RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 AEBP1Q8IUX7 1158 aa20.49■□□□□ 0.87
RPF1-202ENST00000370656 TNS4Q8IZW8 715 aa20.49■□□□□ 0.87
RPF1-202ENST00000370656 CHRNA5P30532 468 aa20.48■□□□□ 0.87
RPF1-202ENST00000370656 POLRMTO00411 1230 aaKnown RBP20.47■□□□□ 0.87
RPF1-202ENST00000370656 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
RPF1-202ENST00000370656 RRAGCQ9HB90 399 aa20.47■□□□□ 0.87
RPF1-202ENST00000370656 TM4SF1P30408 202 aa20.46■□□□□ 0.87
RPF1-202ENST00000370656 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.87
RPF1-202ENST00000370656 INTS5Q6P9B9 1019 aaKnown RBP20.46■□□□□ 0.87
RPF1-202ENST00000370656 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
RPF1-202ENST00000370656 VIRMAQ69YN4 1812 aaKnown RBP20.46■□□□□ 0.87
RPF1-202ENST00000370656 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
RPF1-202ENST00000370656 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
RPF1-202ENST00000370656 USPL1Q5W0Q7 1092 aa20.45■□□□□ 0.86
RPF1-202ENST00000370656 AFDNP55196 1824 aaKnown RBP20.45■□□□□ 0.86
RPF1-202ENST00000370656 PCNTO95613 3336 aa20.45■□□□□ 0.86
RPF1-202ENST00000370656 SMC1BQ8NDV3 1235 aa20.44■□□□□ 0.86
RPF1-202ENST00000370656 SLC52A2Q9HAB3 445 aa20.44■□□□□ 0.86
RPF1-202ENST00000370656 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
RPF1-202ENST00000370656 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
RPF1-202ENST00000370656 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
RPF1-202ENST00000370656 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
RPF1-202ENST00000370656 DLEC1Q9Y238 1755 aa20.42■□□□□ 0.86
RPF1-202ENST00000370656 NARFQ9UHQ1 456 aa20.42■□□□□ 0.86
RPF1-202ENST00000370656 CCDC88AQ3V6T2 1871 aa20.41■□□□□ 0.86
RPF1-202ENST00000370656 LMNB1P20700 586 aa20.41■□□□□ 0.86
RPF1-202ENST00000370656 IL13P35225 146 aa20.41■□□□□ 0.86
RPF1-202ENST00000370656 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
RPF1-202ENST00000370656 COL15A1P39059 1388 aa20.4■□□□□ 0.86
RPF1-202ENST00000370656 PRELPP51888 382 aa20.4■□□□□ 0.86
RPF1-202ENST00000370656 NRXN2Q9P2S2 1712 aa20.4■□□□□ 0.86
RPF1-202ENST00000370656 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
RPF1-202ENST00000370656 NFIXQ14938 502 aa20.39■□□□□ 0.85
RPF1-202ENST00000370656 TTLL6Q8N841 843 aa20.39■□□□□ 0.85
RPF1-202ENST00000370656 MRC1P22897 1456 aa20.38■□□□□ 0.85
RPF1-202ENST00000370656 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
RPF1-202ENST00000370656 SERPINB2P05120 415 aa20.38■□□□□ 0.85
RPF1-202ENST00000370656 RASSF7Q02833 373 aa20.38■□□□□ 0.85
RPF1-202ENST00000370656 DIEXFQ68CQ4 756 aaKnown RBP20.38■□□□□ 0.85
RPF1-202ENST00000370656 LGR6Q9HBX8 967 aa20.38■□□□□ 0.85
RPF1-202ENST00000370656 TIAM2Q8IVF5 1701 aa20.37■□□□□ 0.85
RPF1-202ENST00000370656 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
RPF1-202ENST00000370656 SLC39A6Q13433 755 aa20.37■□□□□ 0.85
RPF1-202ENST00000370656 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
RPF1-202ENST00000370656 H0YIN7 160 aa20.36■□□□□ 0.85
RPF1-202ENST00000370656 ZBTB1Q9Y2K1 713 aa20.36■□□□□ 0.85
RPF1-202ENST00000370656 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
RPF1-202ENST00000370656 HSPA1AP0DMV8 641 aaKnown RBP20.34■□□□□ 0.85
RPF1-202ENST00000370656 HSPA1BP0DMV9 641 aaKnown RBP20.34■□□□□ 0.85
RPF1-202ENST00000370656 A0A087WZG4 1122 aa20.33■□□□□ 0.85
RPF1-202ENST00000370656 STARD3NLO95772 234 aa20.33■□□□□ 0.85
RPF1-202ENST00000370656 HMOX1P09601 288 aa20.33■□□□□ 0.85
RPF1-202ENST00000370656 DPY19L2Q6NUT2 758 aa20.33■□□□□ 0.85
RPF1-202ENST00000370656 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.85
RPF1-202ENST00000370656 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.85
RPF1-202ENST00000370656 UBR2Q8IWV8 1755 aa20.33■□□□□ 0.84
RPF1-202ENST00000370656 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
RPF1-202ENST00000370656 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
RPF1-202ENST00000370656 DICER1Q9UPY3 1922 aaKnown RBP20.31■□□□□ 0.84
RPF1-202ENST00000370656 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
RPF1-202ENST00000370656 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
RPF1-202ENST00000370656 PDE6BP35913 854 aa20.29■□□□□ 0.84
RPF1-202ENST00000370656 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
RPF1-202ENST00000370656 NFKBIEO00221 500 aa20.28■□□□□ 0.84
RPF1-202ENST00000370656 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
RPF1-202ENST00000370656 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
RPF1-202ENST00000370656 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
RPF1-202ENST00000370656 ZNF622Q969S3 477 aaKnown RBP eCLIP20.28■□□□□ 0.84
RPF1-202ENST00000370656 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
RPF1-202ENST00000370656 CARMIL3Q8ND23 1372 aa20.28■□□□□ 0.84
RPF1-202ENST00000370656 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
RPF1-202ENST00000370656 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
RPF1-202ENST00000370656 BRIP1Q9BX63 1249 aa20.27■□□□□ 0.84
RPF1-202ENST00000370656 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
RPF1-202ENST00000370656 TEFQ10587 303 aa20.26■□□□□ 0.83
RPF1-202ENST00000370656 ERFEQ4G0M1 354 aa20.26■□□□□ 0.83
RPF1-202ENST00000370656 NPHP1O15259 732 aa20.25■□□□□ 0.83
RPF1-202ENST00000370656 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
RPF1-202ENST00000370656 C21orf2O43822 256 aa20.24■□□□□ 0.83
RPF1-202ENST00000370656 TBC1D9BQ66K14 1250 aa20.24■□□□□ 0.83
RPF1-202ENST00000370656 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
RPF1-202ENST00000370656 COL11A2P13942 1736 aaPredicted RBP20.23■□□□□ 0.83
RPF1-202ENST00000370656 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
RPF1-202ENST00000370656 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
RPF1-202ENST00000370656 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
RPF1-202ENST00000370656 ZNF219Q9P2Y4 722 aaPredicted RBP20.23■□□□□ 0.83
RPF1-202ENST00000370656 POTECB2RU33 542 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 GAS2L2Q8NHY3 880 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
RPF1-202ENST00000370656 SETDB2Q96T68 719 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 LTBP3Q9NS15 1303 aa20.22■□□□□ 0.83
RPF1-202ENST00000370656 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
RPF1-202ENST00000370656 GNAT3A8MTJ3 354 aa20.21■□□□□ 0.83
RPF1-202ENST00000370656 ST5P78524 1137 aa20.21■□□□□ 0.83
RPF1-202ENST00000370656 SOGA3Q5TF21 947 aa20.21■□□□□ 0.83
RPF1-202ENST00000370656 CNBD1Q8NA66 436 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms