RNA–Protein interactions for RNA: ENST00000369484.7

CMC4-202, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC4, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-202ENST00000369484 USPL1Q5W0Q7 1092 aa36■■■■□ 3.35
CMC4-202ENST00000369484 SIPA1L3O60292 1781 aaPredicted RBP35.99■■■■□ 3.35
CMC4-202ENST00000369484 DLEC1Q9Y238 1755 aa35.99■■■■□ 3.35
CMC4-202ENST00000369484 COL15A1P39059 1388 aa35.99■■■■□ 3.35
CMC4-202ENST00000369484 DALRD3Q5D0E6 543 aaKnown RBP35.98■■■■□ 3.35
CMC4-202ENST00000369484 NPC1L1Q9UHC9 1359 aa35.98■■■■□ 3.35
CMC4-202ENST00000369484 VSIG10Q8N0Z9 540 aa35.97■■■■□ 3.35
CMC4-202ENST00000369484 ZBTB1Q9Y2K1 713 aa35.97■■■■□ 3.35
CMC4-202ENST00000369484 NARFQ9UHQ1 456 aa35.96■■■■□ 3.35
CMC4-202ENST00000369484 CHRNA5P30532 468 aa35.95■■■■□ 3.35
CMC4-202ENST00000369484 C9orf131Q5VYM1 1079 aa35.94■■■■□ 3.34
CMC4-202ENST00000369484 TOMM70O94826 608 aa35.93■■■■□ 3.34
CMC4-202ENST00000369484 NFIXQ14938 502 aa35.92■■■■□ 3.34
CMC4-202ENST00000369484 NMRK2Q9NPI5 230 aa35.92■■■■□ 3.34
CMC4-202ENST00000369484 BCL2L12Q9HB09 334 aa35.9■■■■□ 3.34
CMC4-202ENST00000369484 CCDC88AQ3V6T2 1871 aa35.87■■■■□ 3.33
CMC4-202ENST00000369484 SCN7AQ01118 1682 aa35.87■■■■□ 3.33
CMC4-202ENST00000369484 TNRC6CQ9HCJ0 1690 aaKnown RBP35.87■■■■□ 3.33
CMC4-202ENST00000369484 TTC5Q8N0Z6 440 aa35.86■■■■□ 3.33
CMC4-202ENST00000369484 U2SURPO15042 1029 aaKnown RBP35.84■■■■□ 3.33
CMC4-202ENST00000369484 APLP1P51693 650 aa35.84■■■■□ 3.33
CMC4-202ENST00000369484 IL17REQ8NFR9 667 aa35.84■■■■□ 3.33
CMC4-202ENST00000369484 GAS2L2Q8NHY3 880 aa35.84■■■■□ 3.33
CMC4-202ENST00000369484 RNF181Q9P0P0 153 aa35.84■■■■□ 3.33
CMC4-202ENST00000369484 ANKRD31Q8N7Z5 1873 aa35.84■■■■□ 3.33
CMC4-202ENST00000369484 GNAT3A8MTJ3 354 aa35.83■■■■□ 3.33
CMC4-202ENST00000369484 STARD3NLO95772 234 aa35.83■■■■□ 3.33
CMC4-202ENST00000369484 SERPINB2P05120 415 aa35.83■■■■□ 3.33
CMC4-202ENST00000369484 CANXP27824 592 aaKnown RBP35.83■■■■□ 3.33
CMC4-202ENST00000369484 EIF5P55010 431 aaKnown RBP35.83■■■■□ 3.33
CMC4-202ENST00000369484 WDR90Q96KV7 1748 aa35.82■■■■□ 3.32
CMC4-202ENST00000369484 HEG1Q9ULI3 1381 aa35.81■■■■□ 3.32
CMC4-202ENST00000369484 TEFQ10587 303 aa35.81■■■■□ 3.32
CMC4-202ENST00000369484 IFFO2Q5TF58 517 aa35.81■■■■□ 3.32
CMC4-202ENST00000369484 ZNF496Q96IT1 587 aaPredicted RBP35.81■■■■□ 3.32
CMC4-202ENST00000369484 ZNF790Q6PG37 636 aa35.8■■■■□ 3.32
CMC4-202ENST00000369484 KDM2BQ8NHM5 1336 aa35.8■■■■□ 3.32
CMC4-202ENST00000369484 CNGB1Q14028 1251 aaPredicted RBP35.79■■■■□ 3.32
CMC4-202ENST00000369484 RBM46Q8TBY0 533 aaKnown RBP35.79■■■■□ 3.32
CMC4-202ENST00000369484 CARMIL3Q8ND23 1372 aa35.78■■■■□ 3.32
CMC4-202ENST00000369484 A0A087WZG4 1122 aa35.77■■■■□ 3.32
CMC4-202ENST00000369484 CEMIPQ8WUJ3 1361 aa35.76■■■■□ 3.32
CMC4-202ENST00000369484 TEX13AQ9BXU3 409 aaPredicted RBP35.76■■■■□ 3.32
CMC4-202ENST00000369484 TIAM2Q8IVF5 1701 aa35.76■■■■□ 3.31
CMC4-202ENST00000369484 ZC3H4Q9UPT8 1303 aaKnown RBP35.75■■■■□ 3.31
CMC4-202ENST00000369484 COL11A2P13942 1736 aaPredicted RBP35.74■■■■□ 3.31
CMC4-202ENST00000369484 BCORQ6W2J9 1755 aa35.74■■■■□ 3.31
CMC4-202ENST00000369484 RASSF7Q02833 373 aa35.73■■■■□ 3.31
CMC4-202ENST00000369484 C16orf71Q8IYS4 520 aaPredicted RBP35.73■■■■□ 3.31
CMC4-202ENST00000369484 TTLL6Q8N841 843 aa35.73■■■■□ 3.31
CMC4-202ENST00000369484 BICDL1Q6ZP65 573 aa35.72■■■■□ 3.31
CMC4-202ENST00000369484 C2CD5Q86YS7 1000 aa35.72■■■■□ 3.31
CMC4-202ENST00000369484 DNAJC5GQ8N7S2 189 aa35.72■■■■□ 3.31
CMC4-202ENST00000369484 DICER1Q9UPY3 1922 aaKnown RBP35.71■■■■□ 3.31
CMC4-202ENST00000369484 IL6STP40189 918 aaPredicted RBP35.7■■■■□ 3.31
CMC4-202ENST00000369484 TBC1D9BQ66K14 1250 aa35.7■■■■□ 3.31
CMC4-202ENST00000369484 PHACTR3Q96KR7 559 aa35.7■■■■□ 3.31
CMC4-202ENST00000369484 FMNL2Q96PY5 1086 aa35.7■■■■□ 3.31
CMC4-202ENST00000369484 RSPH6AQ9H0K4 717 aa35.7■■■■□ 3.31
CMC4-202ENST00000369484 FER1L6Q2WGJ9 1857 aa35.69■■■■□ 3.3
CMC4-202ENST00000369484 H0YIN7 160 aa35.69■■■■□ 3.3
CMC4-202ENST00000369484 LMNB1P20700 586 aa35.69■■■■□ 3.3
CMC4-202ENST00000369484 PRKAR2BP31323 418 aa35.69■■■■□ 3.3
CMC4-202ENST00000369484 RRAGCQ9HB90 399 aa35.69■■■■□ 3.3
CMC4-202ENST00000369484 PRELPP51888 382 aa35.68■■■■□ 3.3
CMC4-202ENST00000369484 FSTL1Q12841 308 aa35.68■■■■□ 3.3
CMC4-202ENST00000369484 PCNTO95613 3336 aa35.67■■■■□ 3.3
CMC4-202ENST00000369484 CACNA1SQ13698 1873 aa35.67■■■■□ 3.3
CMC4-202ENST00000369484 CFAP53Q96M91 514 aa35.67■■■■□ 3.3
CMC4-202ENST00000369484 TBC1D2BQ9UPU7 963 aa35.67■■■■□ 3.3
CMC4-202ENST00000369484 ZNF330Q9Y3S2 320 aaPredicted RBP35.66■■■■□ 3.3
CMC4-202ENST00000369484 A1BGP04217 495 aa35.64■■■■□ 3.3
CMC4-202ENST00000369484 PDZRN3Q9UPQ7 1066 aa35.64■■■■□ 3.3
CMC4-202ENST00000369484 ARFGEF2Q9Y6D5 1785 aa35.64■■■■□ 3.3
CMC4-202ENST00000369484 BTBD11A6QL63 1104 aa35.63■■■■□ 3.29
CMC4-202ENST00000369484 NFKBIEO00221 500 aa35.63■■■■□ 3.29
CMC4-202ENST00000369484 KCNQ3O43525 872 aa35.63■■■■□ 3.29
CMC4-202ENST00000369484 PRR5LQ6MZQ0 368 aa35.63■■■■□ 3.29
CMC4-202ENST00000369484 BRIP1Q9BX63 1249 aa35.63■■■■□ 3.29
CMC4-202ENST00000369484 CAMTA2O94983 1202 aa35.61■■■■□ 3.29
CMC4-202ENST00000369484 PDE6BP35913 854 aa35.6■■■■□ 3.29
CMC4-202ENST00000369484 NUDCQ9Y266 331 aa35.6■■■■□ 3.29
CMC4-202ENST00000369484 GLTPD2A6NH11 291 aa35.59■■■■□ 3.29
CMC4-202ENST00000369484 SLX4Q8IY92 1834 aa35.59■■■■□ 3.29
CMC4-202ENST00000369484 NPM2Q86SE8 214 aaKnown RBP35.58■■■■□ 3.29
CMC4-202ENST00000369484 PPP2R1AP30153 589 aa35.57■■■■□ 3.28
CMC4-202ENST00000369484 CCDC24Q8N4L8 307 aa35.57■■■■□ 3.28
CMC4-202ENST00000369484 ZNF622Q969S3 477 aaKnown RBP eCLIP35.57■■■■□ 3.28
CMC4-202ENST00000369484 SETDB2Q96T68 719 aa35.56■■■■□ 3.28
CMC4-202ENST00000369484 U2AF1L5P0DN76 240 aaPredicted RBP35.55■■■■□ 3.28
CMC4-202ENST00000369484 HTRA3P83110 453 aa35.55■■■■□ 3.28
CMC4-202ENST00000369484 U2AF1Q01081 240 aaKnown RBP eCLIP35.55■■■■□ 3.28
CMC4-202ENST00000369484 CNBD1Q8NA66 436 aa35.55■■■■□ 3.28
CMC4-202ENST00000369484 SMC1BQ8NDV3 1235 aa35.55■■■■□ 3.28
CMC4-202ENST00000369484 USP16Q9Y5T5 823 aa35.55■■■■□ 3.28
CMC4-202ENST00000369484 DLG5Q8TDM6 1919 aa35.54■■■■□ 3.28
CMC4-202ENST00000369484 DZIP3Q86Y13 1208 aaKnown RBP35.54■■■■□ 3.28
CMC4-202ENST00000369484 VEGFAP15692 232 aaPredicted RBP35.53■■■■□ 3.28
CMC4-202ENST00000369484 KLRG1Q96E93 195 aa35.53■■■■□ 3.28
CMC4-202ENST00000369484 MCM10Q7L590 875 aa35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms