RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 ZNF592Q92610 1267 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 NUP62CLQ9H1M0 184 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 CBX8Q9HC52 389 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 RUFY3Q7L099 469 aa19.25■□□□□ 0.67
CHD1L-203ENST00000369259 STAP2Q9UGK3 403 aa19.25■□□□□ 0.67
CHD1L-203ENST00000369259 ZNF215Q9UL58 517 aaPredicted RBP19.25■□□□□ 0.67
CHD1L-203ENST00000369259 MTMR6Q9Y217 621 aa19.25■□□□□ 0.67
CHD1L-203ENST00000369259 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
CHD1L-203ENST00000369259 SLFNL1Q499Z3 407 aa19.25■□□□□ 0.67
CHD1L-203ENST00000369259 STK26Q9P289 416 aa19.25■□□□□ 0.67
CHD1L-203ENST00000369259 RBM6P78332 1123 aaKnown RBP19.24■□□□□ 0.67
CHD1L-203ENST00000369259 FBXO38Q6PIJ6 1188 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
CHD1L-203ENST00000369259 IL25Q9H293 177 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 NPATQ14207 1427 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 CAPN2P17655 700 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 PLCD3Q8N3E9 789 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 SNX14Q9Y5W7 946 aa19.24■□□□□ 0.67
CHD1L-203ENST00000369259 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
CHD1L-203ENST00000369259 MINK1Q8N4C8 1332 aaPredicted RBP19.23■□□□□ 0.67
CHD1L-203ENST00000369259 ANO6Q4KMQ2 910 aa19.23■□□□□ 0.67
CHD1L-203ENST00000369259 AEBP1Q8IUX7 1158 aa19.23■□□□□ 0.67
CHD1L-203ENST00000369259 ERO1AQ96HE7 468 aa19.23■□□□□ 0.67
CHD1L-203ENST00000369259 TUBGCP6Q96RT7 1819 aa19.23■□□□□ 0.67
CHD1L-203ENST00000369259 GJB2P29033 226 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 CAMK4Q16566 473 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
CHD1L-203ENST00000369259 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
CHD1L-203ENST00000369259 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
CHD1L-203ENST00000369259 CLIP2Q9UDT6 1046 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 RAD50Q92878 1312 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 KIF1BPQ96EK5 621 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 TSPYL1Q9H0U9 437 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 FRMPD1Q5SYB0 1578 aa19.22■□□□□ 0.67
CHD1L-203ENST00000369259 GNAI2P04899 355 aa19.21■□□□□ 0.67
CHD1L-203ENST00000369259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.21■□□□□ 0.672e-7■■■■□ 20.7
CHD1L-203ENST00000369259 PTPN14Q15678 1187 aa19.21■□□□□ 0.67
CHD1L-203ENST00000369259 CABP1Q9NZU7 370 aa19.21■□□□□ 0.67
CHD1L-203ENST00000369259 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHD1L-203ENST00000369259 EMILIN1Q9Y6C2 1016 aa19.21■□□□□ 0.67
CHD1L-203ENST00000369259 V9GYY5 206 aaPredicted RBP19.21■□□□□ 0.67
CHD1L-203ENST00000369259 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
CHD1L-203ENST00000369259 LIG1P18858 919 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CDC25BP30305 580 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CCT4P50991 539 aaKnown RBP19.2■□□□□ 0.66
CHD1L-203ENST00000369259 ELF2Q15723 593 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 NOL10Q9BSC4 688 aaKnown RBP19.2■□□□□ 0.66
CHD1L-203ENST00000369259 TNMDQ9H2S6 317 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 YTHDC2Q9H6S0 1430 aaKnown RBP19.2■□□□□ 0.66
CHD1L-203ENST00000369259 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CYP2C19P33261 490 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 NYAP1Q6ZVC0 841 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CKAP2LQ8IYA6 745 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 ST7Q9NRC1 585 aa19.2■□□□□ 0.66
CHD1L-203ENST00000369259 CHL1O00533 1208 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 TTC6Q86TZ1 520 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 CCDC83Q8IWF9 413 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 CHMP3Q9Y3E7 222 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 AOX1Q06278 1338 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 NEMFO60524 1076 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 KRT85P78386 507 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 RNF20Q5VTR2 975 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 SLC4A10Q6U841 1118 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 LRRC8AQ8IWT6 810 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 DLG5Q8TDM6 1919 aa19.19■□□□□ 0.66
CHD1L-203ENST00000369259 VPS37CA5D8V6 355 aaPredicted RBP19.18■□□□□ 0.66
CHD1L-203ENST00000369259 LARGE1O95461 756 aa19.18■□□□□ 0.66
CHD1L-203ENST00000369259 BMS1Q14692 1282 aaKnown RBP19.18■□□□□ 0.66
CHD1L-203ENST00000369259 RASEFQ8IZ41 740 aa19.18■□□□□ 0.66
CHD1L-203ENST00000369259 ZNF446Q9NWS9 450 aa19.18■□□□□ 0.66
CHD1L-203ENST00000369259 ELP1O95163 1332 aa19.18■□□□□ 0.66
CHD1L-203ENST00000369259 USP27XA6NNY8 438 aa19.18■□□□□ 0.66
CHD1L-203ENST00000369259 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
CHD1L-203ENST00000369259 SGSM2O43147 1006 aa19.17■□□□□ 0.66
CHD1L-203ENST00000369259 SLU7O95391 586 aaKnown RBP19.17■□□□□ 0.66
CHD1L-203ENST00000369259 RBM43Q6ZSC3 357 aaKnown RBP19.17■□□□□ 0.66
CHD1L-203ENST00000369259 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
CHD1L-203ENST00000369259 HYPKQ9NX55 129 aa19.17■□□□□ 0.66
CHD1L-203ENST00000369259 DACT1Q9NYF0 836 aa19.17■□□□□ 0.66
CHD1L-203ENST00000369259 MAPK8IP2Q13387 824 aaPredicted RBP19.17■□□□□ 0.66
CHD1L-203ENST00000369259 LSG1Q9H089 658 aaKnown RBP19.17■□□□□ 0.66
CHD1L-203ENST00000369259 CLTCQ00610 1675 aaKnown RBP19.16■□□□□ 0.66
CHD1L-203ENST00000369259 ZNF165P49910 485 aa19.16■□□□□ 0.66
CHD1L-203ENST00000369259 HNRNPH2P55795 449 aaKnown RBP19.16■□□□□ 0.66
CHD1L-203ENST00000369259 ZSCAN31Q96LW9 406 aaPredicted RBP19.16■□□□□ 0.66
CHD1L-203ENST00000369259 CDK19Q9BWU1 502 aa19.16■□□□□ 0.66
CHD1L-203ENST00000369259 DDX19AQ9NUU7 478 aaKnown RBP19.16■□□□□ 0.66
CHD1L-203ENST00000369259 NEXMIFQ5QGS0 1516 aa19.16■□□□□ 0.66
CHD1L-203ENST00000369259 PTPRMP28827 1452 aa19.16■□□□□ 0.66
CHD1L-203ENST00000369259 ERBB3P21860 1342 aa19.15■□□□□ 0.66
CHD1L-203ENST00000369259 F6X3S4 739 aa19.15■□□□□ 0.66
CHD1L-203ENST00000369259 ATP8B2P98198 1209 aa19.15■□□□□ 0.66
CHD1L-203ENST00000369259 PNMA6EA0A0J9YXQ4 647 aa19.15■□□□□ 0.66
CHD1L-203ENST00000369259 SH2B1Q9NRF2 756 aaPredicted RBP19.15■□□□□ 0.66
CHD1L-203ENST00000369259 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
CHD1L-203ENST00000369259 CASTP20810 708 aaKnown RBP19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms