RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
MRPL55-215ENST00000366742 TRIM35Q9UPQ4 493 aa20.5■□□□□ 0.87
MRPL55-215ENST00000366742 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
MRPL55-215ENST00000366742 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
MRPL55-215ENST00000366742 FHDC1Q9C0D6 1143 aaPredicted RBP20.49■□□□□ 0.87
MRPL55-215ENST00000366742 MRS2Q9HD23 443 aa20.49■□□□□ 0.87
MRPL55-215ENST00000366742 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
MRPL55-215ENST00000366742 RFC4P35249 363 aa20.48■□□□□ 0.87
MRPL55-215ENST00000366742 SNRPA1P09661 255 aaKnown RBP20.47■□□□□ 0.87
MRPL55-215ENST00000366742 GYS1P13807 737 aa20.47■□□□□ 0.87
MRPL55-215ENST00000366742 SYT17Q9BSW7 474 aa20.47■□□□□ 0.87
MRPL55-215ENST00000366742 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
MRPL55-215ENST00000366742 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
MRPL55-215ENST00000366742 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
MRPL55-215ENST00000366742 APAF1O14727 1248 aa20.46■□□□□ 0.87
MRPL55-215ENST00000366742 EIF4A1P60842 406 aaKnown RBP20.46■□□□□ 0.87
MRPL55-215ENST00000366742 SRP68Q9UHB9 627 aaKnown RBP20.46■□□□□ 0.87
MRPL55-215ENST00000366742 USP42Q9H9J4 1324 aaKnown RBP20.46■□□□□ 0.87
MRPL55-215ENST00000366742 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
MRPL55-215ENST00000366742 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
MRPL55-215ENST00000366742 A1BGP04217 495 aa20.44■□□□□ 0.86
MRPL55-215ENST00000366742 NLGN1Q8N2Q7 840 aa20.44■□□□□ 0.86
MRPL55-215ENST00000366742 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
MRPL55-215ENST00000366742 COL15A1P39059 1388 aa20.44■□□□□ 0.86
MRPL55-215ENST00000366742 GIGYF1O75420 1035 aaPredicted RBP20.42■□□□□ 0.86
MRPL55-215ENST00000366742 MMP10P09238 476 aa20.42■□□□□ 0.86
MRPL55-215ENST00000366742 TSPYL4Q9UJ04 414 aa20.42■□□□□ 0.86
MRPL55-215ENST00000366742 CHL1O00533 1208 aa20.41■□□□□ 0.86
MRPL55-215ENST00000366742 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
MRPL55-215ENST00000366742 FKBP8Q14318 412 aa20.41■□□□□ 0.86
MRPL55-215ENST00000366742 NARFQ9UHQ1 456 aa20.41■□□□□ 0.86
MRPL55-215ENST00000366742 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
MRPL55-215ENST00000366742 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
MRPL55-215ENST00000366742 ZPR1O75312 459 aa20.39■□□□□ 0.85
MRPL55-215ENST00000366742 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
MRPL55-215ENST00000366742 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
MRPL55-215ENST00000366742 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
MRPL55-215ENST00000366742 A0A087WZG4 1122 aa20.38■□□□□ 0.85
MRPL55-215ENST00000366742 PIP4K2AP48426 406 aaPredicted RBP20.38■□□□□ 0.85
MRPL55-215ENST00000366742 KLHL34Q8N239 644 aa20.38■□□□□ 0.85
MRPL55-215ENST00000366742 NLGN2Q8NFZ4 835 aa20.38■□□□□ 0.85
MRPL55-215ENST00000366742 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
MRPL55-215ENST00000366742 TM4SF1P30408 202 aa20.37■□□□□ 0.85
MRPL55-215ENST00000366742 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
MRPL55-215ENST00000366742 DDR1Q08345 913 aa20.36■□□□□ 0.85
MRPL55-215ENST00000366742 LAMB4A4D0S4 1761 aa20.36■□□□□ 0.85
MRPL55-215ENST00000366742 CFAP44Q96MT7 982 aa20.35■□□□□ 0.85
MRPL55-215ENST00000366742 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
MRPL55-215ENST00000366742 ZNF330Q9Y3S2 320 aaPredicted RBP20.35■□□□□ 0.85
MRPL55-215ENST00000366742 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
MRPL55-215ENST00000366742 CCDC27Q2M243 656 aa20.34■□□□□ 0.85
MRPL55-215ENST00000366742 LAS1LQ9Y4W2 734 aaKnown RBP20.34■□□□□ 0.85
MRPL55-215ENST00000366742 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
MRPL55-215ENST00000366742 POLRMTO00411 1230 aaKnown RBP20.33■□□□□ 0.85
MRPL55-215ENST00000366742 NFIXQ14938 502 aa20.33■□□□□ 0.85
MRPL55-215ENST00000366742 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.85
MRPL55-215ENST00000366742 PARP3Q9Y6F1 533 aa20.33■□□□□ 0.85
MRPL55-215ENST00000366742 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
MRPL55-215ENST00000366742 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
MRPL55-215ENST00000366742 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
MRPL55-215ENST00000366742 C10orf71Q711Q0 1435 aa20.32■□□□□ 0.84
MRPL55-215ENST00000366742 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
MRPL55-215ENST00000366742 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
MRPL55-215ENST00000366742 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
MRPL55-215ENST00000366742 SCN7AQ01118 1682 aa20.31■□□□□ 0.84
MRPL55-215ENST00000366742 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
MRPL55-215ENST00000366742 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
MRPL55-215ENST00000366742 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
MRPL55-215ENST00000366742 GNAI1P63096 354 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 PDIA6Q15084 440 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 TBC1D9BQ66K14 1250 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 UTRNP46939 3433 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 KIF13BQ9NQT8 1826 aa20.29■□□□□ 0.84
MRPL55-215ENST00000366742 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
MRPL55-215ENST00000366742 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
MRPL55-215ENST00000366742 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
MRPL55-215ENST00000366742 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 RGL2O15211 777 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 SERPINB2P05120 415 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 HOXB7P09629 217 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 MYL6BP14649 208 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 TGFB2P61812 414 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 BICDL1Q6ZP65 573 aa20.26■□□□□ 0.83
MRPL55-215ENST00000366742 KIAA1551Q9HCM1 1747 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 CCER2I3L3R5 266 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 DUSP27Q5VZP5 1158 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 TTLL7Q6ZT98 887 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
MRPL55-215ENST00000366742 YBX3P16989 372 aaKnown RBP eCLIP20.24■□□□□ 0.832e-6■□□□□ 10.7
MRPL55-215ENST00000366742 HLFQ16534 295 aa20.24■□□□□ 0.83
MRPL55-215ENST00000366742 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
MRPL55-215ENST00000366742 IL16Q14005 1332 aa20.24■□□□□ 0.83
MRPL55-215ENST00000366742 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
MRPL55-215ENST00000366742 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
MRPL55-215ENST00000366742 ANXA1P04083 346 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms