■□□ 2.9
ATPAF1-202ENST00000371937 PIGBQ92521 554 aa33.14■■■□□ 2.9
ATPAF1-202ENST00000371937 ANXA1P04083 346 aa33.14■■■□□ 2.9
ATPAF1-202ENST00000371937 KCPQ6ZWJ8 1503 aa33.13■■■□□ 2.89
ATPAF1-202ENST00000371937 USP16Q9Y5T5 823 aa33.13■■■□□ 2.89
ATPAF1-202ENST00000371937 PDIA6Q15084 440 aa33.12■■■□□ 2.89
ATPAF1-202ENST00000371937 FAM98CQ17RN3 349 aaKnown RBP33.12■■■□□ 2.89
ATPAF1-202ENST00000371937 PROSER3Q2NL68 480 aa33.12■■■□□ 2.89
ATPAF1-202ENST00000371937 GLI3P10071 1580 aa33.11■■■□□ 2.89
ATPAF1-202ENST00000371937 ITGB4P16144 1822 aa33.11■■■□□ 2.89
ATPAF1-202ENST00000371937 BCL9O00512 1426 aa33.11■■■□□ 2.89
ATPAF1-202ENST00000371937 LAMB4A4D0S4 1761 aa33.1■■■□□ 2.89
ATPAF1-202ENST00000371937 DNAAF4Q8WXU2 420 aa33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 ERBB4Q15303 1308 aa33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 PI4KAP2A4QPH2 592 aa33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 PTCD1O75127 700 aaKnown RBP33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 DDX58O95786 925 aaKnown RBP33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 PI4KAP1Q8N8J0 262 aa33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 MARCH10Q8NA82 808 aaPredicted RBP33.09■■■□□ 2.89
ATPAF1-202ENST00000371937 N4BP2Q86UW6 1770 aaPredicted RBP33.08■■■□□ 2.89
ATPAF1-202ENST00000371937 KSR2Q6VAB6 950 aa33.07■■■□□ 2.88
ATPAF1-202ENST00000371937 C1orf115Q9H7X2 142 aa33.07■■■□□ 2.88
ATPAF1-202ENST00000371937 ASAP1Q9ULH1 1129 aa33.07■■■□□ 2.88
ATPAF1-202ENST00000371937 VSIG10Q8N0Z9 540 aa33.06■■■□□ 2.88
ATPAF1-202ENST00000371937 MEIS3Q99687 375 aa33.06■■■□□ 2.88
ATPAF1-202ENST00000371937 ATG3Q9NT62 314 aa33.06■■■□□ 2.88
ATPAF1-202ENST00000371937 SYTL4Q96C24 671 aaPredicted RBP33.05■■■□□ 2.88
ATPAF1-202ENST00000371937 SRCIN1Q9C0H9 1055 aa33.05■■■□□ 2.88
ATPAF1-202ENST00000371937 AFF2P51816 1311 aa33.05■■■□□ 2.88
ATPAF1-202ENST00000371937 ADCY9O60503 1353 aa33.05■■■□□ 2.88
ATPAF1-202ENST00000371937 PRIM1P49642 420 aaKnown RBP33.05■■■□□ 2.88
ATPAF1-202ENST00000371937 TEX13AQ9BXU3 409 aaPredicted RBP33.05■■■□□ 2.88
ATPAF1-202ENST00000371937 GNAI3P08754 354 aa33.04■■■□□ 2.88
ATPAF1-202ENST00000371937 MYL6BP14649 208 aa33.04■■■□□ 2.88
ATPAF1-202ENST00000371937 ATP10DQ9P241 1426 aa33.03■■■□□ 2.88
ATPAF1-202ENST00000371937 DOT1LQ8TEK3 1739 aa33.03■■■□□ 2.88
ATPAF1-202ENST00000371937 RPAP2Q8IXW5 612 aaPredicted RBP33.02■■■□□ 2.88
ATPAF1-202ENST00000371937 KAT6BQ8WYB5 2073 aa33.01■■■□□ 2.88
ATPAF1-202ENST00000371937 BEND3Q5T5X7 828 aa33.01■■■□□ 2.87
ATPAF1-202ENST00000371937 MAP3K2Q9Y2U5 619 aa33.01■■■□□ 2.87
ATPAF1-202ENST00000371937 AIMP1Q12904 312 aaKnown RBP33■■■□□ 2.87
ATPAF1-202ENST00000371937 LRP10Q7Z4F1 713 aa33■■■□□ 2.87
ATPAF1-202ENST00000371937 SMC5Q8IY18 1101 aa33■■■□□ 2.87
ATPAF1-202ENST00000371937 GJD4Q96KN9 370 aaPredicted RBP33■■■□□ 2.87
ATPAF1-202ENST00000371937 XAGE3Q8WTP9 111 aa32.99■■■□□ 2.87
ATPAF1-202ENST00000371937 A0A0G2JS52 829 aa32.98■■■□□ 2.87
ATPAF1-202ENST00000371937 GNAI2P04899 355 aa32.98■■■□□ 2.87
ATPAF1-202ENST00000371937 MYT1Q01538 1121 aa32.98■■■□□ 2.87
ATPAF1-202ENST00000371937 COPS6Q7L5N1 327 aa32.98■■■□□ 2.87
ATPAF1-202ENST00000371937 TRPC5Q9UL62 973 aaPredicted RBP32.98■■■□□ 2.87
ATPAF1-202ENST00000371937 ANKRD44Q8N8A2 993 aa32.98■■■□□ 2.87
ATPAF1-202ENST00000371937 RIC3Q7Z5B4 369 aa32.97■■■□□ 2.87
ATPAF1-202ENST00000371937 SIRT2Q8IXJ6 389 aa32.97■■■□□ 2.87
ATPAF1-202ENST00000371937 RBM42Q9BTD8 480 aaKnown RBP32.97■■■□□ 2.87
ATPAF1-202ENST00000371937 GCC1Q96CN9 775 aa32.96■■■□□ 2.87
ATPAF1-202ENST00000371937 USP44Q9H0E7 712 aa32.96■■■□□ 2.87
ATPAF1-202ENST00000371937 TSHZ2Q9NRE2 1034 aa32.96■■■□□ 2.87
ATPAF1-202ENST00000371937 ATRNO75882 1429 aa32.95■■■□□ 2.87
ATPAF1-202ENST00000371937 ALDH1L1O75891 902 aa32.95■■■□□ 2.87
ATPAF1-202ENST00000371937 CEP85Q6P2H3 762 aa32.95■■■□□ 2.86
ATPAF1-202ENST00000371937 SKAP1Q86WV1 359 aa32.95■■■□□ 2.86
ATPAF1-202ENST00000371937 PDZRN3Q9UPQ7 1066 aa32.95■■■□□ 2.86
ATPAF1-202ENST00000371937 THSD7AQ9UPZ6 1657 aa32.94■■■□□ 2.86
ATPAF1-202ENST00000371937 STARD3NLO95772 234 aa32.94■■■□□ 2.86
ATPAF1-202ENST00000371937 ANKRD13DQ6ZTN6 518 aa32.94■■■□□ 2.86
ATPAF1-202ENST00000371937 ACSBG1Q96GR2 724 aa32.94■■■□□ 2.86
ATPAF1-202ENST00000371937 NBPF26B4DH59 902 aa32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 UBTFL1P0CB47 393 aaPredicted RBP32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 NBPF14Q5TI25 921 aa32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 NBPF10Q6P3W6 841 aaKnown RBP32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 NBPF15Q8N660 670 aa32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 LINS1Q8NG48 757 aa32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 PIP4K2AP48426 406 aaPredicted RBP32.93■■■□□ 2.86
ATPAF1-202ENST00000371937 A1BGP04217 495 aa32.92■■■□□ 2.86
ATPAF1-202ENST00000371937 NEXNQ0ZGT2 675 aa32.91■■■□□ 2.86
ATPAF1-202ENST00000371937 HMMRO75330 724 aa32.91■■■□□ 2.86
ATPAF1-202ENST00000371937 RGS3P49796 1198 aa32.91■■■□□ 2.86
ATPAF1-202ENST00000371937 DNAJC10Q8IXB1 793 aa32.91■■■□□ 2.86
ATPAF1-202ENST00000371937 ONECUT3O60422 494 aaPredicted RBP32.89■■■□□ 2.86
ATPAF1-202ENST00000371937 PLBD2Q8NHP8 589 aa32.88■■■□□ 2.85
ATPAF1-202ENST00000371937 METTL22Q9BUU2 404 aaPredicted RBP32.88■■■□□ 2.85
ATPAF1-202ENST00000371937 IBTKQ9P2D0 1353 aaPredicted RBP32.88■■■□□ 2.85
ATPAF1-202ENST00000371937 HDAC5Q9UQL6 1122 aa32.88■■■□□ 2.85
ATPAF1-202ENST00000371937 SMARCC1Q92922 1105 aaPredicted RBP32.86■■■□□ 2.85
ATPAF1-202ENST00000371937 NUCB1Q02818 461 aa32.86■■■□□ 2.85
ATPAF1-202ENST00000371937 SLC4A9Q96Q91 983 aa32.86■■■□□ 2.85
ATPAF1-202ENST00000371937 DCTPP1Q9H773 170 aa32.86■■■□□ 2.85
ATPAF1-202ENST00000371937 QTRT2Q9H974 415 aaKnown RBP32.86■■■□□ 2.85
ATPAF1-202ENST00000371937 C9orf78Q9NZ63 289 aaPredicted RBP32.85■■■□□ 2.85
ATPAF1-202ENST00000371937 LRRFIP2Q9Y608 721 aaKnown RBP32.85■■■□□ 2.85
ATPAF1-202ENST00000371937 CWF19L2Q2TBE0 894 aaKnown RBP32.84■■■□□ 2.85
ATPAF1-202ENST00000371937 NBPF7P0C2Y1 421 aaPredicted RBP32.83■■■□□ 2.85
ATPAF1-202ENST00000371937 CYP19A1P11511 503 aaPredicted RBP32.83■■■□□ 2.85
ATPAF1-202ENST00000371937 ATP8B2P98198 1209 aa32.82■■■□□ 2.84
ATPAF1-202ENST00000371937 MYD88Q99836 296 aa32.82■■■□□ 2.84
ATPAF1-202ENST00000371937 KCNQ2O43526 872 aa32.81■■■□□ 2.84
ATPAF1-202ENST00000371937 IGKV5-2P06315 115 aa32.81■■■□□ 2.84
ATPAF1-202ENST00000371937 CHD1LQ86WJ1 897 aa32.81■■■□□ 2.84
ATPAF1-202ENST00000371937 NEURL1BA8MQ27 555 aa32.8■■■□□ 2.84
ATPAF1-202ENST00000371937 GRM8O00222 908 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms