RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 KDRP35968 1356 aa13.63□□□□□ -0.23
NUP43-203ENST00000367404 PHF14O94880 888 aa13.63□□□□□ -0.23
NUP43-203ENST00000367404 ITPK1Q13572 414 aa13.63□□□□□ -0.23
NUP43-203ENST00000367404 SMIM5Q71RC9 77 aa13.63□□□□□ -0.23
NUP43-203ENST00000367404 EYA1Q99502 592 aa13.63□□□□□ -0.23
NUP43-203ENST00000367404 PHKG2P15735 406 aa13.62□□□□□ -0.23
NUP43-203ENST00000367404 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
NUP43-203ENST00000367404 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
NUP43-203ENST00000367404 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
NUP43-203ENST00000367404 IFNL2Q8IZJ0 200 aa13.61□□□□□ -0.23
NUP43-203ENST00000367404 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
NUP43-203ENST00000367404 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
NUP43-203ENST00000367404 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
NUP43-203ENST00000367404 GNPATO15228 680 aa13.6□□□□□ -0.23
NUP43-203ENST00000367404 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
NUP43-203ENST00000367404 C10orf71Q711Q0 1435 aa13.59□□□□□ -0.23
NUP43-203ENST00000367404 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
NUP43-203ENST00000367404 HSPA6P17066 643 aa13.59□□□□□ -0.23
NUP43-203ENST00000367404 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
NUP43-203ENST00000367404 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
NUP43-203ENST00000367404 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
NUP43-203ENST00000367404 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
NUP43-203ENST00000367404 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
NUP43-203ENST00000367404 EIF4A2Q14240 407 aaKnown RBP13.58□□□□□ -0.24
NUP43-203ENST00000367404 LCE2DQ5TA82 110 aaPredicted RBP13.58□□□□□ -0.24
NUP43-203ENST00000367404 MMP10P09238 476 aa13.57□□□□□ -0.24
NUP43-203ENST00000367404 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
NUP43-203ENST00000367404 KIF13BQ9NQT8 1826 aa13.56□□□□□ -0.24
NUP43-203ENST00000367404 KIF3CO14782 793 aa13.56□□□□□ -0.24
NUP43-203ENST00000367404 ZNF526Q8TF50 670 aaPredicted RBP13.56□□□□□ -0.24
NUP43-203ENST00000367404 WWC3Q9ULE0 1092 aa13.56□□□□□ -0.24
NUP43-203ENST00000367404 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
NUP43-203ENST00000367404 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
NUP43-203ENST00000367404 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
NUP43-203ENST00000367404 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
NUP43-203ENST00000367404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
NUP43-203ENST00000367404 TGFB2P61812 414 aa13.54□□□□□ -0.24
NUP43-203ENST00000367404 RC3H1Q5TC82 1133 aaKnown RBP13.54□□□□□ -0.24
NUP43-203ENST00000367404 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
NUP43-203ENST00000367404 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
NUP43-203ENST00000367404 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
NUP43-203ENST00000367404 DCAF5Q96JK2 942 aa13.54□□□□□ -0.24
NUP43-203ENST00000367404 ZFP91Q96JP5 570 aaPredicted RBP13.54□□□□□ -0.24
NUP43-203ENST00000367404 RTCBQ9Y3I0 505 aaKnown RBP13.54□□□□□ -0.24
NUP43-203ENST00000367404 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
NUP43-203ENST00000367404 POTEMA6NI47 508 aa13.53□□□□□ -0.24
NUP43-203ENST00000367404 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
NUP43-203ENST00000367404 GYS1P13807 737 aa13.53□□□□□ -0.24
NUP43-203ENST00000367404 TRAPPC3LQ5T215 181 aa13.53□□□□□ -0.24
NUP43-203ENST00000367404 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
NUP43-203ENST00000367404 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
NUP43-203ENST00000367404 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
NUP43-203ENST00000367404 ARHGEF1Q92888 912 aaKnown RBP13.52□□□□□ -0.25
NUP43-203ENST00000367404 RPS6KA4O75676 772 aa13.51□□□□□ -0.25
NUP43-203ENST00000367404 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
NUP43-203ENST00000367404 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
NUP43-203ENST00000367404 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
NUP43-203ENST00000367404 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
NUP43-203ENST00000367404 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
NUP43-203ENST00000367404 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
NUP43-203ENST00000367404 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
NUP43-203ENST00000367404 CCDC87Q9NVE4 849 aa13.5□□□□□ -0.25
NUP43-203ENST00000367404 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
NUP43-203ENST00000367404 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
NUP43-203ENST00000367404 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
NUP43-203ENST00000367404 DPEP1P16444 411 aa13.49□□□□□ -0.25
NUP43-203ENST00000367404 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
NUP43-203ENST00000367404 KCNA3P22001 575 aa13.48□□□□□ -0.25
NUP43-203ENST00000367404 RFC4P35249 363 aa13.48□□□□□ -0.25
NUP43-203ENST00000367404 PARP3Q9Y6F1 533 aa13.48□□□□□ -0.25
NUP43-203ENST00000367404 TOMM70O94826 608 aa13.47□□□□□ -0.25
NUP43-203ENST00000367404 APLP1P51693 650 aa13.47□□□□□ -0.25
NUP43-203ENST00000367404 CABP4P57796 275 aa13.47□□□□□ -0.25
NUP43-203ENST00000367404 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
NUP43-203ENST00000367404 N4BP2Q86UW6 1770 aaPredicted RBP13.47□□□□□ -0.25
NUP43-203ENST00000367404 TJP1Q07157 1748 aa13.47□□□□□ -0.25
NUP43-203ENST00000367404 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.25
NUP43-203ENST00000367404 USP42Q9H9J4 1324 aaKnown RBP13.46□□□□□ -0.25
NUP43-203ENST00000367404 FCHSD2O94868 740 aa13.46□□□□□ -0.25
NUP43-203ENST00000367404 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
NUP43-203ENST00000367404 PANK3Q9H999 370 aa13.46□□□□□ -0.25
NUP43-203ENST00000367404 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 MRC1P22897 1456 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 MTHFSP49914 203 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 DDR1Q08345 913 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 C3orf67Q6ZVT6 689 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 NMRK2Q9NPI5 230 aa13.45□□□□□ -0.26
NUP43-203ENST00000367404 MYH14Q7Z406 1995 aaKnown RBP13.44□□□□□ -0.26
NUP43-203ENST00000367404 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
NUP43-203ENST00000367404 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
NUP43-203ENST00000367404 DNAJC5GQ8N7S2 189 aa13.44□□□□□ -0.26
NUP43-203ENST00000367404 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
NUP43-203ENST00000367404 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
NUP43-203ENST00000367404 IL13P35225 146 aa13.43□□□□□ -0.26
NUP43-203ENST00000367404 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
NUP43-203ENST00000367404 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
NUP43-203ENST00000367404 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
NUP43-203ENST00000367404 PIM2Q9P1W9 311 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms