RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CREBRFQ8IUR6 639 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 SPRYD3Q8NCJ5 442 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 GOLGA6L9A6NEM1 432 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 DYNC1I1O14576 645 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 GSDMDP57764 484 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 ABTB2Q8N961 1025 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 ERCC4Q92889 916 aaPredicted RBP8.65□□□□□ -1.02
VTA1-202ENST00000367630 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
VTA1-202ENST00000367630 ZFYP08048 801 aaPredicted RBP8.65□□□□□ -1.03
VTA1-202ENST00000367630 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.03
VTA1-202ENST00000367630 DNAAF4Q8WXU2 420 aa8.65□□□□□ -1.03
VTA1-202ENST00000367630 TM6SF1Q9BZW5 370 aa8.65□□□□□ -1.03
VTA1-202ENST00000367630 MROH2AA6NES4 1674 aa8.65□□□□□ -1.03
VTA1-202ENST00000367630 ATF3P18847 181 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 NUTM2DQ5VT03 806 aaPredicted RBP8.64□□□□□ -1.03
VTA1-202ENST00000367630 BLOC1S2Q6QNY1 142 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 OLFM4Q6UX06 510 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 PTPRMP28827 1452 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 FLIIQ13045 1269 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 DNAJC5BQ9UF47 199 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 BAG4O95429 457 aaKnown RBP8.64□□□□□ -1.03
VTA1-202ENST00000367630 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 TRIM35Q9UPQ4 493 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 ZNF853P0CG23 659 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 AKAP17AQ02040 695 aaKnown RBP8.64□□□□□ -1.03
VTA1-202ENST00000367630 CYB5RLQ6IPT4 315 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 ERICH2A1L162 156 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 KINO60870 393 aaKnown RBP8.64□□□□□ -1.03
VTA1-202ENST00000367630 CCDC158Q5M9N0 1113 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 ECHDC1Q9NTX5 307 aa8.64□□□□□ -1.03
VTA1-202ENST00000367630 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 ACEP12821 1306 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 RALYLQ86SE5 291 aaKnown RBP8.63□□□□□ -1.03
VTA1-202ENST00000367630 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 ARXQ96QS3 562 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 ESYT1Q9BSJ8 1104 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 TMEM131LA2VDJ0 1609 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 CPLX1O14810 134 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
VTA1-202ENST00000367630 CEP85Q6P2H3 762 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
VTA1-202ENST00000367630 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
VTA1-202ENST00000367630 BMP15O95972 392 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 SLC3A2P08195 630 aaKnown RBP8.62□□□□□ -1.03
VTA1-202ENST00000367630 TTF1Q15361 905 aaPredicted RBP8.62□□□□□ -1.03
VTA1-202ENST00000367630 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
VTA1-202ENST00000367630 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 HOXA7P31268 230 aaPredicted RBP8.62□□□□□ -1.03
VTA1-202ENST00000367630 BICD2Q8TD16 824 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 NUP62CLQ9H1M0 184 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 FBXO3Q9UK99 471 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 CCDC171Q6TFL3 1326 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 CEP57L1Q8IYX8 460 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 PDCL3Q9H2J4 239 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 USP6P35125 1406 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 PDE1AP54750 535 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 ANKRD24Q8TF21 1146 aa8.62□□□□□ -1.03
VTA1-202ENST00000367630 RGS12O14924 1447 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 NME9Q86XW9 330 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 PRPF40AO75400 957 aaKnown RBP8.61□□□□□ -1.03
VTA1-202ENST00000367630 ANO10Q9NW15 660 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 PAXBP1Q9Y5B6 917 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 CCDC178Q5BJE1 867 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 USP26Q9BXU7 913 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 APBB1O00213 710 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 IGSF3O75054 1194 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 MCM3P25205 808 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 PLCB2Q00722 1185 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 EIF4A2Q14240 407 aaKnown RBP8.61□□□□□ -1.03
VTA1-202ENST00000367630 PKNOX2Q96KN3 472 aa8.61□□□□□ -1.03
VTA1-202ENST00000367630 SENP3-EIF4A1A0A087X0R7 540 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 SMARCE1Q969G3 411 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
VTA1-202ENST00000367630 KANK3Q6NY19 840 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 WAPLQ7Z5K2 1190 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 SRGAP3O43295 1099 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 NACAP1Q9BZK3 213 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 TSPYL1Q9H0U9 437 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 CARMIL3Q8ND23 1372 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
VTA1-202ENST00000367630 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 CCDC150Q8NCX0 1101 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 TNMDQ9H2S6 317 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 TUBBP07437 444 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms